Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-27 03:27:11 (16056): vboxwrapper version 26210
2026-03-27 03:27:11 (16056): BOINC client version: 7.16.5
2026-03-27 03:27:11 (16056): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-03-27 03:27:11 (16056): Successfully copied 'init_data.xml' to the shared directory.
2026-03-27 03:27:12 (16056): Create VM. (boinc_035687ea95ff48c5, slot#2)
2026-03-27 03:27:12 (16056): Setting Memory Size for VM. (4400MB)
2026-03-27 03:27:12 (16056): Setting CPU Count for VM. (4)
2026-03-27 03:27:13 (16056): Setting Chipset Options for VM.
2026-03-27 03:27:13 (16056): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-27 03:27:13 (16056): Setting Boot Options for VM.
2026-03-27 03:27:14 (16056): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-27 03:27:14 (16056): Enabling VM Network Access.
2026-03-27 03:27:14 (16056): Disabling USB Support for VM.
2026-03-27 03:27:14 (16056): Disabling COM Port Support for VM.
2026-03-27 03:27:15 (16056): Disabling LPT Port Support for VM.
2026-03-27 03:27:15 (16056): Disabling Audio Support for VM.
2026-03-27 03:27:15 (16056): Disabling Clipboard Support for VM.
2026-03-27 03:27:15 (16056): Disabling Drag and Drop Support for VM.
2026-03-27 03:27:16 (16056): Adding storage controller(s) to VM.
2026-03-27 03:27:16 (16056): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-27 03:27:16 (16056): Adding VirtualBox Guest Additions to VM.
2026-03-27 03:27:17 (16056): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-27 03:27:17 (16056): forwarding host port 53427 to guest port 80
2026-03-27 03:27:17 (16056): Enabling remote desktop for VM.
2026-03-27 03:27:18 (16056): Enabling shared directory for VM.
2026-03-27 03:27:18 (16056): Starting VM using VBoxManage interface. (boinc_035687ea95ff48c5, slot#2)
2026-03-27 03:27:22 (16056): Successfully started VM. (PID = '12776')
2026-03-27 03:27:22 (16056): Reporting VM Process ID to BOINC.
2026-03-27 03:27:22 (16056): Guest Log: BIOS: VirtualBox 5.2.44
2026-03-27 03:27:22 (16056): Guest Log: CPUID EDX: 0x178bfbff
2026-03-27 03:27:22 (16056): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-27 03:27:22 (16056): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-27 03:27:22 (16056): Detected: Web Application Enabled (http://localhost:53427)
2026-03-27 03:27:22 (16056): Detected: Remote Desktop Enabled (localhost:53428)
2026-03-27 03:27:22 (16056): Preference change detected
2026-03-27 03:27:22 (16056): Setting CPU throttle for VM. (100%)
2026-03-27 03:27:23 (16056): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-27 03:27:24 (16056): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-27 03:27:24 (16056): Guest Log: BIOS: Booting from Hard Disk...
2026-03-27 03:27:27 (16056): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-27 03:27:27 (16056): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-27 03:27:27 (16056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-27 03:27:33 (16056): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-27 03:27:33 (16056): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-27 03:27:39 (16056): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-27 03:27:39 (16056): Guest Log: 00:00:00.000133 main     Log opened 2026-03-27T03:27:37.321738000Z
2026-03-27 03:27:39 (16056): Guest Log: 00:00:00.000218 main     OS Product: Linux
2026-03-27 03:27:39 (16056): Guest Log: 00:00:00.000242 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-27 03:27:39 (16056): Guest Log: 00:00:00.000262 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-27 03:27:39 (16056): Guest Log: 00:00:00.000288 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-27 03:27:39 (16056): Guest Log: 00:00:00.000289 main     Process ID: 1308
2026-03-27 03:27:39 (16056): Guest Log: 00:00:00.000290 main     Package type: LINUX_64BITS_GENERIC
2026-03-27 03:27:39 (16056): Guest Log: 00:00:00.001355 main     5.2.32 r132073 started. Verbose level = 0
2026-03-27 03:27:39 (16056): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-27 03:27:39 (16056): Guest Log: [INFO] Mounting shared directory
2026-03-27 03:27:39 (16056): Guest Log: [INFO] Checking for init_data.xml
2026-03-27 03:27:46 (16056): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-27 03:27:46 (16056): Guest Log: [INFO] Detected branch: prod
2026-03-27 03:27:47 (16056): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-27 03:27:47 (16056): Guest Log: Copying input files
2026-03-27 03:27:49 (16056): Guest Log: Copied input files into RunAtlas.
2026-03-27 03:27:49 (16056): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-27 03:27:49 (16056): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-27 03:27:49 (16056): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-27 03:27:49 (16056): Guest Log: Further information can be found at the LHC@home message board.
2026-03-27 03:27:49 (16056): Guest Log: 00:00:10.003533 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 276 315 000ns (GuestNow=1 774 574 869 047 899 000 ns GuestLast=1 774 582 057 324 214 000 ns fSetTimeLastLoop=true )
2026-03-27 03:27:59 (16056): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-27 03:27:59 (16056): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-27 03:27:59 (16056): Guest Log: 2.6.3.0 1585 0 30172 157741 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-27 03:28:00 (16056): Guest Log: copied the webapp to /var/www
2026-03-27 03:28:00 (16056): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-27 03:28:00 (16056): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-27 03:28:00 (16056): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-27 03:28:00 (16056): Guest Log:  *** Starting ATLAS job. (PandaID=7056950282 taskID=49176543) ***
2026-03-27 05:07:25 (16056): Status Report: Elapsed Time: '6000.000000'
2026-03-27 05:07:25 (16056): Status Report: CPU Time: '21591.468750'
2026-03-27 06:47:28 (16056): Status Report: Elapsed Time: '12000.000000'
2026-03-27 06:47:28 (16056): Status Report: CPU Time: '45015.687500'
2026-03-27 08:27:31 (16056): Status Report: Elapsed Time: '18000.000000'
2026-03-27 08:27:31 (16056): Status Report: CPU Time: '68333.140625'
2026-03-27 09:05:26 (16056): Guest Log:  *** Job finished ***
2026-03-27 09:05:26 (16056): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:04:58,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:04:58,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:17,702 | INFO     | [monitor] cgroup control has ended
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:18,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914330380096)>', '<ExcThread(monitor, started 139913500542720)>']
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:19,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:19,012 | INFO     | [monitor] control thread has ended
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:23,979 | INFO     | all workflow threads have been joined
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:23,979 | INFO     | end of generic workflow (traces error code: 0)
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:23,980 | INFO     | traces error code: 0
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:23,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:24,087 [wrapper] ==== pilot stdout END ====
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:24,092 [wrapper] ==== wrapper stdout RESUME ====
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:24,097 [wrapper] pilotpid: 5988
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:24,102 [wrapper] Pilot exit status: 0
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:24,146 [wrapper] pandaids: 7056950282
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:24,178 [wrapper] cleanup supervisor_pilot 29787 5989
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:24,185 [wrapper] Test setup, not cleaning
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:24,190 [wrapper] apfmon messages muted
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:24,194 [wrapper] ==== wrapper stdout END ====
2026-03-27 09:05:26 (16056): Guest Log: 2026-03-27 07:05:24,198 [wrapper] ==== wrapper stderr END ====
2026-03-27 09:05:26 (16056): Guest Log:  *** Error codes and diagnostics ***
2026-03-27 09:05:26 (16056): Guest Log:     "exeErrorCode": 0,
2026-03-27 09:05:26 (16056): Guest Log:     "exeErrorDiag": "",
2026-03-27 09:05:26 (16056): Guest Log:     "pilotErrorCode": 0,
2026-03-27 09:05:26 (16056): Guest Log:     "pilotErrorDiag": "",
2026-03-27 09:05:26 (16056): Guest Log:  *** Listing of results directory ***
2026-03-27 09:05:26 (16056): Guest Log: total 204656
2026-03-27 09:05:26 (16056): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 16 15:03 pilot3.tar.gz
2026-03-27 09:05:26 (16056): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 16 15:07 runpilot2-wrapper.sh
2026-03-27 09:05:26 (16056): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 16 15:09 queuedata.json
2026-03-27 09:05:26 (16056): Guest Log: -rwxr-xr-x. 1 atlas atlas      8898 Mar 27 01:27 init_data.xml
2026-03-27 09:05:26 (16056): Guest Log: -rwxr-xr-x. 1 atlas atlas    597543 Mar 27 01:27 input.tar.gz
2026-03-27 09:05:26 (16056): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 27 01:27 start_atlas.sh
2026-03-27 09:05:26 (16056): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 27 01:27 EVNT.49134319._000003.pool.root.1 -> /data/./ATLAS.root_0
2026-03-27 09:05:26 (16056): Guest Log: -rw-r--r--. 1 atlas atlas      2624 Mar 27 01:28 pandaJob.out
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas   1012402 Mar 27 01:28 agis_schedconf.cvmfs.json
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas       426 Mar 27 01:28 workernode_map.json
2026-03-27 09:05:26 (16056): Guest Log: drwx------. 5 atlas atlas      4096 Mar 27 01:28 pilot3
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas 199108912 Mar 27 07:03 HITS.49176543._000072.pool.root.1
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas      1044 Mar 27 07:04 memory_monitor_summary.json
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas        95 Mar 27 07:04 pilot_heartbeat.json
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 27 07:04 agis_ddmendpoints.agis.ALL.json
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas    491735 Mar 27 07:04 log.49176543._000072.job.log.tgz.1
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas      6362 Mar 27 07:04 heartbeat.json
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas      4873 Mar 27 07:05 pilotlog.txt
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas   2799114 Mar 27 07:05 log.49176543._000072.job.log.1
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas       357 Mar 27 07:05 output.list
2026-03-27 09:05:26 (16056): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 27 07:05 runtime_log
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas   3307520 Mar 27 07:05 result.tar.gz
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas       670 Mar 27 07:05 TSBMDmsiOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDrxLDmj8m9un.diag
2026-03-27 09:05:26 (16056): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Mar 27 07:05 runtime_log.err
2026-03-27 09:05:26 (16056): Guest Log: Looking for outputfile HITS.49176543._000072.pool.root.1
2026-03-27 09:05:26 (16056): Guest Log: HITS file was successfully produced
2026-03-27 09:05:26 (16056): Guest Log: -rw-------. 1 atlas atlas 199108912 Mar 27 07:03 /home/atlas/RunAtlas/HITS.49176543._000072.pool.root.1
2026-03-27 09:05:27 (16056): Guest Log: Successfully finished the ATLAS job!
2026-03-27 09:05:27 (16056): Guest Log: Copying the results back to the shared directory!
2026-03-27 09:05:27 (16056): Guest Log:  *** Contents of shared directory: ***
2026-03-27 09:05:27 (16056): Guest Log: total 420372
2026-03-27 09:05:27 (16056): Guest Log: -rwxrwxrwx. 1 root root 227410518 Mar 27 01:27 ATLAS.root_0
2026-03-27 09:05:27 (16056): Guest Log: -rwxrwxrwx. 1 root root 199108912 Mar 27 07:05 HITS.pool.root.1
2026-03-27 09:05:27 (16056): Guest Log: -rwxrwxrwx. 1 root root      8898 Mar 27 01:27 init_data.xml
2026-03-27 09:05:27 (16056): Guest Log: -rwxrwxrwx. 1 root root    597543 Mar 24 18:48 input.tar.gz
2026-03-27 09:05:27 (16056): Guest Log: -rwxrwxrwx. 1 root root   3307520 Mar 27 07:05 result.tar.gz
2026-03-27 09:05:27 (16056): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 24 18:48 start_atlas.sh
2026-03-27 09:05:27 (16056): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-27 09:05:27 (16056): VM Completion File Detected.
2026-03-27 09:05:27 (16056): Powering off VM.
2026-03-27 09:05:28 (16056): Successfully stopped VM.
2026-03-27 09:05:28 (16056): Deregistering VM. (boinc_035687ea95ff48c5, slot#2)
2026-03-27 09:05:28 (16056): Removing network bandwidth throttle group from VM.
2026-03-27 09:05:28 (16056): Removing VM from VirtualBox.
2026-03-27 09:05:33 (16056): called boinc_finish(0)

</stderr_txt>
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