Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:38:10 (3133309): wrapper (7.7.26015): starting
10:38:10 (3133309): wrapper: running run_atlas (--nthreads 12)
[2026-03-25 10:38:10] Arguments: --nthreads 12
[2026-03-25 10:38:10] Threads: 12
[2026-03-25 10:38:10] Checking for CVMFS
[2026-03-25 10:38:10] No cvmfs_config command found, will try listing directly
[2026-03-25 10:38:10] CVMFS is ok
[2026-03-25 10:38:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 10:38:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 10:38:10] Further information can be found at the LHC@home message board.
[2026-03-25 10:38:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 10:38:10] Checking for apptainer binary...
[2026-03-25 10:38:10] which: no apptainer in ((null))
[2026-03-25 10:38:10] apptainer is not installed, using version from CVMFS
[2026-03-25 10:38:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 10:38:11] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot168/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-25 10:38:11] apptainer works
[2026-03-25 10:38:11] Set ATHENA_PROC_NUMBER=12
[2026-03-25 10:38:11] Set ATHENA_CORE_NUMBER=12
[2026-03-25 10:38:11] Starting ATLAS job with PandaID=7060578561
[2026-03-25 10:38:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot168/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 11:37:33]  *** The last 200 lines of the pilot log: ***
[2026-03-25 11:37:33]  guid=dd837d9d-31af-4508-b3ee-bb1e07aef25e
[2026-03-25 11:37:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-25 11:37:33]  is_altstaged=None
[2026-03-25 11:37:33]  is_tar=False
[2026-03-25 11:37:33]  lfn=log.49267739._000029.job.log.tgz.1
[2026-03-25 11:37:33]  mtime=0
[2026-03-25 11:37:33]  protocol_id=None
[2026-03-25 11:37:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-25 11:37:33]  replicas=None
[2026-03-25 11:37:33]  scope=mc23_13p6TeV
[2026-03-25 11:37:33]  status=None
[2026-03-25 11:37:33]  status_code=0
[2026-03-25 11:37:33]  storage_token=
[2026-03-25 11:37:33]  surl=/var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7060578561/log.49267739._000029.job.log.tgz.1
[2026-03-25 11:37:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/32/log.49267739._000029.job.log.tgz.1
[2026-03-25 11:37:33]  workdir=None
[2026-03-25 11:37:33] ]
[2026-03-25 11:37:33] 2026-03-25 10:36:54,491 | INFO     | transferring file log.49267739._000029.job.log.tgz.1 from /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7060578561/log.49267739._000029.job.log.tgz.1 to /var/lib/
[2026-03-25 11:37:33] 2026-03-25 10:36:54,491 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7060578561/log.49267739._000029.job.log.tgz.1 /var/lib/boinc/var/slot168/slots/1/
[2026-03-25 11:37:33] 2026-03-25 10:36:54,504 | INFO     | adding to output.list: log.49267739._000029.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/32/log.49267739._000029.job.log.tg
[2026-03-25 11:37:33] 2026-03-25 10:36:54,505 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-25 11:37:33] 2026-03-25 10:36:54,505 | INFO     | summary of transferred files:
[2026-03-25 11:37:33] 2026-03-25 10:36:54,505 | INFO     |  -- lfn=log.49267739._000029.job.log.tgz.1, status_code=0, status=transferred
[2026-03-25 11:37:33] 2026-03-25 10:36:54,505 | INFO     | stage-out finished correctly
[2026-03-25 11:37:33] 2026-03-25 10:36:54,553 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-25 11:37:33] 2026-03-25 10:36:55,094 | INFO     | job 7060578561 has state=finished
[2026-03-25 11:37:33] 2026-03-25 10:36:55,095 | INFO     | preparing for final server update for job 7060578561 in state='finished'
[2026-03-25 11:37:33] 2026-03-25 10:36:55,095 | INFO     | reading metadata from: /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7060578561/jobReport.json
[2026-03-25 11:37:33] 2026-03-25 10:36:55,096 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot168/slots/1/workernode_map.json
[2026-03-25 11:37:33] 2026-03-25 10:36:55,096 | INFO     | this job has now completed (state=finished)
[2026-03-25 11:37:33] 2026-03-25 10:36:55,097 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 11:37:33] 2026-03-25 10:36:55,097 | INFO     | log transfer has been attempted: DONE
[2026-03-25 11:37:33] 2026-03-25 10:36:55,097 | INFO     | job 7060578561 has finished - writing final server update
[2026-03-25 11:37:33] 2026-03-25 10:36:55,097 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2330727/.job.ad'
[2026-03-25 11:37:33] 2026-03-25 10:36:55,097 | INFO     | total number of processed events: 400 (read)
[2026-03-25 11:37:33] 2026-03-25 10:36:55,102 | INFO     | monitor loop #260: job 0:7060578561 is in state 'finished'
[2026-03-25 11:37:33] 2026-03-25 10:36:55,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-25 11:37:33] 2026-03-25 10:36:55,114 | INFO     | using path: /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7060578561/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 11:37:33] 2026-03-25 10:36:55,115 | INFO     | extracted standard info from prmon json
[2026-03-25 11:37:33] 2026-03-25 10:36:55,115 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 11:37:33] 2026-03-25 10:36:55,115 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 11:37:33] 2026-03-25 10:36:55,115 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 11:37:33] 2026-03-25 10:36:55,115 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 11:37:33] 2026-03-25 10:36:55,116 | INFO     | fitting pss+swap vs Time
[2026-03-25 11:37:33] 2026-03-25 10:36:55,116 | INFO     | sum of square deviations: 41117050.0
[2026-03-25 11:37:33] 2026-03-25 10:36:55,116 | INFO     | sum of deviations: -350129142.00000006
[2026-03-25 11:37:33] 2026-03-25 10:36:55,116 | INFO     | mean x: 1774433354.0
[2026-03-25 11:37:33] 2026-03-25 10:36:55,116 | INFO     | mean y: 2748626.0392156863
[2026-03-25 11:37:33] 2026-03-25 10:36:55,116 | INFO     | intersect: 15112802187.085115
[2026-03-25 11:37:33] 2026-03-25 10:36:55,116 | INFO     | chi2: 0.0026518798635717274
[2026-03-25 11:37:33] 2026-03-25 10:36:55,116 | INFO     | current memory leak: -8.52 B/s (using 51 data points, chi2=0.00)
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | could have reported an average CPU frequency of 3590 MHz (5 samples)
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | ..............................
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | . Timing measurements:
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | . get job = 0 s
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | . initial setup = 4 s
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | . payload setup = 6 s
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | . stage-in = 0 s
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | . payload execution = 3489 s
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | . stage-out = 0 s
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | . log creation = 0 s
[2026-03-25 11:37:33] 2026-03-25 10:36:55,117 | INFO     | ..............................
[2026-03-25 11:37:33] 2026-03-25 10:36:55,163 | INFO     | 
[2026-03-25 11:37:33] 2026-03-25 10:36:55,163 | INFO     | job summary report
[2026-03-25 11:37:33] 2026-03-25 10:36:55,163 | INFO     | --------------------------------------------------
[2026-03-25 11:37:33] 2026-03-25 10:36:55,163 | INFO     | PanDA job id: 7060578561
[2026-03-25 11:37:33] 2026-03-25 10:36:55,163 | INFO     | task id: 49267739
[2026-03-25 11:37:33] 2026-03-25 10:36:55,163 | INFO     | errors: (none)
[2026-03-25 11:37:33] 2026-03-25 10:36:55,163 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 11:37:33] 2026-03-25 10:36:55,163 | INFO     | pilot state: finished 
[2026-03-25 11:37:33] 2026-03-25 10:36:55,163 | INFO     | transexitcode: 0
[2026-03-25 11:37:33] 2026-03-25 10:36:55,163 | INFO     | exeerrorcode: 0
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | exeerrordiag: 
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | exitcode: 0
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | exitmsg: OK
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | cpuconsumptiontime: 38381 s
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | nevents: 400
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | neventsw: 0
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | pid: 3143564
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | pgrp: 3143564
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | corecount: 12
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | event service: False
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | sizes: {0: 2280238, 11: 2280238, 3499: 2305935, 3501: 2315013, 3502: 2315183}
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | --------------------------------------------------
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | 
[2026-03-25 11:37:33] 2026-03-25 10:36:55,164 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot168/slots/1
[2026-03-25 11:37:33] 2026-03-25 10:36:55,187 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | job 7060578561 has completed (purged errors)
[2026-03-25 11:37:33] 2026-03-25 10:36:55,188 | INFO     | overall cleanup function is called
[2026-03-25 11:37:33] 2026-03-25 10:36:56,196 | INFO     | --- collectZombieJob: --- 10, [3143564]
[2026-03-25 11:37:33] 2026-03-25 10:36:56,196 | INFO     | zombie collector waiting for pid 3143564
[2026-03-25 11:37:33] 2026-03-25 10:36:56,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 11:37:33] 2026-03-25 10:36:56,196 | INFO     | collected zombie processes
[2026-03-25 11:37:33] 2026-03-25 10:36:56,196 | INFO     | will attempt to kill all subprocesses of pid=3143564
[2026-03-25 11:37:33] 2026-03-25 10:36:56,554 | INFO     | process IDs to be killed: [3143564] (in reverse order)
[2026-03-25 11:37:33] 2026-03-25 10:36:56,706 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 11:37:33] 2026-03-25 10:36:56,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 11:37:33] 2026-03-25 10:36:56,732 | INFO     | did not find any defunct processes belonging to 3143564
[2026-03-25 11:37:33] 2026-03-25 10:36:56,755 | INFO     | did not find any defunct processes belonging to 3143564
[2026-03-25 11:37:33] 2026-03-25 10:36:56,756 | INFO     | ready for new job
[2026-03-25 11:37:33] 2026-03-25 10:36:56,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 11:37:33] 2026-03-25 10:36:56,757 | INFO     | **************************************
[2026-03-25 11:37:33] 2026-03-25 10:36:56,757 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 11:37:33] 2026-03-25 10:36:56,757 | INFO     | **************************************
[2026-03-25 11:37:33] 2026-03-25 10:36:56,757 | INFO     | 
[2026-03-25 11:37:33] 2026-03-25 10:36:56,763 | INFO     | architecture information:
[2026-03-25 11:37:33] 2026-03-25 10:36:56,763 | INFO     | executing command: cat /etc/os-release
[2026-03-25 11:37:33] 2026-03-25 10:36:56,777 | INFO     | cat /etc/os-release:
[2026-03-25 11:37:33] NAME="CentOS Linux"
[2026-03-25 11:37:33] VERSION="7 (Core)"
[2026-03-25 11:37:33] ID="centos"
[2026-03-25 11:37:33] ID_LIKE="rhel fedora"
[2026-03-25 11:37:33] VERSION_ID="7"
[2026-03-25 11:37:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 11:37:33] ANSI_COLOR="0;31"
[2026-03-25 11:37:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 11:37:33] HOME_URL="https://www.centos.org/"
[2026-03-25 11:37:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 11:37:33] 
[2026-03-25 11:37:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 11:37:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 11:37:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 11:37:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 11:37:33] 
[2026-03-25 11:37:33] 2026-03-25 10:36:56,777 | INFO     | **************************************
[2026-03-25 11:37:33] 2026-03-25 10:36:57,277 | INFO     | executing command: df -mP /var/lib/boinc/var/slot168/slots/1
[2026-03-25 11:37:33] 2026-03-25 10:36:57,292 | INFO     | sufficient remaining disk space (19620954112 B)
[2026-03-25 11:37:33] 2026-03-25 10:36:57,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 11:37:33] 2026-03-25 10:36:57,292 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 11:37:33] 2026-03-25 10:36:57,292 | INFO     | update_server=False
[2026-03-25 11:37:33] 2026-03-25 10:36:57,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 11:37:33] 2026-03-25 10:36:57,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 11:37:33] 2026-03-25 10:36:57,605 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 11:37:33] 2026-03-25 10:36:57,605 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 11:37:33] 2026-03-25 10:36:57,605 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:37:33] 2026-03-25 10:36:57,605 | INFO     | will abort loop
[2026-03-25 11:37:33] 2026-03-25 10:36:57,877 | INFO     | all job control threads have been joined
[2026-03-25 11:37:33] 2026-03-25 10:36:58,097 | INFO     | all data control threads have been joined
[2026-03-25 11:37:33] 2026-03-25 10:36:58,205 | INFO     | all payload control threads have been joined
[2026-03-25 11:37:33] 2026-03-25 10:36:58,298 | INFO     | [job] retrieve thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:58,306 | INFO     | [job] validate thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:58,447 | INFO     | [payload] validate_post thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:58,596 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:58,610 | INFO     | [job] job monitor thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:58,681 | INFO     | [data] copytool_in thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:58,878 | INFO     | [job] control thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:58,990 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:59,097 | INFO     | [data] control thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:59,210 | INFO     | [payload] control thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:59,271 | INFO     | [payload] failed_post thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:59,563 | INFO     | [data] copytool_out thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:36:59,762 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:37:00,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:37:33] 2026-03-25 10:37:00,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 11:37:33] 2026-03-25 10:37:01,178 | INFO     | [job] queue monitor thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:37:04,605 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:37:08,202 | INFO     | job.realtimelogging is not enabled
[2026-03-25 11:37:33] 2026-03-25 10:37:09,207 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 11:37:33] 2026-03-25 10:37:27,300 | INFO     | PID=3137829 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 11:37:33] 2026-03-25 10:37:27,300 | INFO     | .. there are 15 such processes running
[2026-03-25 11:37:33] 2026-03-25 10:37:27,301 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 11:37:33] 2026-03-25 10:37:27,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 11:37:33] 2026-03-25 10:37:27,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 11:37:33] 2026-03-25 10:37:27,530 | INFO     | [monitor] cgroup control has ended
[2026-03-25 11:37:33] 2026-03-25 10:37:28,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22620461823808)>', '<ExcThread(monitor, started 22620218328832)>']
[2026-03-25 11:37:33] 2026-03-25 10:37:29,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 11:37:33] 2026-03-25 10:37:29,311 | INFO     | [monitor] control thread has ended
[2026-03-25 11:37:33] 2026-03-25 10:37:33,549 | INFO     | all workflow threads have been joined
[2026-03-25 11:37:33] 2026-03-25 10:37:33,549 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 11:37:33] 2026-03-25 10:37:33,549 | INFO     | traces error code: 0
[2026-03-25 11:37:33] 2026-03-25 10:37:33,549 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 11:37:33] 2026-03-25 10:37:33,666 [wrapper] ==== pilot stdout END ====
[2026-03-25 11:37:33] 2026-03-25 10:37:33,668 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 11:37:33] 2026-03-25 10:37:33,670 [wrapper] pilotpid: 3137829
[2026-03-25 11:37:33] 2026-03-25 10:37:33,672 [wrapper] Pilot exit status: 0
[2026-03-25 11:37:33] 2026-03-25 10:37:33,683 [wrapper] pandaids: 7060578561
[2026-03-25 11:37:33] 2026-03-25 10:37:33,794 [wrapper] cleanup supervisor_pilot 3352743 3137830
[2026-03-25 11:37:33] 2026-03-25 10:37:33,797 [wrapper] Test setup, not cleaning
[2026-03-25 11:37:33] 2026-03-25 10:37:33,799 [wrapper] apfmon messages muted
[2026-03-25 11:37:33] 2026-03-25 10:37:33,801 [wrapper] ==== wrapper stdout END ====
[2026-03-25 11:37:33] 2026-03-25 10:37:33,803 [wrapper] ==== wrapper stderr END ====
[2026-03-25 11:37:33]  *** Error codes and diagnostics ***
[2026-03-25 11:37:33]     "exeErrorCode": 0,
[2026-03-25 11:37:33]     "exeErrorDiag": "",
[2026-03-25 11:37:33]     "pilotErrorCode": 0,
[2026-03-25 11:37:33]     "pilotErrorDiag": "",
[2026-03-25 11:37:33]  *** Listing of results directory ***
[2026-03-25 11:37:33] total 474032
[2026-03-25 11:37:33] -rwx------. 1 boinc boinc     36322 Mar 22 05:32 runpilot2-wrapper.sh
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc      5111 Mar 23 22:56 queuedata.json
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc    585013 Mar 23 22:57 pilot3.tar.gz
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc       100 Mar 25 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 11:37:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar 25 10:38 run_atlas
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc       105 Mar 25 10:38 job.xml
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc      6711 Mar 25 10:38 init_data.xml
[2026-03-25 11:37:33] -rw-r--r--. 2 boinc boinc 253467154 Mar 25 10:38 EVNT.49122030._000001.pool.root.1
[2026-03-25 11:37:33] -rw-r--r--. 2 boinc boinc     15845 Mar 25 10:38 start_atlas.sh
[2026-03-25 11:37:33] drwxrwx--x. 2 boinc boinc      4096 Mar 25 10:38 shared
[2026-03-25 11:37:33] -rw-r--r--. 2 boinc boinc    597552 Mar 25 10:38 input.tar.gz
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc         0 Mar 25 10:38 boinc_lockfile
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc      2602 Mar 25 10:38 pandaJob.out
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc   1010788 Mar 25 10:38 agis_schedconf.cvmfs.json
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc   1511579 Mar 25 10:38 agis_ddmendpoints.agis.ALL.json
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc       445 Mar 25 10:38 workernode_map.json
[2026-03-25 11:37:33] drwx------. 5 boinc boinc      4096 Mar 25 10:38 pilot3
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc 226212323 Mar 25 11:36 HITS.49267739._000029.pool.root.1
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc       529 Mar 25 11:36 boinc_task_state.xml
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc        95 Mar 25 11:36 pilot_heartbeat.json
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc      1029 Mar 25 11:36 memory_monitor_summary.json
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc    358721 Mar 25 11:36 log.49267739._000029.job.log.tgz.1
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc      6340 Mar 25 11:36 heartbeat.json
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc      8192 Mar 25 11:37 boinc_mmap_file
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc        27 Mar 25 11:37 wrapper_checkpoint.txt
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc      5088 Mar 25 11:37 pilotlog.txt
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc    533627 Mar 25 11:37 log.49267739._000029.job.log.1
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc       357 Mar 25 11:37 output.list
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc       620 Mar 25 11:37 runtime_log
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc    911360 Mar 25 11:37 result.tar.gz
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc      9223 Mar 25 11:37 runtime_log.err
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc       663 Mar 25 11:37 RYVNDmrfPO9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGS1LDmcGPpXn.diag
[2026-03-25 11:37:33] -rw-r--r--. 1 boinc boinc     21222 Mar 25 11:37 stderr.txt
[2026-03-25 11:37:33] HITS file was successfully produced:
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc 226212323 Mar 25 11:36 shared/HITS.pool.root.1
[2026-03-25 11:37:33]  *** Contents of shared directory: ***
[2026-03-25 11:37:33] total 469940
[2026-03-25 11:37:33] -rw-r--r--. 2 boinc boinc 253467154 Mar 25 10:38 ATLAS.root_0
[2026-03-25 11:37:33] -rw-r--r--. 2 boinc boinc     15845 Mar 25 10:38 start_atlas.sh
[2026-03-25 11:37:33] -rw-r--r--. 2 boinc boinc    597552 Mar 25 10:38 input.tar.gz
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc 226212323 Mar 25 11:36 HITS.pool.root.1
[2026-03-25 11:37:33] -rw-------. 1 boinc boinc    911360 Mar 25 11:37 result.tar.gz
11:37:35 (3133309): run_atlas exited; CPU time 38508.541147
11:37:35 (3133309): called boinc_finish(0)

</stderr_txt>
]]>

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