Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:35:03 (1159610): wrapper (7.7.26015): starting
13:35:03 (1159610): wrapper: running run_atlas (--nthreads 4)
[2026-03-25 13:35:03] Arguments: --nthreads 4
[2026-03-25 13:35:03] Threads: 4
[2026-03-25 13:35:03] Checking for CVMFS
[2026-03-25 13:35:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 13:35:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 13:35:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 13:35:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 13:35:03] 2.9.2.0 754497 3875 99232 157684 3 49 33048164 36864000 0 130560 0 1484026 99.982 135278 6375 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-25 13:35:03] CVMFS is ok
[2026-03-25 13:35:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 13:35:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 13:35:03] Further information can be found at the LHC@home message board.
[2026-03-25 13:35:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 13:35:03] Checking for apptainer binary...
[2026-03-25 13:35:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 13:35:03] Running /usr/bin/apptainer --version
[2026-03-25 13:35:03] apptainer version 1.4.1-1.1
[2026-03-25 13:35:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 13:35:04] thA319a
[2026-03-25 13:35:04] apptainer works
[2026-03-25 13:35:04] Set ATHENA_PROC_NUMBER=4
[2026-03-25 13:35:04] Set ATHENA_CORE_NUMBER=4
[2026-03-25 13:35:04] Starting ATLAS job with PandaID=7056915177
[2026-03-25 13:35:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 16:31:44]  *** The last 200 lines of the pilot log: ***
[2026-03-25 16:31:44] 2026-03-25 15:31:14,323 | INFO     | all data control threads have been joined
[2026-03-25 16:31:44] 2026-03-25 15:31:14,428 | INFO     | [job] retrieve thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:14,428 | INFO     | [job] queue monitor thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:14,472 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:14,480 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:14,548 | INFO     | [payload] failed_post thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:14,568 | INFO     | all job control threads have been joined
[2026-03-25 16:31:44] 2026-03-25 15:31:14,635 | INFO     | all payload control threads have been joined
[2026-03-25 16:31:44] 2026-03-25 15:31:14,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 16:31:44] 2026-03-25 15:31:14,697 | INFO     | [data] copytool_in thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:14,789 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:15,020 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:15,140 | INFO     | [payload] validate_post thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:15,232 | WARNING  | process 1168244 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 16:31:44] 2026-03-25 15:31:15,267 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 16:31:44] 2026-03-25 15:31:15,310 | INFO     | number of running child processes to parent process 1168244: 1
[2026-03-25 16:31:44] 2026-03-25 15:31:15,310 | INFO     | maximum number of monitored processes: 6
[2026-03-25 16:31:44] 2026-03-25 15:31:15,310 | INFO     | aborting job monitoring since job object (job id=7056915177) has expired
[2026-03-25 16:31:44] 2026-03-25 15:31:15,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 16:31:44] 2026-03-25 15:31:15,310 | INFO     | will abort loop
[2026-03-25 16:31:44] 2026-03-25 15:31:15,329 | INFO     | [data] control thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:15,574 | INFO     | [job] control thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:15,641 | INFO     | [payload] control thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:15,849 | INFO     | [job] validate thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:16,312 | INFO     | [job] job monitor thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:16,690 | INFO     | [data] copytool_out thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:17,429 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 16:31:44] 2026-03-25 15:31:32,709 | INFO     | [monitor] cgroup control has ended
[2026-03-25 16:31:44] 2026-03-25 15:31:34,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139828646647616)>', '<ExcThread(monitor, started 139827466979072)>']
[2026-03-25 16:31:44] 2026-03-25 15:31:39,577 | INFO     | all workflow threads have been joined
[2026-03-25 16:31:44] 2026-03-25 15:31:39,577 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 16:31:44] 2026-03-25 15:31:39,577 | INFO     | traces error code: 0
[2026-03-25 16:31:44] 2026-03-25 15:31:39,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 16:31:44] 2026-03-25 15:31:43,925 | INFO     | PID=1163727 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 16:31:44] 2026-03-25 15:31:43,925 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 16:31:44] 2026-03-25 15:31:43,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 16:31:44] 2026-03-25 15:31:43,925 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 16:31:44] 2026-03-25 15:31:43,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 16:31:44] 2026-03-25 15:31:43,925 | INFO     | [monitor] control thread has ended
[2026-03-25 16:31:44] 2026-03-25 15:31:44,000 [wrapper] ==== pilot stdout END ====
[2026-03-25 16:31:44] 2026-03-25 15:31:44,005 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 16:31:44] 2026-03-25 15:31:44,009 [wrapper] pilotpid: 1163727
[2026-03-25 16:31:44] 2026-03-25 15:31:44,013 [wrapper] Pilot exit status: 0
[2026-03-25 16:31:44] 2026-03-25 15:31:44,025 [wrapper] pandaids: 7056915177
[2026-03-25 16:31:44] 2026-03-25 15:31:44,048 [wrapper] cleanup supervisor_pilot 1175905 1163728
[2026-03-25 16:31:44] 2026-03-25 15:31:44,052 [wrapper] Test setup, not cleaning
[2026-03-25 16:31:44] 2026-03-25 15:31:44,057 [wrapper] apfmon messages muted
[2026-03-25 16:31:44] 2026-03-25 15:31:44,061 [wrapper] ==== wrapper stdout END ====
[2026-03-25 16:31:44] 2026-03-25 15:31:44,065 [wrapper] ==== wrapper stderr END ====
[2026-03-25 16:31:44]  *** Error codes and diagnostics ***
[2026-03-25 16:31:44]     "exeErrorCode": 0,
[2026-03-25 16:31:44]     "exeErrorDiag": "",
[2026-03-25 16:31:44]     "pilotErrorCode": 0,
[2026-03-25 16:31:44]     "pilotErrorDiag": "",
[2026-03-25 16:31:44]  *** Listing of results directory ***
[2026-03-25 16:31:44] total 478184
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-25 16:31:44] -rwx------ 1 boinc boinc     36322 Mar 16 14:32 runpilot2-wrapper.sh
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc       100 Mar 25 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 16:31:44] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 13:35 run_atlas
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc       105 Mar 25 13:35 job.xml
[2026-03-25 16:31:44] -rw-r--r-- 2 boinc boinc 242630749 Mar 25 13:35 EVNT.49136573._000015.pool.root.1
[2026-03-25 16:31:44] drwxrwx--x 2 boinc boinc      4096 Mar 25 13:35 shared
[2026-03-25 16:31:44] -rw-r--r-- 2 boinc boinc    596136 Mar 25 13:35 input.tar.gz
[2026-03-25 16:31:44] -rw-r--r-- 2 boinc boinc     15845 Mar 25 13:35 start_atlas.sh
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc         0 Mar 25 13:35 boinc_setup_complete
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc      6366 Mar 25 13:35 init_data.xml
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc         0 Mar 25 13:35 boinc_lockfile
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc      2605 Mar 25 13:35 pandaJob.out
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc      5111 Mar 25 13:35 queuedata.json
[2026-03-25 16:31:44] -rw------- 1 boinc boinc   1011913 Mar 25 13:35 agis_schedconf.cvmfs.json
[2026-03-25 16:31:44] -rw------- 1 boinc boinc   1511579 Mar 25 13:35 agis_ddmendpoints.agis.ALL.json
[2026-03-25 16:31:44] -rw------- 1 boinc boinc       420 Mar 25 13:35 workernode_map.json
[2026-03-25 16:31:44] drwx------ 5 boinc boinc      4096 Mar 25 13:35 pilot3
[2026-03-25 16:31:44] -rw------- 1 boinc boinc 239439485 Mar 25 16:30 HITS.49177127._000355.pool.root.1
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc       531 Mar 25 16:30 boinc_task_state.xml
[2026-03-25 16:31:44] -rw------- 1 boinc boinc      1037 Mar 25 16:31 memory_monitor_summary.json
[2026-03-25 16:31:44] -rw------- 1 boinc boinc    337674 Mar 25 16:31 log.49177127._000355.job.log.tgz.1
[2026-03-25 16:31:44] -rw------- 1 boinc boinc      6309 Mar 25 16:31 heartbeat.json
[2026-03-25 16:31:44] -rw------- 1 boinc boinc        95 Mar 25 16:31 pilot_heartbeat.json
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc      8192 Mar 25 16:31 boinc_mmap_file
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc        28 Mar 25 16:31 wrapper_checkpoint.txt
[2026-03-25 16:31:44] -rw------- 1 boinc boinc       747 Mar 25 16:31 pilotlog.txt
[2026-03-25 16:31:44] -rw------- 1 boinc boinc   1494419 Mar 25 16:31 log.49177127._000355.job.log.1
[2026-03-25 16:31:44] -rw------- 1 boinc boinc       357 Mar 25 16:31 output.list
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc       620 Mar 25 16:31 runtime_log
[2026-03-25 16:31:44] -rw------- 1 boinc boinc   1853440 Mar 25 16:31 result.tar.gz
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc      8902 Mar 25 16:31 runtime_log.err
[2026-03-25 16:31:44] -rw------- 1 boinc boinc       661 Mar 25 16:31 duhMDmcENM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmpztLDmzqfVLo.diag
[2026-03-25 16:31:44] -rw-r--r-- 1 boinc boinc      7567 Mar 25 16:31 stderr.txt
[2026-03-25 16:31:44] HITS file was successfully produced:
[2026-03-25 16:31:44] -rw------- 1 boinc boinc 239439485 Mar 25 16:30 shared/HITS.pool.root.1
[2026-03-25 16:31:44]  *** Contents of shared directory: ***
[2026-03-25 16:31:44] total 473192
[2026-03-25 16:31:44] -rw-r--r-- 2 boinc boinc 242630749 Mar 25 13:35 ATLAS.root_0
[2026-03-25 16:31:44] -rw-r--r-- 2 boinc boinc    596136 Mar 25 13:35 input.tar.gz
[2026-03-25 16:31:44] -rw-r--r-- 2 boinc boinc     15845 Mar 25 13:35 start_atlas.sh
[2026-03-25 16:31:44] -rw------- 1 boinc boinc 239439485 Mar 25 16:30 HITS.pool.root.1
[2026-03-25 16:31:44] -rw------- 1 boinc boinc   1853440 Mar 25 16:31 result.tar.gz
16:32:06 (1159610): run_atlas exited; CPU time 40778.912652
16:32:06 (1159610): called boinc_finish(0)

</stderr_txt>
]]>

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