Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:49:11 (4155159): wrapper (7.7.26015): starting
13:49:11 (4155159): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 13:49:11] Arguments: --nthreads 8
[2026-03-24 13:49:11] Threads: 8
[2026-03-24 13:49:11] Checking for CVMFS
[2026-03-24 13:49:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 13:49:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 13:49:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 13:49:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 13:49:13] 2.13.3.0 11959 200292 698440 157652 3 374 19455530 32935936 28486 16776704 0 800789737 99.558 1043579592 32484 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-24 13:49:13] CVMFS is ok
[2026-03-24 13:49:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 13:49:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 13:49:13] Further information can be found at the LHC@home message board.
[2026-03-24 13:49:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 13:49:13] Checking for apptainer binary...
[2026-03-24 13:49:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 13:49:13] Running /usr/bin/apptainer --version
[2026-03-24 13:49:13] apptainer version 1.4.5-2.el9
[2026-03-24 13:49:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 13:49:14] c6-8-25-4.aglt2.org
[2026-03-24 13:49:14] apptainer works
[2026-03-24 13:49:14] Set ATHENA_PROC_NUMBER=8
[2026-03-24 13:49:14] Set ATHENA_CORE_NUMBER=8
[2026-03-24 13:49:14] Starting ATLAS job with PandaID=7056915819
[2026-03-24 13:49:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:00:08 (4155159): BOINC client no longer exists - exiting
21:00:08 (4155159): timer handler: client dead, exiting
21:11:00 (1478232): wrapper (7.7.26015): starting
21:11:00 (1478232): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 21:11:00] Arguments: --nthreads 8
[2026-03-24 21:11:00] Threads: 8
[2026-03-24 21:11:00] This job has been restarted, cleaning up previous attempt
[2026-03-24 21:11:01] Checking for CVMFS
[2026-03-24 21:11:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 21:11:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 21:11:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 21:11:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 21:11:01] 2.13.3.0 11959 200734 700596 157664 2 318 26810782 32935936 24356 16776704 0 802003939 99.558 1044820370 32482 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-24 21:11:01] CVMFS is ok
[2026-03-24 21:11:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 21:11:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 21:11:01] Further information can be found at the LHC@home message board.
[2026-03-24 21:11:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 21:11:01] Checking for apptainer binary...
[2026-03-24 21:11:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 21:11:01] Running /usr/bin/apptainer --version
[2026-03-24 21:11:01] apptainer version 1.4.5-2.el9
[2026-03-24 21:11:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 21:11:02] c6-8-25-4.aglt2.org
[2026-03-24 21:11:02] apptainer works
[2026-03-24 21:11:02] Set ATHENA_PROC_NUMBER=8
[2026-03-24 21:11:02] Set ATHENA_CORE_NUMBER=8
[2026-03-24 21:11:02] Starting ATLAS job with PandaID=7056915819
[2026-03-24 21:11:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 23:58:51]  *** The last 200 lines of the pilot log: ***
[2026-03-25 23:58:51] 2026-03-26 03:58:14,559 | INFO     | log transfer has been attempted: DONE
[2026-03-25 23:58:51] 2026-03-26 03:58:14,559 | INFO     | job 7056915819 has finished - writing final server update
[2026-03-25 23:58:51] 2026-03-26 03:58:14,560 | INFO     | total number of processed events: 400 (read)
[2026-03-25 23:58:51] 2026-03-26 03:58:14,598 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7056915819/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 23:58:51] 2026-03-26 03:58:14,599 | INFO     | extracted standard info from prmon json
[2026-03-25 23:58:51] 2026-03-26 03:58:14,599 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 23:58:51] 2026-03-26 03:58:14,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 23:58:51] 2026-03-26 03:58:14,600 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 23:58:51] 2026-03-26 03:58:14,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 23:58:51] 2026-03-26 03:58:14,664 | INFO     | fitting pss+swap vs Time
[2026-03-25 23:58:51] 2026-03-26 03:58:14,670 | INFO     | sum of square deviations: 1223058234445.342
[2026-03-25 23:58:51] 2026-03-26 03:58:14,724 | INFO     | sum of deviations: 686527153157.3925
[2026-03-25 23:58:51] 2026-03-26 03:58:14,724 | INFO     | mean x: 1774449278.5696204
[2026-03-25 23:58:51] 2026-03-26 03:58:14,724 | INFO     | mean y: 2528741.7373417723
[2026-03-25 23:58:51] 2026-03-26 03:58:14,724 | INFO     | intersect: -993505279.6443536
[2026-03-25 23:58:51] 2026-03-26 03:58:14,726 | INFO     | chi2: 2.4612260234306387
[2026-03-25 23:58:51] 2026-03-26 03:58:14,728 | INFO     | sum of square deviations: 1211483595160.3167
[2026-03-25 23:58:51] 2026-03-26 03:58:14,791 | INFO     | sum of deviations: 780354447939.3359
[2026-03-25 23:58:51] 2026-03-26 03:58:14,791 | INFO     | mean x: 1774449126.0698414
[2026-03-25 23:58:51] 2026-03-26 03:58:14,792 | INFO     | mean y: 2529974.506031746
[2026-03-25 23:58:51] 2026-03-26 03:58:14,792 | INFO     | intersect: -1140448167.0902066
[2026-03-25 23:58:51] 2026-03-26 03:58:14,793 | INFO     | chi2: 1.7695784863340054
[2026-03-25 23:58:51] 2026-03-26 03:58:14,794 | INFO     | current chi2=1.7695784863340054 (change=28.101748092707226 %)
[2026-03-25 23:58:51] 2026-03-26 03:58:14,795 | INFO     | sum of square deviations: 1199982213062.7935
[2026-03-25 23:58:51] 2026-03-26 03:58:14,842 | INFO     | sum of deviations: 773816466279.085
[2026-03-25 23:58:51] 2026-03-26 03:58:14,842 | INFO     | mean x: 1774448973.5700636
[2026-03-25 23:58:51] 2026-03-26 03:58:14,842 | INFO     | mean y: 2529887.8401273885
[2026-03-25 23:58:51] 2026-03-26 03:58:14,842 | INFO     | intersect: -1141735268.2373848
[2026-03-25 23:58:51] 2026-03-26 03:58:14,844 | INFO     | chi2: 1.7695746235151883
[2026-03-25 23:58:51] 2026-03-26 03:58:14,844 | INFO     | current chi2=1.7695746235151883 (change=0.00021829033562890054 %)
[2026-03-25 23:58:51] 2026-03-26 03:58:14,844 | INFO     | right removable region: 1569
[2026-03-25 23:58:51] 2026-03-26 03:58:14,846 | INFO     | sum of square deviations: 1211483528060.3162
[2026-03-25 23:58:51] 2026-03-26 03:58:14,894 | INFO     | sum of deviations: 385664299612.9715
[2026-03-25 23:58:51] 2026-03-26 03:58:14,895 | INFO     | mean x: 1774449431.0698414
[2026-03-25 23:58:51] 2026-03-26 03:58:14,895 | INFO     | mean y: 2532701.4457142856
[2026-03-25 23:58:51] 2026-03-26 03:58:14,895 | INFO     | intersect: -562346458.015804
[2026-03-25 23:58:51] 2026-03-26 03:58:14,897 | INFO     | chi2: 0.7604145533752695
[2026-03-25 23:58:51] 2026-03-26 03:58:14,897 | INFO     | current chi2=0.7604145533752695 (change=69.10423723233076 %)
[2026-03-25 23:58:51] 2026-03-26 03:58:14,899 | INFO     | sum of square deviations: 1199982078862.794
[2026-03-25 23:58:51] 2026-03-26 03:58:14,947 | INFO     | sum of deviations: 325267044558.3349
[2026-03-25 23:58:51] 2026-03-26 03:58:14,947 | INFO     | mean x: 1774449583.5700636
[2026-03-25 23:58:51] 2026-03-26 03:58:14,947 | INFO     | mean y: 2533501.5560509553
[2026-03-25 23:58:51] 2026-03-26 03:58:14,948 | INFO     | intersect: -478448658.03801435
[2026-03-25 23:58:51] 2026-03-26 03:58:14,949 | INFO     | chi2: 0.7006284152052833
[2026-03-25 23:58:51] 2026-03-26 03:58:14,950 | INFO     | current chi2=0.7006284152052833 (change=7.8623085137721445 %)
[2026-03-25 23:58:51] 2026-03-26 03:58:14,950 | INFO     | left removable region: 20
[2026-03-25 23:58:51] 2026-03-26 03:58:14,952 | INFO     | sum of square deviations: 1152471049944.47
[2026-03-25 23:58:51] 2026-03-26 03:58:14,995 | INFO     | sum of deviations: 386966267744.6032
[2026-03-25 23:58:51] 2026-03-26 03:58:14,995 | INFO     | mean x: 1774449553.0697224
[2026-03-25 23:58:51] 2026-03-26 03:58:14,995 | INFO     | mean y: 2535031.3092317623
[2026-03-25 23:58:51] 2026-03-26 03:58:14,995 | INFO     | intersect: -593273532.2859709
[2026-03-25 23:58:51] 2026-03-26 03:58:14,997 | INFO     | chi2: 0.003637392686638337
[2026-03-25 23:58:51] 2026-03-26 03:58:14,997 | INFO     | current memory leak: 0.34 B/s (using 1549 data points, chi2=0.00)
[2026-03-25 23:58:51] 2026-03-26 03:58:14,999 | INFO     | could have reported an average CPU frequency of 2626 MHz (57 samples)
[2026-03-25 23:58:51] 2026-03-26 03:58:14,999 | INFO     | ..............................
[2026-03-25 23:58:51] 2026-03-26 03:58:14,999 | INFO     | . Timing measurements:
[2026-03-25 23:58:51] 2026-03-26 03:58:14,999 | INFO     | . get job = 0 s
[2026-03-25 23:58:51] 2026-03-26 03:58:14,999 | INFO     | . initial setup = 3 s
[2026-03-25 23:58:51] 2026-03-26 03:58:14,999 | INFO     | . payload setup = 18 s
[2026-03-25 23:58:51] 2026-03-26 03:58:14,999 | INFO     | . stage-in = 0 s
[2026-03-25 23:58:51] 2026-03-26 03:58:14,999 | INFO     | . payload execution = 96376 s
[2026-03-25 23:58:51] 2026-03-26 03:58:14,999 | INFO     | . stage-out = 5 s
[2026-03-25 23:58:51] 2026-03-26 03:58:15,000 | INFO     | . log creation = 1 s
[2026-03-25 23:58:51] 2026-03-26 03:58:15,000 | INFO     | ..............................
[2026-03-25 23:58:51] 2026-03-26 03:58:15,008 | INFO     | time since job start (96410s) is within the limit (345600.0s)
[2026-03-25 23:58:51] 2026-03-26 03:58:15,308 | INFO     | 
[2026-03-25 23:58:51] 2026-03-26 03:58:15,308 | INFO     | job summary report
[2026-03-25 23:58:51] 2026-03-26 03:58:15,308 | INFO     | --------------------------------------------------
[2026-03-25 23:58:51] 2026-03-26 03:58:15,308 | INFO     | PanDA job id: 7056915819
[2026-03-25 23:58:51] 2026-03-26 03:58:15,308 | INFO     | task id: 49177127
[2026-03-25 23:58:51] 2026-03-26 03:58:15,308 | INFO     | errors: (none)
[2026-03-25 23:58:51] 2026-03-26 03:58:15,308 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 23:58:51] 2026-03-26 03:58:15,308 | INFO     | pilot state: finished 
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | transexitcode: 0
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | exeerrorcode: 0
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | exeerrordiag: 
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | exitcode: 0
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | exitmsg: OK
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | cpuconsumptiontime: 114379 s
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | nevents: 400
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | neventsw: 0
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | pid: 1514038
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | pgrp: 1514038
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | corecount: 8
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | event service: False
[2026-03-25 23:58:51] 2026-03-26 03:58:15,309 | INFO     | sizes: {0: 2279857, 1: 2280318, 96398: 2347306, 96399: 2347305, 96404: 2356359, 96405: 2356415, 96408: 2356737}
[2026-03-25 23:58:51] 2026-03-26 03:58:15,310 | INFO     | --------------------------------------------------
[2026-03-25 23:58:51] 2026-03-26 03:58:15,310 | INFO     | 
[2026-03-25 23:58:51] 2026-03-26 03:58:15,310 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-25 23:58:51] 2026-03-26 03:58:15,448 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,448 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,449 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,450 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,450 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,450 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,450 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,450 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 23:58:51] 2026-03-26 03:58:15,450 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,450 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 23:58:51] 2026-03-26 03:58:15,450 | INFO     | job 7056915819 has completed (purged errors)
[2026-03-25 23:58:51] 2026-03-26 03:58:15,450 | INFO     | overall cleanup function is called
[2026-03-25 23:58:51] 2026-03-26 03:58:16,486 | INFO     | --- collectZombieJob: --- 10, [1514038]
[2026-03-25 23:58:51] 2026-03-26 03:58:16,486 | INFO     | zombie collector waiting for pid 1514038
[2026-03-25 23:58:51] 2026-03-26 03:58:16,486 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 23:58:51] 2026-03-26 03:58:16,486 | INFO     | collected zombie processes
[2026-03-25 23:58:51] 2026-03-26 03:58:16,486 | INFO     | will attempt to kill all subprocesses of pid=1514038
[2026-03-25 23:58:51] 2026-03-26 03:58:19,121 | INFO     | process IDs to be killed: [1514038] (in reverse order)
[2026-03-25 23:58:51] 2026-03-26 03:58:19,346 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 23:58:51] 2026-03-26 03:58:19,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 23:58:51] 2026-03-26 03:58:19,393 | INFO     | did not find any defunct processes belonging to 1514038
[2026-03-25 23:58:51] 2026-03-26 03:58:19,414 | INFO     | did not find any defunct processes belonging to 1514038
[2026-03-25 23:58:51] 2026-03-26 03:58:19,414 | INFO     | ready for new job
[2026-03-25 23:58:51] 2026-03-26 03:58:19,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 23:58:51] 2026-03-26 03:58:19,420 | INFO     | **************************************
[2026-03-25 23:58:51] 2026-03-26 03:58:19,420 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 23:58:51] 2026-03-26 03:58:19,420 | INFO     | **************************************
[2026-03-25 23:58:51] 2026-03-26 03:58:19,420 | INFO     | 
[2026-03-25 23:58:51] 2026-03-26 03:58:19,426 | INFO     | architecture information:
[2026-03-25 23:58:51] 2026-03-26 03:58:19,426 | INFO     | executing command: cat /etc/os-release
[2026-03-25 23:58:51] 2026-03-26 03:58:19,444 | INFO     | cat /etc/os-release:
[2026-03-25 23:58:51] NAME="CentOS Linux"
[2026-03-25 23:58:51] VERSION="7 (Core)"
[2026-03-25 23:58:51] ID="centos"
[2026-03-25 23:58:51] ID_LIKE="rhel fedora"
[2026-03-25 23:58:51] VERSION_ID="7"
[2026-03-25 23:58:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 23:58:51] ANSI_COLOR="0;31"
[2026-03-25 23:58:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 23:58:51] HOME_URL="https://www.centos.org/"
[2026-03-25 23:58:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 23:58:51] 
[2026-03-25 23:58:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 23:58:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 23:58:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 23:58:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 23:58:51] 
[2026-03-25 23:58:51] 2026-03-26 03:58:19,444 | INFO     | **************************************
[2026-03-25 23:58:51] 2026-03-26 03:58:19,956 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-25 23:58:51] 2026-03-26 03:58:20,097 | INFO     | sufficient remaining disk space (70303875072 B)
[2026-03-25 23:58:51] 2026-03-26 03:58:20,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 23:58:51] 2026-03-26 03:58:20,099 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 23:58:51] 2026-03-26 03:58:20,099 | INFO     | update_server=False
[2026-03-25 23:58:51] 2026-03-26 03:58:20,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 23:58:51] 2026-03-26 03:58:20,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 23:58:51] 2026-03-26 03:58:20,174 | INFO     | all data control threads have been joined
[2026-03-25 23:58:51] 2026-03-26 03:58:20,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 23:58:51] 2026-03-26 03:58:20,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 23:58:51] 2026-03-26 03:58:20,484 | INFO     | aborting loop
[2026-03-25 23:58:51] 2026-03-26 03:58:20,543 | INFO     | all job control threads have been joined
[2026-03-25 23:58:51] 2026-03-26 03:58:20,631 | INFO     | all payload control threads have been joined
[2026-03-25 23:58:51] 2026-03-26 03:58:21,129 | INFO     | [job] retrieve thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:21,180 | INFO     | [data] control thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:21,234 | INFO     | [job] queue monitor thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:21,246 | INFO     | [job] validate thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:21,491 | INFO     | [job] job monitor thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:21,561 | INFO     | [job] control thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:21,636 | INFO     | [payload] control thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:21,681 | INFO     | [payload] validate_post thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:21,776 | INFO     | [payload] failed_post thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:21,932 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:22,082 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:22,108 | INFO     | [data] copytool_out thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:22,455 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:22,455 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:22,456 | INFO     | [data] copytool_in thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:23,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 23:58:51] 2026-03-26 03:58:27,062 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 23:58:51] 2026-03-26 03:58:34,614 | INFO     | [monitor] cgroup control has ended
[2026-03-25 23:58:51] 2026-03-26 03:58:35,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558790543168)>', '<ExcThread(monitor, started 140558265722624)>']
[2026-03-25 23:58:51] 2026-03-26 03:58:40,939 | INFO     | all workflow threads have been joined
[2026-03-25 23:58:51] 2026-03-26 03:58:40,939 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 23:58:51] 2026-03-26 03:58:40,939 | INFO     | traces error code: 0
[2026-03-25 23:58:51] 2026-03-26 03:58:40,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 23:58:51] 2026-03-26 03:58:49,920 | INFO     | PID=1498906 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 23:58:51] 2026-03-26 03:58:49,921 | INFO     | .. there are 39 such processes running
[2026-03-25 23:58:51] 2026-03-26 03:58:49,921 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 23:58:51] 2026-03-26 03:58:49,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 23:58:51] 2026-03-26 03:58:49,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 23:58:51] 2026-03-26 03:58:49,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 23:58:51] 2026-03-26 03:58:49,922 | INFO     | [monitor] control thread has ended
[2026-03-25 23:58:51] 2026-03-26 03:58:50,097 [wrapper] ==== pilot stdout END ====
[2026-03-25 23:58:51] 2026-03-26 03:58:50,111 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 23:58:51] 2026-03-26 03:58:50,137 [wrapper] pilotpid: 1498906
[2026-03-25 23:58:51] 2026-03-26 03:58:50,160 [wrapper] Pilot exit status: 0
[2026-03-25 23:58:51] 2026-03-26 03:58:50,287 [wrapper] pandaids: 7056915819 7056915819
[2026-03-25 23:58:51] 2026-03-26 03:58:50,556 [wrapper] cleanup supervisor_pilot 3028278 1498907
[2026-03-25 23:58:51] 2026-03-26 03:58:50,564 [wrapper] Test setup, not cleaning
[2026-03-25 23:58:51] 2026-03-26 03:58:50,575 [wrapper] apfmon messages muted
[2026-03-25 23:58:51] 2026-03-26 03:58:50,621 [wrapper] ==== wrapper stdout END ====
[2026-03-25 23:58:51] 2026-03-26 03:58:50,634 [wrapper] ==== wrapper stderr END ====
[2026-03-25 23:58:51]  *** Error codes and diagnostics ***
[2026-03-25 23:58:51]     "exeErrorCode": 0,
[2026-03-25 23:58:51]     "exeErrorDiag": "",
[2026-03-25 23:58:51]     "pilotErrorCode": 0,
[2026-03-25 23:58:51]     "pilotErrorDiag": "",
[2026-03-25 23:58:51]  *** Listing of results directory ***
[2026-03-25 23:58:51] total 742768
[2026-03-25 23:58:51] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 09:19 pilot3.tar.gz
[2026-03-25 23:58:51] -rwx------. 1 boincer umatlas     36322 Mar 16 09:32 runpilot2-wrapper.sh
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas       100 Mar 24 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 23:58:51] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 24 13:49 run_atlas
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas       105 Mar 24 13:49 job.xml
[2026-03-25 23:58:51] -rw-r--r--. 3 boincer umatlas 242287962 Mar 24 13:49 EVNT.49136573._000030.pool.root.1
[2026-03-25 23:58:51] -rw-r--r--. 3 boincer umatlas 242287962 Mar 24 13:49 ATLAS.root_0
[2026-03-25 23:58:51] drwxrwx--x. 2 boincer umatlas      4096 Mar 24 13:49 shared
[2026-03-25 23:58:51] -rw-r--r--. 2 boincer umatlas    596141 Mar 24 13:49 input.tar.gz
[2026-03-25 23:58:51] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 13:49 start_atlas.sh
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas         0 Mar 24 13:49 boinc_lockfile
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas      2604 Mar 24 21:11 pandaJob.out
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas        57 Mar 24 21:11 setup.sh.local
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas      5111 Mar 24 21:11 queuedata.json
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas   1010852 Mar 24 21:11 agis_schedconf.cvmfs.json
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas       443 Mar 24 21:11 workernode_map.json
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas      6877 Mar 25 23:54 init_data.xml
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas 248243596 Mar 25 23:56 HITS.49177127._000735.pool.root.1
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas       532 Mar 25 23:56 boinc_task_state.xml
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas      1046 Mar 25 23:58 memory_monitor_summary.json
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas   1511579 Mar 25 23:58 agis_ddmendpoints.agis.ALL.json
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas   1376656 Mar 25 23:58 log.49177127._000735.job.log.tgz.1
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas      6409 Mar 25 23:58 heartbeat.json
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas      8192 Mar 25 23:58 boinc_mmap_file
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas        29 Mar 25 23:58 wrapper_checkpoint.txt
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas        96 Mar 25 23:58 pilot_heartbeat.json
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas       823 Mar 25 23:58 pilotlog.txt
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas  10531783 Mar 25 23:58 log.49177127._000735.job.log.1
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas       357 Mar 25 23:58 output.list
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas       620 Mar 25 23:58 runtime_log
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas  11929600 Mar 25 23:58 result.tar.gz
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas      9432 Mar 25 23:58 runtime_log.err
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas       785 Mar 25 23:58 6RONDmmENM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmdDxLDmhFRfJm.diag
[2026-03-25 23:58:51] -rw-r--r--. 1 boincer umatlas     23437 Mar 25 23:58 stderr.txt
[2026-03-25 23:58:51] HITS file was successfully produced:
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas 248243596 Mar 25 23:56 shared/HITS.pool.root.1
[2026-03-25 23:58:51]  *** Contents of shared directory: ***
[2026-03-25 23:58:51] total 491300
[2026-03-25 23:58:51] -rw-r--r--. 3 boincer umatlas 242287962 Mar 24 13:49 ATLAS.root_0
[2026-03-25 23:58:51] -rw-r--r--. 2 boincer umatlas    596141 Mar 24 13:49 input.tar.gz
[2026-03-25 23:58:51] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 13:49 start_atlas.sh
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas 248243596 Mar 25 23:56 HITS.pool.root.1
[2026-03-25 23:58:51] -rw-------. 1 boincer umatlas  11929600 Mar 25 23:58 result.tar.gz
23:58:53 (1478232): run_atlas exited; CPU time 119849.152618
23:58:53 (1478232): called boinc_finish(0)

</stderr_txt>
]]>

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