Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:43:11 (11529): wrapper (7.7.26015): starting
19:43:11 (11529): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 19:43:11] Arguments: --nthreads 8
[2026-03-24 19:43:11] Threads: 8
[2026-03-24 19:43:11] Checking for CVMFS
[2026-03-24 19:43:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 19:43:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 19:43:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 19:43:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 19:43:11] 2.11.0.0 4551 158968 73780 157653 0 55 3853326 4096001 43 130560 1 12641091 99.667 10001180 396 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 19:43:11] CVMFS is ok
[2026-03-24 19:43:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 19:43:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 19:43:11] Further information can be found at the LHC@home message board.
[2026-03-24 19:43:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 19:43:11] Checking for apptainer binary...
[2026-03-24 19:43:11] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 19:43:11] apptainer is not installed, using version from CVMFS
[2026-03-24 19:43:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 19:43:11] WARNING: Environment variable TMPDIR already has value [/tmp/job_11387513/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node398
[2026-03-24 19:43:11] apptainer works
[2026-03-24 19:43:11] Set ATHENA_PROC_NUMBER=8
[2026-03-24 19:43:11] Set ATHENA_CORE_NUMBER=8
[2026-03-24 19:43:11] Starting ATLAS job with PandaID=7056915826
[2026-03-24 19:43:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11387513/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 21:46:42]  *** The last 200 lines of the pilot log: ***
[2026-03-24 21:46:42] 2026-03-24 20:46:10,391 | INFO     | intersect: -26727260698.326744
[2026-03-24 21:46:42] 2026-03-24 20:46:10,391 | INFO     | chi2: 1.117850754077255
[2026-03-24 21:46:42] 2026-03-24 20:46:10,391 | INFO     | sum of square deviations: 483971865.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | sum of deviations: 7917058911.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | mean x: 1774381322.5
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | mean y: 2535008.9655172415
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | intersect: -29023700763.66682
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | chi2: 1.1194297221443172
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | current chi2=1.1194297221443172 (change=-0.1412503468198246 %)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | right removable region: 115
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | sum of square deviations: 483971865.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | sum of deviations: -4176450155.9999986
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | mean x: 1774381627.5
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | mean y: 2564119.2586206896
[2026-03-24 21:46:42] 2026-03-24 20:46:10,392 | INFO     | intersect: 15314645173.755264
[2026-03-24 21:46:42] 2026-03-24 20:46:10,393 | INFO     | chi2: 0.026019897799305594
[2026-03-24 21:46:42] 2026-03-24 20:46:10,393 | INFO     | current chi2=0.026019897799305594 (change=97.67232810780862 %)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,393 | INFO     | sum of square deviations: 424045160.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,393 | INFO     | sum of deviations: -1858126917.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,393 | INFO     | mean x: 1774381780.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,393 | INFO     | mean y: 2558239.108108108
[2026-03-24 21:46:42] 2026-03-24 20:46:10,393 | INFO     | intersect: 7777736115.097478
[2026-03-24 21:46:42] 2026-03-24 20:46:10,393 | INFO     | chi2: 0.016296244038043663
[2026-03-24 21:46:42] 2026-03-24 20:46:10,393 | INFO     | current chi2=0.016296244038043663 (change=37.370068999738464 %)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,393 | INFO     | sum of square deviations: 369281342.5
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | sum of deviations: -66975834.50000034
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | mean x: 1774381932.5
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | mean y: 2553246.537735849
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | intersect: 324369425.6232275
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | chi2: 0.008749545283964013
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | current chi2=0.008749545283964013 (change=46.309436312206934 %)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | sum of square deviations: 319447850.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | sum of deviations: 1458924678.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | mean x: 1774382085.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | mean y: 2548592.376237624
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | intersect: -8101089644.686849
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | chi2: 0.00040609097419203754
[2026-03-24 21:46:42] 2026-03-24 20:46:10,394 | INFO     | current chi2=0.00040609097419203754 (change=95.35871909896491 %)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | sum of square deviations: 274312120.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | sum of deviations: 1123590811.5
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | mean x: 1774382237.5
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | mean y: 2549721.3645833335
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | intersect: -7265374051.539841
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | chi2: 0.0003281556414655234
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | current chi2=0.0003281556414655234 (change=19.191594415900287 %)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | left removable region: 50
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | sum of square deviations: 85136480.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | sum of deviations: 306123193.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | mean x: 1774382817.0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | mean y: 2553272.5846153847
[2026-03-24 21:46:42] 2026-03-24 20:46:10,395 | INFO     | intersect: -6377552336.014362
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | chi2: 0.00026154847353061295
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | current memory leak: 3.60 B/s (using 65 data points, chi2=0.00)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | could have reported an average CPU frequency of 2489 MHz (8 samples)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | ..............................
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | . Timing measurements:
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | . get job = 0 s
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | . initial setup = 2 s
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | . payload setup = 3 s
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | . stage-in = 0 s
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | . payload execution = 7351 s
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | . stage-out = 0 s
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | . log creation = 0 s
[2026-03-24 21:46:42] 2026-03-24 20:46:10,396 | INFO     | ..............................
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | 
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | job summary report
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | --------------------------------------------------
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | PanDA job id: 7056915826
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | task id: 49177127
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | errors: (none)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | pilot state: finished 
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | transexitcode: 0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | exeerrorcode: 0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | exeerrordiag: 
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | exitcode: 0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | exitmsg: OK
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | cpuconsumptiontime: 53636 s
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | nevents: 400
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | neventsw: 0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | pid: 29347
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | pgrp: 29347
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | corecount: 8
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | event service: False
[2026-03-24 21:46:42] 2026-03-24 20:46:10,787 | INFO     | sizes: {0: 2280155, 1: 2280417, 11: 2280445, 7358: 2308016, 7359: 2317044, 7361: 2317422}
[2026-03-24 21:46:42] 2026-03-24 20:46:10,788 | INFO     | --------------------------------------------------
[2026-03-24 21:46:42] 2026-03-24 20:46:10,788 | INFO     | 
[2026-03-24 21:46:42] 2026-03-24 20:46:10,788 | INFO     | executing command: ls -lF /tmp/job_11387513/atlas/pilot/slots/0
[2026-03-24 21:46:42] 2026-03-24 20:46:10,797 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | job 7056915826 has completed (purged errors)
[2026-03-24 21:46:42] 2026-03-24 20:46:10,798 | INFO     | overall cleanup function is called
[2026-03-24 21:46:42] 2026-03-24 20:46:11,801 | INFO     | --- collectZombieJob: --- 10, [29347]
[2026-03-24 21:46:42] 2026-03-24 20:46:11,801 | INFO     | zombie collector waiting for pid 29347
[2026-03-24 21:46:42] 2026-03-24 20:46:11,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 21:46:42] 2026-03-24 20:46:11,801 | INFO     | collected zombie processes
[2026-03-24 21:46:42] 2026-03-24 20:46:11,801 | INFO     | will attempt to kill all subprocesses of pid=29347
[2026-03-24 21:46:42] 2026-03-24 20:46:11,909 | INFO     | process IDs to be killed: [29347] (in reverse order)
[2026-03-24 21:46:42] 2026-03-24 20:46:11,946 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 21:46:42] 2026-03-24 20:46:11,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 21:46:42] 2026-03-24 20:46:11,950 | INFO     | did not find any defunct processes belonging to 29347
[2026-03-24 21:46:42] 2026-03-24 20:46:11,953 | INFO     | did not find any defunct processes belonging to 29347
[2026-03-24 21:46:42] 2026-03-24 20:46:11,953 | INFO     | ready for new job
[2026-03-24 21:46:42] 2026-03-24 20:46:11,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 21:46:42] 2026-03-24 20:46:11,954 | INFO     | **************************************
[2026-03-24 21:46:42] 2026-03-24 20:46:11,954 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 21:46:42] 2026-03-24 20:46:11,954 | INFO     | **************************************
[2026-03-24 21:46:42] 2026-03-24 20:46:11,954 | INFO     | 
[2026-03-24 21:46:42] 2026-03-24 20:46:11,967 | INFO     | architecture information:
[2026-03-24 21:46:42] 2026-03-24 20:46:11,967 | INFO     | executing command: cat /etc/os-release
[2026-03-24 21:46:42] 2026-03-24 20:46:11,974 | INFO     | cat /etc/os-release:
[2026-03-24 21:46:42] NAME="CentOS Linux"
[2026-03-24 21:46:42] VERSION="7 (Core)"
[2026-03-24 21:46:42] ID="centos"
[2026-03-24 21:46:42] ID_LIKE="rhel fedora"
[2026-03-24 21:46:42] VERSION_ID="7"
[2026-03-24 21:46:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 21:46:42] ANSI_COLOR="0;31"
[2026-03-24 21:46:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 21:46:42] HOME_URL="https://www.centos.org/"
[2026-03-24 21:46:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 21:46:42] 
[2026-03-24 21:46:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 21:46:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 21:46:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 21:46:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 21:46:42] 
[2026-03-24 21:46:42] 2026-03-24 20:46:11,974 | INFO     | **************************************
[2026-03-24 21:46:42] 2026-03-24 20:46:12,476 | INFO     | executing command: df -mP /tmp/job_11387513/atlas/pilot/slots/0
[2026-03-24 21:46:42] 2026-03-24 20:46:12,482 | INFO     | sufficient remaining disk space (224049233920 B)
[2026-03-24 21:46:42] 2026-03-24 20:46:12,482 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 21:46:42] 2026-03-24 20:46:12,482 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 21:46:42] 2026-03-24 20:46:12,482 | INFO     | update_server=False
[2026-03-24 21:46:42] 2026-03-24 20:46:12,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 21:46:42] 2026-03-24 20:46:12,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 21:46:42] 2026-03-24 20:46:13,023 | INFO     | all data control threads have been joined
[2026-03-24 21:46:42] 2026-03-24 20:46:13,081 | INFO     | all payload control threads have been joined
[2026-03-24 21:46:42] 2026-03-24 20:46:13,183 | INFO     | all job control threads have been joined
[2026-03-24 21:46:42] 2026-03-24 20:46:13,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 21:46:42] 2026-03-24 20:46:13,288 | INFO     | aborting loop
[2026-03-24 21:46:42] 2026-03-24 20:46:13,487 | INFO     | [job] retrieve thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:13,681 | INFO     | [payload] validate_post thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:13,743 | INFO     | [data] copytool_in thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:13,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 21:46:42] 2026-03-24 20:46:14,013 | INFO     | [payload] failed_post thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:14,028 | INFO     | [data] control thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:14,086 | INFO     | [payload] control thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:14,188 | INFO     | [job] control thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:14,293 | INFO     | [job] job monitor thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:14,663 | INFO     | [job] validate thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:14,837 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:14,850 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:14,880 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:15,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 21:46:42] 2026-03-24 20:46:15,845 | INFO     | [data] copytool_out thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:16,459 | INFO     | [job] queue monitor thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:16,488 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:23,209 | INFO     | job.realtimelogging is not enabled
[2026-03-24 21:46:42] 2026-03-24 20:46:24,214 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 21:46:42] 2026-03-24 20:46:29,992 | INFO     | [monitor] cgroup control has ended
[2026-03-24 21:46:42] 2026-03-24 20:46:30,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456056887040)>']
[2026-03-24 21:46:42] 2026-03-24 20:46:35,293 | INFO     | all workflow threads have been joined
[2026-03-24 21:46:42] 2026-03-24 20:46:35,293 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 21:46:42] 2026-03-24 20:46:35,293 | INFO     | traces error code: 0
[2026-03-24 21:46:42] 2026-03-24 20:46:35,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 21:46:42] 2026-03-24 20:46:42,570 | INFO     | PID=18633 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-24 21:46:42] 2026-03-24 20:46:42,570 | INFO     | .. there are 5 such processes running
[2026-03-24 21:46:42] 2026-03-24 20:46:42,570 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 21:46:42] 2026-03-24 20:46:42,570 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 21:46:42] 2026-03-24 20:46:42,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 21:46:42] 2026-03-24 20:46:42,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 21:46:42] 2026-03-24 20:46:42,570 | INFO     | [monitor] control thread has ended
[2026-03-24 21:46:42] 2026-03-24 20:46:42,625 [wrapper] ==== pilot stdout END ====
[2026-03-24 21:46:42] 2026-03-24 20:46:42,626 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 21:46:42] 2026-03-24 20:46:42,627 [wrapper] pilotpid: 18633
[2026-03-24 21:46:42] 2026-03-24 20:46:42,628 [wrapper] Pilot exit status: 0
[2026-03-24 21:46:42] 2026-03-24 20:46:42,633 [wrapper] pandaids: 7056915826
[2026-03-24 21:46:42] 2026-03-24 20:46:42,655 [wrapper] cleanup supervisor_pilot 26431 18634
[2026-03-24 21:46:42] 2026-03-24 20:46:42,656 [wrapper] Test setup, not cleaning
[2026-03-24 21:46:42] 2026-03-24 20:46:42,657 [wrapper] apfmon messages muted
[2026-03-24 21:46:42] 2026-03-24 20:46:42,658 [wrapper] ==== wrapper stdout END ====
[2026-03-24 21:46:42] 2026-03-24 20:46:42,659 [wrapper] ==== wrapper stderr END ====
[2026-03-24 21:46:42]  *** Error codes and diagnostics ***
[2026-03-24 21:46:42]     "exeErrorCode": 0,
[2026-03-24 21:46:42]     "exeErrorDiag": "",
[2026-03-24 21:46:42]     "pilotErrorCode": 0,
[2026-03-24 21:46:42]     "pilotErrorDiag": "",
[2026-03-24 21:46:42]  *** Listing of results directory ***
[2026-03-24 21:46:42] total 486888
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-24 21:46:42] -rwx------ 1 mf493845 unix-user     36322 Mar 16 14:32 runpilot2-wrapper.sh
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user       100 Mar 24 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 21:46:42] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 18:41 run_atlas
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user       105 Mar 24 18:41 job.xml
[2026-03-24 21:46:42] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 19:43 start_atlas.sh
[2026-03-24 21:46:42] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 19:43 shared
[2026-03-24 21:46:42] -rw-r--r-- 2 mf493845 unix-user    596138 Mar 24 19:43 input.tar.gz
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user      6391 Mar 24 19:43 init_data.xml
[2026-03-24 21:46:42] -rw-r--r-- 2 mf493845 unix-user 242287962 Mar 24 19:43 EVNT.49136573._000030.pool.root.1
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user         0 Mar 24 19:43 boinc_setup_complete
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user      8192 Mar 24 19:43 boinc_mmap_file
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user         0 Mar 24 19:43 boinc_lockfile
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user      2605 Mar 24 19:43 pandaJob.out
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user      5111 Mar 24 19:43 queuedata.json
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user   1010852 Mar 24 19:43 agis_schedconf.cvmfs.json
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user   1511579 Mar 24 19:43 agis_ddmendpoints.agis.ALL.json
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user       420 Mar 24 19:43 workernode_map.json
[2026-03-24 21:46:42] drwx------ 5 mf493845 unix-user       440 Mar 24 19:43 pilot3
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user 249462674 Mar 24 21:45 HITS.49177127._000741.pool.root.1
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user        95 Mar 24 21:46 pilot_heartbeat.json
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user      1023 Mar 24 21:46 memory_monitor_summary.json
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user    370437 Mar 24 21:46 log.49177127._000741.job.log.tgz.1
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user      6312 Mar 24 21:46 heartbeat.json
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user       820 Mar 24 21:46 pilotlog.txt
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user   1086183 Mar 24 21:46 log.49177127._000741.job.log.1
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user       357 Mar 24 21:46 output.list
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user       620 Mar 24 21:46 runtime_log
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user   1474560 Mar 24 21:46 result.tar.gz
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user      9219 Mar 24 21:46 runtime_log.err
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user       646 Mar 24 21:46 9ZTNDmmENM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhDxLDmcqMcWo.diag
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user     21329 Mar 24 21:46 stderr.txt
[2026-03-24 21:46:42] HITS file was successfully produced:
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user 249462674 Mar 24 21:45 shared/HITS.pool.root.1
[2026-03-24 21:46:42]  *** Contents of shared directory: ***
[2026-03-24 21:46:42] total 482268
[2026-03-24 21:46:42] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 19:43 start_atlas.sh
[2026-03-24 21:46:42] -rw-r--r-- 2 mf493845 unix-user    596138 Mar 24 19:43 input.tar.gz
[2026-03-24 21:46:42] -rw-r--r-- 2 mf493845 unix-user 242287962 Mar 24 19:43 ATLAS.root_0
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user 249462674 Mar 24 21:45 HITS.pool.root.1
[2026-03-24 21:46:42] -rw------- 1 mf493845 unix-user   1474560 Mar 24 21:46 result.tar.gz
21:46:44 (11529): run_atlas exited; CPU time 53740.480267
21:46:44 (11529): called boinc_finish(0)

</stderr_txt>
]]>

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