Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:39:17 (769795): wrapper (7.7.26015): starting
15:39:17 (769795): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 15:39:17] Arguments: --nthreads 8
[2026-03-24 15:39:17] Threads: 8
[2026-03-24 15:39:17] Checking for CVMFS
[2026-03-24 15:39:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 15:39:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 15:39:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 15:39:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 15:39:20] 2.13.3.0 10276 128374 286916 157655 1 246 38868768 40960001 31089 16776704 0 934714354 99.730 683049566 44557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-24 15:39:20] CVMFS is ok
[2026-03-24 15:39:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 15:39:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 15:39:20] Further information can be found at the LHC@home message board.
[2026-03-24 15:39:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 15:39:20] Checking for apptainer binary...
[2026-03-24 15:39:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 15:39:20] Running /usr/bin/apptainer --version
[2026-03-24 15:39:20] apptainer version 1.4.5-2.el9
[2026-03-24 15:39:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 15:39:20] c-208-36.aglt2.org
[2026-03-24 15:39:20] apptainer works
[2026-03-24 15:39:20] Set ATHENA_PROC_NUMBER=8
[2026-03-24 15:39:20] Set ATHENA_CORE_NUMBER=8
[2026-03-24 15:39:20] Starting ATLAS job with PandaID=7056945189
[2026-03-24 15:39:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 20:50:08]  *** The last 200 lines of the pilot log: ***
[2026-03-24 20:50:08] 2026-03-25 00:49:10,021 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 20:50:08] 2026-03-25 00:49:10,021 | INFO     | log transfer has been attempted: DONE
[2026-03-24 20:50:08] 2026-03-25 00:49:10,022 | INFO     | job 7056945189 has finished - writing final server update
[2026-03-24 20:50:08] 2026-03-25 00:49:10,022 | INFO     | total number of processed events: 400 (read)
[2026-03-24 20:50:08] 2026-03-25 00:49:10,073 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7056945189/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 20:50:08] 2026-03-25 00:49:10,073 | INFO     | extracted standard info from prmon json
[2026-03-24 20:50:08] 2026-03-25 00:49:10,073 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 20:50:08] 2026-03-25 00:49:10,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 20:50:08] 2026-03-25 00:49:10,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 20:50:08] 2026-03-25 00:49:10,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 20:50:08] 2026-03-25 00:49:10,099 | INFO     | fitting pss+swap vs Time
[2026-03-24 20:50:08] 2026-03-25 00:49:10,099 | INFO     | sum of square deviations: 8456156121.667754
[2026-03-24 20:50:08] 2026-03-25 00:49:10,108 | INFO     | sum of deviations: 64238512414.32884
[2026-03-24 20:50:08] 2026-03-25 00:49:10,108 | INFO     | mean x: 1774390574.0332227
[2026-03-24 20:50:08] 2026-03-25 00:49:10,109 | INFO     | mean y: 2499101.8671096344
[2026-03-24 20:50:08] 2026-03-25 00:49:10,109 | INFO     | intersect: -13476936386.064833
[2026-03-24 20:50:08] 2026-03-25 00:49:10,109 | INFO     | chi2: 4.576489711349243
[2026-03-24 20:50:08] 2026-03-25 00:49:10,109 | INFO     | sum of square deviations: 8041714191.662176
[2026-03-24 20:50:08] 2026-03-25 00:49:10,110 | INFO     | sum of deviations: 82873869850.15536
[2026-03-24 20:50:08] 2026-03-25 00:49:10,110 | INFO     | mean x: 1774390421.5337837
[2026-03-24 20:50:08] 2026-03-25 00:49:10,110 | INFO     | mean y: 2505858.3344594594
[2026-03-24 20:50:08] 2026-03-25 00:49:10,110 | INFO     | intersect: -18283471155.125973
[2026-03-24 20:50:08] 2026-03-25 00:49:10,111 | INFO     | chi2: 3.8267919802415142
[2026-03-24 20:50:08] 2026-03-25 00:49:10,111 | INFO     | current chi2=3.8267919802415142 (change=16.38150150864652 %)
[2026-03-24 20:50:08] 2026-03-25 00:49:10,111 | INFO     | right removable region: 295
[2026-03-24 20:50:08] 2026-03-25 00:49:10,111 | INFO     | sum of square deviations: 8041708091.662176
[2026-03-24 20:50:08] 2026-03-25 00:49:10,132 | INFO     | sum of deviations: -30513507281.96621
[2026-03-24 20:50:08] 2026-03-25 00:49:10,132 | INFO     | mean x: 1774390726.5337837
[2026-03-24 20:50:08] 2026-03-25 00:49:10,133 | INFO     | mean y: 2533907.246621622
[2026-03-24 20:50:08] 2026-03-25 00:49:10,133 | INFO     | intersect: 6735293134.266871
[2026-03-24 20:50:08] 2026-03-25 00:49:10,133 | INFO     | chi2: 0.883880161316563
[2026-03-24 20:50:08] 2026-03-25 00:49:10,133 | INFO     | current chi2=0.883880161316563 (change=80.68650391314925 %)
[2026-03-24 20:50:08] 2026-03-25 00:49:10,133 | INFO     | sum of square deviations: 7641027761.656381
[2026-03-24 20:50:08] 2026-03-25 00:49:10,134 | INFO     | sum of deviations: -35323327022.811
[2026-03-24 20:50:08] 2026-03-25 00:49:10,134 | INFO     | mean x: 1774390879.0343642
[2026-03-24 20:50:08] 2026-03-25 00:49:10,134 | INFO     | mean y: 2535709.4810996563
[2026-03-24 20:50:08] 2026-03-25 00:49:10,134 | INFO     | intersect: 8205279010.709082
[2026-03-24 20:50:08] 2026-03-25 00:49:10,135 | INFO     | chi2: 0.8430522114660196
[2026-03-24 20:50:08] 2026-03-25 00:49:10,135 | INFO     | current chi2=0.8430522114660196 (change=4.619172557253584 %)
[2026-03-24 20:50:08] 2026-03-25 00:49:10,135 | INFO     | left removable region: 20
[2026-03-24 20:50:08] 2026-03-25 00:49:10,135 | INFO     | sum of square deviations: 6448685038.70543
[2026-03-24 20:50:08] 2026-03-25 00:49:10,154 | INFO     | sum of deviations: -2992797055.2909093
[2026-03-24 20:50:08] 2026-03-25 00:49:10,154 | INFO     | mean x: 1774391001.0327272
[2026-03-24 20:50:08] 2026-03-25 00:49:10,154 | INFO     | mean y: 2537978.2545454544
[2026-03-24 20:50:08] 2026-03-25 00:49:10,154 | INFO     | intersect: 826022476.4044958
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | chi2: 0.02475596857690663
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | current memory leak: -0.46 B/s (using 275 data points, chi2=0.02)
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | could have reported an average CPU frequency of 3800 MHz (14 samples)
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | ..............................
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | . Timing measurements:
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | . get job = 0 s
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | . initial setup = 35 s
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | . payload setup = 114 s
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | . stage-in = 0 s
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | . payload execution = 18345 s
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | . stage-out = 2 s
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | . log creation = 0 s
[2026-03-24 20:50:08] 2026-03-25 00:49:10,155 | INFO     | ..............................
[2026-03-24 20:50:08] 2026-03-25 00:49:11,114 | INFO     | 
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | job summary report
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | --------------------------------------------------
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | PanDA job id: 7056945189
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | task id: 49178954
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | errors: (none)
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | pilot state: finished 
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | transexitcode: 0
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | exeerrorcode: 0
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | exeerrordiag: 
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | exitcode: 0
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | exitmsg: OK
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | cpuconsumptiontime: 61306 s
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | nevents: 400
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | neventsw: 0
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | pid: 801066
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | pgrp: 801066
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | corecount: 8
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | event service: False
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | sizes: {0: 2279829, 1: 2280346, 2: 2280346, 18464: 2312737, 18467: 2321791, 18468: 2321929}
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | --------------------------------------------------
[2026-03-24 20:50:08] 2026-03-25 00:49:11,115 | INFO     | 
[2026-03-24 20:50:08] 2026-03-25 00:49:11,148 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-24 20:50:08] 2026-03-25 00:49:11,526 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,527 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,527 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,527 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,527 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,527 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,531 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 20:50:08] 2026-03-25 00:49:11,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,531 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 20:50:08] 2026-03-25 00:49:11,531 | INFO     | job 7056945189 has completed (purged errors)
[2026-03-24 20:50:08] 2026-03-25 00:49:11,532 | INFO     | overall cleanup function is called
[2026-03-24 20:50:08] 2026-03-25 00:49:11,901 | WARNING  | process 801066 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 20:50:08] 2026-03-25 00:49:12,572 | INFO     | --- collectZombieJob: --- 10, [801066]
[2026-03-24 20:50:08] 2026-03-25 00:49:12,573 | INFO     | zombie collector waiting for pid 801066
[2026-03-24 20:50:08] 2026-03-25 00:49:12,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 20:50:08] 2026-03-25 00:49:12,573 | INFO     | collected zombie processes
[2026-03-24 20:50:08] 2026-03-25 00:49:12,573 | INFO     | will attempt to kill all subprocesses of pid=801066
[2026-03-24 20:50:08] 2026-03-25 00:49:14,934 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 20:50:08] 2026-03-25 00:49:14,952 | INFO     | PID=779092 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-24 20:50:08] 2026-03-25 00:49:14,952 | INFO     | .. there are 44 such processes running
[2026-03-24 20:50:08] 2026-03-25 00:49:15,171 | INFO     | process IDs to be killed: [801066] (in reverse order)
[2026-03-24 20:50:08] 2026-03-25 00:49:15,703 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 20:50:08] 2026-03-25 00:49:15,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 20:50:08] 2026-03-25 00:49:15,954 | INFO     | did not find any defunct processes belonging to 801066
[2026-03-24 20:50:08] 2026-03-25 00:49:16,046 | INFO     | did not find any defunct processes belonging to 801066
[2026-03-24 20:50:08] 2026-03-25 00:49:16,046 | INFO     | ready for new job
[2026-03-24 20:50:08] 2026-03-25 00:49:16,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 20:50:08] 2026-03-25 00:49:16,051 | INFO     | **************************************
[2026-03-24 20:50:08] 2026-03-25 00:49:16,051 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 20:50:08] 2026-03-25 00:49:16,051 | INFO     | **************************************
[2026-03-24 20:50:08] 2026-03-25 00:49:16,051 | INFO     | 
[2026-03-24 20:50:08] 2026-03-25 00:49:16,069 | INFO     | architecture information:
[2026-03-24 20:50:08] 2026-03-25 00:49:16,072 | INFO     | executing command: cat /etc/os-release
[2026-03-24 20:50:08] 2026-03-25 00:49:16,120 | INFO     | cat /etc/os-release:
[2026-03-24 20:50:08] NAME="CentOS Linux"
[2026-03-24 20:50:08] VERSION="7 (Core)"
[2026-03-24 20:50:08] ID="centos"
[2026-03-24 20:50:08] ID_LIKE="rhel fedora"
[2026-03-24 20:50:08] VERSION_ID="7"
[2026-03-24 20:50:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 20:50:08] ANSI_COLOR="0;31"
[2026-03-24 20:50:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 20:50:08] HOME_URL="https://www.centos.org/"
[2026-03-24 20:50:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 20:50:08] 
[2026-03-24 20:50:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 20:50:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 20:50:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 20:50:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 20:50:08] 
[2026-03-24 20:50:08] 2026-03-25 00:49:16,120 | INFO     | **************************************
[2026-03-24 20:50:08] 2026-03-25 00:49:16,504 | INFO     | number of running child processes to parent process 801066: 1
[2026-03-24 20:50:08] 2026-03-25 00:49:16,504 | INFO     | maximum number of monitored processes: 7
[2026-03-24 20:50:08] 2026-03-25 00:49:16,504 | INFO     | aborting job monitoring since job object (job id=7056945189) has expired
[2026-03-24 20:50:08] 2026-03-25 00:49:16,624 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-24 20:50:08] 2026-03-25 00:49:16,675 | INFO     | sufficient remaining disk space (169613459456 B)
[2026-03-24 20:50:08] 2026-03-25 00:49:16,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 20:50:08] 2026-03-25 00:49:16,675 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 20:50:08] 2026-03-25 00:49:16,675 | INFO     | update_server=False
[2026-03-24 20:50:08] 2026-03-25 00:49:16,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 20:50:08] 2026-03-25 00:49:16,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 20:50:08] 2026-03-25 00:49:16,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 20:50:08] 2026-03-25 00:49:16,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 20:50:08] 2026-03-25 00:49:16,676 | INFO     | will abort loop
[2026-03-24 20:50:08] 2026-03-25 00:49:16,741 | INFO     | all data control threads have been joined
[2026-03-24 20:50:08] 2026-03-25 00:49:16,946 | INFO     | all job control threads have been joined
[2026-03-24 20:50:08] 2026-03-25 00:49:16,947 | INFO     | all payload control threads have been joined
[2026-03-24 20:50:08] 2026-03-25 00:49:17,681 | INFO     | [job] queue monitor thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:17,681 | INFO     | [job] retrieve thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:17,684 | INFO     | [job] job monitor thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:17,687 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:17,747 | INFO     | [data] control thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:17,753 | INFO     | [job] validate thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:17,907 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:17,919 | INFO     | [data] copytool_in thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:17,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 20:50:08] 2026-03-25 00:49:17,967 | INFO     | [job] control thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:17,971 | INFO     | [payload] control thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:18,142 | INFO     | [payload] failed_post thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:18,199 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:18,415 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:19,090 | INFO     | [payload] validate_post thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:19,932 | INFO     | [data] copytool_out thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:20,709 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 20:50:08] 2026-03-25 00:49:49,404 | INFO     | PID=779092 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-24 20:50:08] 2026-03-25 00:49:49,404 | INFO     | .. there are 44 such processes running
[2026-03-24 20:50:08] 2026-03-25 00:49:49,404 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 20:50:08] 2026-03-25 00:49:49,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 20:50:08] 2026-03-25 00:49:49,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 20:50:08] 2026-03-25 00:49:52,338 | INFO     | [monitor] cgroup control has ended
[2026-03-24 20:50:08] 2026-03-25 00:49:53,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160602179392)>', '<ExcThread(monitor, started 140160075294464)>']
[2026-03-24 20:50:08] 2026-03-25 00:49:54,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 20:50:08] 2026-03-25 00:49:54,477 | INFO     | [monitor] control thread has ended
[2026-03-24 20:50:08] 2026-03-25 00:49:58,857 | INFO     | all workflow threads have been joined
[2026-03-24 20:50:08] 2026-03-25 00:49:58,858 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 20:50:08] 2026-03-25 00:49:58,858 | INFO     | traces error code: 0
[2026-03-24 20:50:08] 2026-03-25 00:49:58,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 20:50:08] 2026-03-25 00:50:05,965 [wrapper] ==== pilot stdout END ====
[2026-03-24 20:50:08] 2026-03-25 00:50:06,011 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 20:50:08] 2026-03-25 00:50:06,037 [wrapper] pilotpid: 779092
[2026-03-24 20:50:08] 2026-03-25 00:50:06,075 [wrapper] Pilot exit status: 0
[2026-03-24 20:50:08] 2026-03-25 00:50:06,173 [wrapper] pandaids: 7056945189
[2026-03-24 20:50:08] 2026-03-25 00:50:06,723 [wrapper] cleanup supervisor_pilot 3210133 779093
[2026-03-24 20:50:08] 2026-03-25 00:50:06,796 [wrapper] Test setup, not cleaning
[2026-03-24 20:50:08] 2026-03-25 00:50:06,906 [wrapper] apfmon messages muted
[2026-03-24 20:50:08] 2026-03-25 00:50:06,937 [wrapper] ==== wrapper stdout END ====
[2026-03-24 20:50:08] 2026-03-25 00:50:06,959 [wrapper] ==== wrapper stderr END ====
[2026-03-24 20:50:28]  *** Error codes and diagnostics ***
[2026-03-24 20:50:28]     "exeErrorCode": 0,
[2026-03-24 20:50:28]     "exeErrorDiag": "",
[2026-03-24 20:50:28]     "pilotErrorCode": 0,
[2026-03-24 20:50:28]     "pilotErrorDiag": "",
[2026-03-24 20:50:28]  *** Listing of results directory ***
[2026-03-24 20:50:28] total 476100
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 11:03 pilot3.tar.gz
[2026-03-24 20:50:28] -rwx------. 1 boincer umatlas     36322 Mar 16 11:04 runpilot2-wrapper.sh
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 11:05 queuedata.json
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas       100 Mar 24 15:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 20:50:28] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 24 15:39 run_atlas
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas       105 Mar 24 15:39 job.xml
[2026-03-24 20:50:28] -rw-r--r--. 2 boincer umatlas 236426096 Mar 24 15:39 EVNT.49130187._000005.pool.root.1
[2026-03-24 20:50:28] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 15:39 start_atlas.sh
[2026-03-24 20:50:28] drwxrwx--x. 2 boincer umatlas      4096 Mar 24 15:39 shared
[2026-03-24 20:50:28] -rw-r--r--. 2 boincer umatlas    597541 Mar 24 15:39 input.tar.gz
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas         0 Mar 24 15:39 boinc_lockfile
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas      2625 Mar 24 15:39 pandaJob.out
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas        57 Mar 24 15:39 setup.sh.local
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas   1010852 Mar 24 15:40 agis_schedconf.cvmfs.json
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas       429 Mar 24 15:41 workernode_map.json
[2026-03-24 20:50:28] drwx------. 5 boincer umatlas      4096 Mar 24 15:41 pilot3
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas 241554670 Mar 24 20:48 HITS.49178954._000112.pool.root.1
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas       530 Mar 24 20:48 boinc_task_state.xml
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas      7185 Mar 24 20:49 init_data.xml
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas      1038 Mar 24 20:49 memory_monitor_summary.json
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas   1511579 Mar 24 20:49 agis_ddmendpoints.agis.ALL.json
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas    504363 Mar 24 20:49 log.49178954._000112.job.log.tgz.1
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas      6331 Mar 24 20:49 heartbeat.json
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas        95 Mar 24 20:49 pilot_heartbeat.json
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas      5109 Mar 24 20:49 pilotlog.txt
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas   2296795 Mar 24 20:50 log.49178954._000112.job.log.1
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas       357 Mar 24 20:50 output.list
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas       620 Mar 24 20:50 runtime_log
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas   2816000 Mar 24 20:50 result.tar.gz
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas      9342 Mar 24 20:50 runtime_log.err
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas       656 Mar 24 20:50 QfuLDm5fOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsixLDmEQRVWn.diag
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas        28 Mar 24 20:50 wrapper_checkpoint.txt
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas      8192 Mar 24 20:50 boinc_mmap_file
[2026-03-24 20:50:28] -rw-r--r--. 1 boincer umatlas     21405 Mar 24 20:50 stderr.txt
[2026-03-24 20:50:28] HITS file was successfully produced:
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas 241554670 Mar 24 20:48 shared/HITS.pool.root.1
[2026-03-24 20:50:28]  *** Contents of shared directory: ***
[2026-03-24 20:50:28] total 470140
[2026-03-24 20:50:28] -rw-r--r--. 2 boincer umatlas 236426096 Mar 24 15:39 ATLAS.root_0
[2026-03-24 20:50:28] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 15:39 start_atlas.sh
[2026-03-24 20:50:28] -rw-r--r--. 2 boincer umatlas    597541 Mar 24 15:39 input.tar.gz
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas 241554670 Mar 24 20:48 HITS.pool.root.1
[2026-03-24 20:50:28] -rw-------. 1 boincer umatlas   2816000 Mar 24 20:50 result.tar.gz
20:50:29 (769795): run_atlas exited; CPU time 62070.192578
20:50:29 (769795): called boinc_finish(0)

</stderr_txt>
]]>

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