Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:28:25 (31330): wrapper (7.7.26015): starting
19:28:25 (31330): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 19:28:25] Arguments: --nthreads 8
[2026-03-24 19:28:25] Threads: 8
[2026-03-24 19:28:25] Checking for CVMFS
[2026-03-24 19:28:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 19:28:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 19:28:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 19:28:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 19:28:25] 2.11.0.0 4268 235775 89852 157653 3 11 3619646 4096000 917 130560 2 31350854 99.684 17039201 451 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 19:28:25] CVMFS is ok
[2026-03-24 19:28:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 19:28:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 19:28:25] Further information can be found at the LHC@home message board.
[2026-03-24 19:28:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 19:28:25] Checking for apptainer binary...
[2026-03-24 19:28:25] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 19:28:25] apptainer is not installed, using version from CVMFS
[2026-03-24 19:28:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 19:28:25] WARNING: Environment variable TMPDIR already has value [/tmp/job_11385389/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node267
[2026-03-24 19:28:25] apptainer works
[2026-03-24 19:28:25] Set ATHENA_PROC_NUMBER=8
[2026-03-24 19:28:25] Set ATHENA_CORE_NUMBER=8
[2026-03-24 19:28:25] Starting ATLAS job with PandaID=7056916296
[2026-03-24 19:28:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11385389/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 21:33:51]  *** The last 200 lines of the pilot log: ***
[2026-03-24 21:33:51] 2026-03-24 20:33:13,896 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 21:33:51] 2026-03-24 20:33:13,896 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 21:33:51] 2026-03-24 20:33:13,896 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 21:33:51] 2026-03-24 20:33:13,896 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 21:33:51] 2026-03-24 20:33:13,897 | INFO     | fitting pss+swap vs Time
[2026-03-24 21:33:51] 2026-03-24 20:33:13,898 | INFO     | sum of square deviations: 576985702.0
[2026-03-24 21:33:51] 2026-03-24 20:33:13,898 | INFO     | sum of deviations: -30216558559.0
[2026-03-24 21:33:51] 2026-03-24 20:33:13,898 | INFO     | mean x: 1774380651.0
[2026-03-24 21:33:51] 2026-03-24 20:33:13,898 | INFO     | mean y: 2613788.5691056913
[2026-03-24 21:33:51] 2026-03-24 20:33:13,898 | INFO     | intersect: 92926366770.74966
[2026-03-24 21:33:51] 2026-03-24 20:33:13,898 | INFO     | chi2: 2.0076524853827373
[2026-03-24 21:33:51] 2026-03-24 20:33:13,898 | INFO     | sum of square deviations: 509440249.5
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | sum of deviations: -20795059301.5
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | mean x: 1774380498.5
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | mean y: 2634487.466101695
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | intersect: 72431830503.97093
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | chi2: 1.332338810381342
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | current chi2=1.332338810381342 (change=33.636980499274706 %)
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | sum of square deviations: 447383272.0
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | sum of deviations: -19251467508.0
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | mean x: 1774380346.0
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | mean y: 2638282.9911504425
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | intersect: 76356466679.71492
[2026-03-24 21:33:51] 2026-03-24 20:33:13,899 | INFO     | chi2: 1.3252784716653152
[2026-03-24 21:33:51] 2026-03-24 20:33:13,900 | INFO     | current chi2=1.3252784716653152 (change=0.5299206674018629 %)
[2026-03-24 21:33:51] 2026-03-24 20:33:13,900 | INFO     | right removable region: 112
[2026-03-24 21:33:51] 2026-03-24 20:33:13,900 | INFO     | sum of square deviations: 509440249.5
[2026-03-24 21:33:51] 2026-03-24 20:33:13,900 | INFO     | sum of deviations: -41250661533.00001
[2026-03-24 21:33:51] 2026-03-24 20:33:13,900 | INFO     | mean x: 1774380803.5
[2026-03-24 21:33:51] 2026-03-24 20:33:13,900 | INFO     | mean y: 2637867.86440678
[2026-03-24 21:33:51] 2026-03-24 20:33:13,900 | INFO     | intersect: 143678725549.7253
[2026-03-24 21:33:51] 2026-03-24 20:33:13,900 | INFO     | chi2: 0.925543420781302
[2026-03-24 21:33:51] 2026-03-24 20:33:13,900 | INFO     | current chi2=0.925543420781302 (change=53.89922172686887 %)
[2026-03-24 21:33:51] 2026-03-24 20:33:13,900 | INFO     | sum of square deviations: 447383272.0
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | sum of deviations: -35911927747.0
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | mean x: 1774380956.0
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | mean y: 2624729.1858407077
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | intersect: 142434058078.63123
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | chi2: 0.9241434785351291
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | current chi2=0.9241434785351291 (change=0.15125624738287638 %)
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | left removable region: 20
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | sum of square deviations: 241429643.0
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | sum of deviations: -14597501360.999998
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | mean x: 1774380925.5
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | mean y: 2616935.5217391304
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | intersect: 107286576158.86652
[2026-03-24 21:33:51] 2026-03-24 20:33:13,901 | INFO     | chi2: 0.17285304694396264
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | current memory leak: -60.46 B/s (using 92 data points, chi2=0.17)
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | could have reported an average CPU frequency of 2548 MHz (8 samples)
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | ..............................
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | . Timing measurements:
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | . get job = 0 s
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | . initial setup = 2 s
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | . payload setup = 4 s
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | . stage-in = 0 s
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | . payload execution = 7460 s
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | . stage-out = 0 s
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | . log creation = 0 s
[2026-03-24 21:33:51] 2026-03-24 20:33:13,902 | INFO     | ..............................
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | 
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | job summary report
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | --------------------------------------------------
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | PanDA job id: 7056916296
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | task id: 49177170
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | errors: (none)
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | pilot state: finished 
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | transexitcode: 0
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | exeerrorcode: 0
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | exeerrordiag: 
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | exitcode: 0
[2026-03-24 21:33:51] 2026-03-24 20:33:14,100 | INFO     | exitmsg: OK
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | cpuconsumptiontime: 55065 s
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | nevents: 400
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | neventsw: 0
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | pid: 7564
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | pgrp: 7564
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | corecount: 8
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | event service: False
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | sizes: {0: 2280439, 11: 2280439, 7468: 2308039, 7469: 2317261}
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | --------------------------------------------------
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | 
[2026-03-24 21:33:51] 2026-03-24 20:33:14,101 | INFO     | executing command: ls -lF /tmp/job_11385389/atlas/pilot/slots/0
[2026-03-24 21:33:51] 2026-03-24 20:33:14,109 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,109 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,109 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,109 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | job 7056916296 has completed (purged errors)
[2026-03-24 21:33:51] 2026-03-24 20:33:14,110 | INFO     | overall cleanup function is called
[2026-03-24 21:33:51] 2026-03-24 20:33:15,116 | INFO     | --- collectZombieJob: --- 10, [7564]
[2026-03-24 21:33:51] 2026-03-24 20:33:15,116 | INFO     | zombie collector waiting for pid 7564
[2026-03-24 21:33:51] 2026-03-24 20:33:15,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 21:33:51] 2026-03-24 20:33:15,116 | INFO     | collected zombie processes
[2026-03-24 21:33:51] 2026-03-24 20:33:15,116 | INFO     | will attempt to kill all subprocesses of pid=7564
[2026-03-24 21:33:51] 2026-03-24 20:33:15,279 | INFO     | process IDs to be killed: [7564] (in reverse order)
[2026-03-24 21:33:51] 2026-03-24 20:33:15,320 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 21:33:51] 2026-03-24 20:33:15,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 21:33:51] 2026-03-24 20:33:15,328 | INFO     | did not find any defunct processes belonging to 7564
[2026-03-24 21:33:51] 2026-03-24 20:33:15,335 | INFO     | did not find any defunct processes belonging to 7564
[2026-03-24 21:33:51] 2026-03-24 20:33:15,335 | INFO     | ready for new job
[2026-03-24 21:33:51] 2026-03-24 20:33:15,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 21:33:51] 2026-03-24 20:33:15,336 | INFO     | **************************************
[2026-03-24 21:33:51] 2026-03-24 20:33:15,336 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 21:33:51] 2026-03-24 20:33:15,336 | INFO     | **************************************
[2026-03-24 21:33:51] 2026-03-24 20:33:15,336 | INFO     | 
[2026-03-24 21:33:51] 2026-03-24 20:33:15,346 | WARNING  | process 7564 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 21:33:51] 2026-03-24 20:33:15,351 | INFO     | architecture information:
[2026-03-24 21:33:51] 2026-03-24 20:33:15,351 | INFO     | executing command: cat /etc/os-release
[2026-03-24 21:33:51] 2026-03-24 20:33:15,361 | INFO     | cat /etc/os-release:
[2026-03-24 21:33:51] NAME="CentOS Linux"
[2026-03-24 21:33:51] VERSION="7 (Core)"
[2026-03-24 21:33:51] ID="centos"
[2026-03-24 21:33:51] ID_LIKE="rhel fedora"
[2026-03-24 21:33:51] VERSION_ID="7"
[2026-03-24 21:33:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 21:33:51] ANSI_COLOR="0;31"
[2026-03-24 21:33:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 21:33:51] HOME_URL="https://www.centos.org/"
[2026-03-24 21:33:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 21:33:51] 
[2026-03-24 21:33:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 21:33:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 21:33:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 21:33:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 21:33:51] 
[2026-03-24 21:33:51] 2026-03-24 20:33:15,361 | INFO     | **************************************
[2026-03-24 21:33:51] 2026-03-24 20:33:15,444 | INFO     | using path: /tmp/job_11385389/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 21:33:51] 2026-03-24 20:33:15,555 | INFO     | number of running child processes to parent process 7564: 1
[2026-03-24 21:33:51] 2026-03-24 20:33:15,556 | INFO     | maximum number of monitored processes: 6
[2026-03-24 21:33:51] 2026-03-24 20:33:15,556 | INFO     | aborting job monitoring since job object (job id=7056916296) has expired
[2026-03-24 21:33:51] 2026-03-24 20:33:15,864 | INFO     | executing command: df -mP /tmp/job_11385389/atlas/pilot/slots/0
[2026-03-24 21:33:51] 2026-03-24 20:33:15,871 | INFO     | sufficient remaining disk space (224558841856 B)
[2026-03-24 21:33:51] 2026-03-24 20:33:15,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 21:33:51] 2026-03-24 20:33:15,871 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 21:33:51] 2026-03-24 20:33:15,871 | INFO     | update_server=False
[2026-03-24 21:33:51] 2026-03-24 20:33:15,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 21:33:51] 2026-03-24 20:33:15,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 21:33:51] 2026-03-24 20:33:15,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 21:33:51] 2026-03-24 20:33:15,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 21:33:51] 2026-03-24 20:33:15,872 | INFO     | will abort loop
[2026-03-24 21:33:51] 2026-03-24 20:33:16,334 | INFO     | all data control threads have been joined
[2026-03-24 21:33:51] 2026-03-24 20:33:16,439 | INFO     | all job control threads have been joined
[2026-03-24 21:33:51] 2026-03-24 20:33:16,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 21:33:51] 2026-03-24 20:33:16,876 | INFO     | [job] queue monitor thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:16,877 | INFO     | [job] retrieve thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:16,877 | INFO     | [job] job monitor thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:16,904 | INFO     | [data] copytool_in thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:17,146 | INFO     | all payload control threads have been joined
[2026-03-24 21:33:51] 2026-03-24 20:33:17,340 | INFO     | [data] control thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:17,444 | INFO     | [job] control thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:17,676 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:18,024 | INFO     | [payload] validate_post thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:18,044 | INFO     | [job] validate thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:18,087 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:18,152 | INFO     | [payload] control thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:18,279 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:18,359 | INFO     | [payload] failed_post thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:18,463 | INFO     | [data] copytool_out thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:19,877 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:25,950 | INFO     | job.realtimelogging is not enabled
[2026-03-24 21:33:51] 2026-03-24 20:33:26,955 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 21:33:51] 2026-03-24 20:33:44,826 | INFO     | [monitor] cgroup control has ended
[2026-03-24 21:33:51] 2026-03-24 20:33:45,987 | INFO     | PID=2886 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-24 21:33:51] 2026-03-24 20:33:45,987 | INFO     | .. there are 5 such processes running
[2026-03-24 21:33:51] 2026-03-24 20:33:45,987 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 21:33:51] 2026-03-24 20:33:45,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 21:33:51] 2026-03-24 20:33:45,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 21:33:51] 2026-03-24 20:33:46,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-24 21:33:51] 2026-03-24 20:33:46,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 21:33:51] 2026-03-24 20:33:46,992 | INFO     | [monitor] control thread has ended
[2026-03-24 21:33:51] 2026-03-24 20:33:51,178 | INFO     | all workflow threads have been joined
[2026-03-24 21:33:51] 2026-03-24 20:33:51,178 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 21:33:51] 2026-03-24 20:33:51,178 | INFO     | traces error code: 0
[2026-03-24 21:33:51] 2026-03-24 20:33:51,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 21:33:51] 2026-03-24 20:33:51,232 [wrapper] ==== pilot stdout END ====
[2026-03-24 21:33:51] 2026-03-24 20:33:51,233 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 21:33:51] 2026-03-24 20:33:51,234 [wrapper] pilotpid: 2886
[2026-03-24 21:33:51] 2026-03-24 20:33:51,235 [wrapper] Pilot exit status: 0
[2026-03-24 21:33:51] 2026-03-24 20:33:51,239 [wrapper] pandaids: 7056916296
[2026-03-24 21:33:51] 2026-03-24 20:33:51,262 [wrapper] cleanup supervisor_pilot  6224 2887
[2026-03-24 21:33:51] 2026-03-24 20:33:51,263 [wrapper] Test setup, not cleaning
[2026-03-24 21:33:51] 2026-03-24 20:33:51,264 [wrapper] apfmon messages muted
[2026-03-24 21:33:51] 2026-03-24 20:33:51,265 [wrapper] ==== wrapper stdout END ====
[2026-03-24 21:33:51] 2026-03-24 20:33:51,266 [wrapper] ==== wrapper stderr END ====
[2026-03-24 21:33:51]  *** Error codes and diagnostics ***
[2026-03-24 21:33:51]     "exeErrorCode": 0,
[2026-03-24 21:33:51]     "exeErrorDiag": "",
[2026-03-24 21:33:51]     "pilotErrorCode": 0,
[2026-03-24 21:33:51]     "pilotErrorDiag": "",
[2026-03-24 21:33:51]  *** Listing of results directory ***
[2026-03-24 21:33:51] total 482932
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-24 21:33:51] -rwx------ 1 mf493845 unix-user     36322 Mar 16 14:32 runpilot2-wrapper.sh
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user       100 Mar 24 18:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 21:33:51] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 18:27 run_atlas
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user       105 Mar 24 18:27 job.xml
[2026-03-24 21:33:51] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 19:28 start_atlas.sh
[2026-03-24 21:33:51] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 19:28 shared
[2026-03-24 21:33:51] -rw-r--r-- 2 mf493845 unix-user    596141 Mar 24 19:28 input.tar.gz
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user      6390 Mar 24 19:28 init_data.xml
[2026-03-24 21:33:51] -rw-r--r-- 2 mf493845 unix-user 238126006 Mar 24 19:28 EVNT.49136756._000010.pool.root.1
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user         0 Mar 24 19:28 boinc_setup_complete
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user      8192 Mar 24 19:28 boinc_mmap_file
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user         0 Mar 24 19:28 boinc_lockfile
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user      2622 Mar 24 19:28 pandaJob.out
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user      5111 Mar 24 19:28 queuedata.json
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user   1010852 Mar 24 19:28 agis_schedconf.cvmfs.json
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user   1511579 Mar 24 19:28 agis_ddmendpoints.agis.ALL.json
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user       415 Mar 24 19:28 workernode_map.json
[2026-03-24 21:33:51] drwx------ 5 mf493845 unix-user       440 Mar 24 19:28 pilot3
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user 249566814 Mar 24 21:32 HITS.49177170._000233.pool.root.1
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user      1025 Mar 24 21:33 memory_monitor_summary.json
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user    361142 Mar 24 21:33 log.49177170._000233.job.log.tgz.1
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user      6313 Mar 24 21:33 heartbeat.json
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user        95 Mar 24 21:33 pilot_heartbeat.json
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user      5432 Mar 24 21:33 pilotlog.txt
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user   1096659 Mar 24 21:33 log.49177170._000233.job.log.1
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user       357 Mar 24 21:33 output.list
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user       620 Mar 24 21:33 runtime_log
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user   1474560 Mar 24 21:33 result.tar.gz
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user      9219 Mar 24 21:33 runtime_log.err
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user       646 Mar 24 21:33 LNTKDmvENM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmx2tLDm3x8Min.diag
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user     21461 Mar 24 21:33 stderr.txt
[2026-03-24 21:33:51] HITS file was successfully produced:
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user 249566814 Mar 24 21:32 shared/HITS.pool.root.1
[2026-03-24 21:33:51]  *** Contents of shared directory: ***
[2026-03-24 21:33:51] total 478308
[2026-03-24 21:33:51] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 19:28 start_atlas.sh
[2026-03-24 21:33:51] -rw-r--r-- 2 mf493845 unix-user    596141 Mar 24 19:28 input.tar.gz
[2026-03-24 21:33:51] -rw-r--r-- 2 mf493845 unix-user 238126006 Mar 24 19:28 ATLAS.root_0
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user 249566814 Mar 24 21:32 HITS.pool.root.1
[2026-03-24 21:33:51] -rw------- 1 mf493845 unix-user   1474560 Mar 24 21:33 result.tar.gz
21:33:52 (31330): run_atlas exited; CPU time 55171.828455
21:33:52 (31330): called boinc_finish(0)

</stderr_txt>
]]>

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