Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:58:20 (2397871): wrapper (7.7.26015): starting
09:58:20 (2397871): wrapper: running run_atlas (--nthreads 2)
[2026-03-25 09:58:20] Arguments: --nthreads 2
[2026-03-25 09:58:20] Threads: 2
[2026-03-25 09:58:20] Checking for CVMFS
[2026-03-25 09:58:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 09:58:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 09:58:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 09:58:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 09:58:22] 2.9.2.0 2167222 3858 54572 157676 3 49 33717776 36864000 0 130560 0 919436 99.973 130801 6983 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-25 09:58:22] CVMFS is ok
[2026-03-25 09:58:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 09:58:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 09:58:22] Further information can be found at the LHC@home message board.
[2026-03-25 09:58:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 09:58:22] Checking for apptainer binary...
[2026-03-25 09:58:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 09:58:22] Running /usr/bin/apptainer --version
[2026-03-25 09:58:22] apptainer version 1.4.1-1.1
[2026-03-25 09:58:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 09:58:22] thA334a
[2026-03-25 09:58:22] apptainer works
[2026-03-25 09:58:22] Set ATHENA_PROC_NUMBER=2
[2026-03-25 09:58:22] Set ATHENA_CORE_NUMBER=2
[2026-03-25 09:58:22] Starting ATLAS job with PandaID=7056911051
[2026-03-25 09:58:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 15:42:09]  *** The last 200 lines of the pilot log: ***
[2026-03-25 15:42:09] 2026-03-25 14:41:04,807 | INFO     | did not find any defunct processes belonging to 2406312
[2026-03-25 15:42:09] 2026-03-25 14:41:04,807 | INFO     | ready for new job
[2026-03-25 15:42:09] 2026-03-25 14:41:04,807 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 15:42:09] 2026-03-25 14:41:04,807 | INFO     | **************************************
[2026-03-25 15:42:09] 2026-03-25 14:41:04,808 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 15:42:09] 2026-03-25 14:41:04,808 | INFO     | **************************************
[2026-03-25 15:42:09] 2026-03-25 14:41:04,808 | INFO     | 
[2026-03-25 15:42:09] 2026-03-25 14:41:04,808 | INFO     | architecture information:
[2026-03-25 15:42:09] 2026-03-25 14:41:04,808 | INFO     | executing command: cat /etc/os-release
[2026-03-25 15:42:09] 2026-03-25 14:41:04,817 | INFO     | cat /etc/os-release:
[2026-03-25 15:42:09] NAME="CentOS Linux"
[2026-03-25 15:42:09] VERSION="7 (Core)"
[2026-03-25 15:42:09] ID="centos"
[2026-03-25 15:42:09] ID_LIKE="rhel fedora"
[2026-03-25 15:42:09] VERSION_ID="7"
[2026-03-25 15:42:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 15:42:09] ANSI_COLOR="0;31"
[2026-03-25 15:42:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 15:42:09] HOME_URL="https://www.centos.org/"
[2026-03-25 15:42:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 15:42:09] 
[2026-03-25 15:42:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 15:42:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 15:42:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 15:42:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 15:42:09] 
[2026-03-25 15:42:09] 2026-03-25 14:41:04,817 | INFO     | **************************************
[2026-03-25 15:42:09] 2026-03-25 14:41:05,320 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-25 15:42:09] 2026-03-25 14:41:05,333 | INFO     | sufficient remaining disk space (489927213056 B)
[2026-03-25 15:42:09] 2026-03-25 14:41:05,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 15:42:09] 2026-03-25 14:41:05,333 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 15:42:09] 2026-03-25 14:41:05,333 | INFO     | update_server=False
[2026-03-25 15:42:09] 2026-03-25 14:41:05,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 15:42:09] 2026-03-25 14:41:05,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 15:42:09] 2026-03-25 14:41:05,334 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-25 15:42:09] 2026-03-25 14:41:05,334 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 15:42:09] 2026-03-25 14:41:05,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 15:42:09] 2026-03-25 14:41:05,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 15:42:09] 2026-03-25 14:41:05,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 15:42:09] 2026-03-25 14:41:05,687 | INFO     | all data control threads have been joined
[2026-03-25 15:42:09] 2026-03-25 14:41:06,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 15:42:09] 2026-03-25 14:41:06,088 | INFO     | aborting loop
[2026-03-25 15:42:09] 2026-03-25 14:41:06,339 | INFO     | [job] retrieve thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:06,339 | INFO     | [job] queue monitor thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:06,492 | INFO     | all payload control threads have been joined
[2026-03-25 15:42:09] 2026-03-25 14:41:06,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 15:42:09] 2026-03-25 14:41:06,629 | INFO     | all job control threads have been joined
[2026-03-25 15:42:09] 2026-03-25 14:41:06,693 | INFO     | [data] control thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:06,882 | INFO     | [payload] failed_post thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:07,049 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:07,094 | INFO     | [job] job monitor thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:07,119 | INFO     | [job] validate thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:07,308 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:07,408 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:07,458 | INFO     | [data] copytool_in thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:07,491 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:07,498 | INFO     | [payload] control thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:07,635 | INFO     | [job] control thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:07,828 | INFO     | [payload] validate_post thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:08,612 | INFO     | [data] copytool_out thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:41:09,340 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 15:42:09] 2026-03-25 14:42:04,227 | INFO     | [monitor] cgroup control has ended
[2026-03-25 15:42:09] 2026-03-25 14:42:04,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140259203503936)>', '<ExcThread(monitor, started 140258716931840)>']
[2026-03-25 15:42:09] 2026-03-25 14:42:04,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 15:42:09] 2026-03-25 14:42:04,648 | INFO     | [monitor] control thread has ended
[2026-03-25 15:42:09] 2026-03-25 14:42:09,381 | INFO     | all workflow threads have been joined
[2026-03-25 15:42:09] 2026-03-25 14:42:09,384 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 15:42:09] 2026-03-25 14:42:09,384 | INFO     | traces error code: 0
[2026-03-25 15:42:09] 2026-03-25 14:42:09,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 15:42:09] 2026-03-25 14:42:09,427 [wrapper] ==== pilot stdout END ====
[2026-03-25 15:42:09] 2026-03-25 14:42:09,430 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 15:42:09] 2026-03-25 14:42:09,432 [wrapper] pilotpid: 2401901
[2026-03-25 15:42:09] 2026-03-25 14:42:09,435 [wrapper] Pilot exit status: 0
[2026-03-25 15:42:09] 2026-03-25 14:42:09,441 [wrapper] pandaids: 7056911051
[2026-03-25 15:42:09] 2026-03-25 14:42:09,456 [wrapper] cleanup supervisor_pilot 2412894 2401902
[2026-03-25 15:42:09] 2026-03-25 14:42:09,458 [wrapper] Test setup, not cleaning
[2026-03-25 15:42:09] 2026-03-25 14:42:09,460 [wrapper] apfmon messages muted
[2026-03-25 15:42:09] 2026-03-25 14:42:09,462 [wrapper] ==== wrapper stdout END ====
[2026-03-25 15:42:09] 2026-03-25 14:42:09,464 [wrapper] ==== wrapper stderr END ====
[2026-03-25 15:42:09]  *** Error codes and diagnostics ***
[2026-03-25 15:42:09]     "exeErrorCode": 0,
[2026-03-25 15:42:09]     "exeErrorDiag": "",
[2026-03-25 15:42:09]     "pilotErrorCode": 0,
[2026-03-25 15:42:09]     "pilotErrorDiag": "",
[2026-03-25 15:42:09]  *** Listing of results directory ***
[2026-03-25 15:42:09] total 487388
[2026-03-25 15:42:09] -rwx------ 1 boinc boinc     36322 Mar 16 14:17 runpilot2-wrapper.sh
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc       100 Mar 25 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 15:42:09] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 09:58 run_atlas
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc       105 Mar 25 09:58 job.xml
[2026-03-25 15:42:09] -rw-r--r-- 2 boinc boinc 243650550 Mar 25 09:58 EVNT.49135955._000020.pool.root.1
[2026-03-25 15:42:09] -rw-r--r-- 2 boinc boinc    597551 Mar 25 09:58 input.tar.gz
[2026-03-25 15:42:09] -rw-r--r-- 2 boinc boinc     15845 Mar 25 09:58 start_atlas.sh
[2026-03-25 15:42:09] drwxrwx--x 2 boinc boinc      4096 Mar 25 09:58 shared
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc         0 Mar 25 09:58 boinc_setup_complete
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc      6206 Mar 25 09:58 init_data.xml
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc         0 Mar 25 09:58 boinc_lockfile
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc      2634 Mar 25 09:58 pandaJob.out
[2026-03-25 15:42:09] -rw------- 1 boinc boinc   1010820 Mar 25 09:58 agis_schedconf.cvmfs.json
[2026-03-25 15:42:09] -rw------- 1 boinc boinc       418 Mar 25 09:58 workernode_map.json
[2026-03-25 15:42:09] drwx------ 5 boinc boinc      4096 Mar 25 09:58 pilot3
[2026-03-25 15:42:09] -rw------- 1 boinc boinc 244807867 Mar 25 15:40 HITS.49176974._000487.pool.root.1
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc       530 Mar 25 15:40 boinc_task_state.xml
[2026-03-25 15:42:09] -rw------- 1 boinc boinc      1017 Mar 25 15:40 memory_monitor_summary.json
[2026-03-25 15:42:09] -rw------- 1 boinc boinc   1511579 Mar 25 15:41 agis_ddmendpoints.agis.ALL.json
[2026-03-25 15:42:09] -rw------- 1 boinc boinc    455879 Mar 25 15:41 log.49176974._000487.job.log.tgz.1
[2026-03-25 15:42:09] -rw------- 1 boinc boinc        95 Mar 25 15:41 pilot_heartbeat.json
[2026-03-25 15:42:09] -rw------- 1 boinc boinc      6291 Mar 25 15:41 heartbeat.json
[2026-03-25 15:42:09] -rw------- 1 boinc boinc      4552 Mar 25 15:42 pilotlog.txt
[2026-03-25 15:42:09] -rw------- 1 boinc boinc   2892171 Mar 25 15:42 log.49176974._000487.job.log.1
[2026-03-25 15:42:09] -rw------- 1 boinc boinc       357 Mar 25 15:42 output.list
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc       620 Mar 25 15:42 runtime_log
[2026-03-25 15:42:09] -rw------- 1 boinc boinc   3368960 Mar 25 15:42 result.tar.gz
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc      8902 Mar 25 15:42 runtime_log.err
[2026-03-25 15:42:09] -rw------- 1 boinc boinc       662 Mar 25 15:42 gA6NDmc0MM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTzwLDmRcbt3n.diag
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc        28 Mar 25 15:42 wrapper_checkpoint.txt
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc      8192 Mar 25 15:42 boinc_mmap_file
[2026-03-25 15:42:09] -rw-r--r-- 1 boinc boinc      9559 Mar 25 15:42 stderr.txt
[2026-03-25 15:42:09] HITS file was successfully produced:
[2026-03-25 15:42:09] -rw------- 1 boinc boinc 244807867 Mar 25 15:40 shared/HITS.pool.root.1
[2026-03-25 15:42:09]  *** Contents of shared directory: ***
[2026-03-25 15:42:09] total 480908
[2026-03-25 15:42:09] -rw-r--r-- 2 boinc boinc 243650550 Mar 25 09:58 ATLAS.root_0
[2026-03-25 15:42:09] -rw-r--r-- 2 boinc boinc    597551 Mar 25 09:58 input.tar.gz
[2026-03-25 15:42:09] -rw-r--r-- 2 boinc boinc     15845 Mar 25 09:58 start_atlas.sh
[2026-03-25 15:42:09] -rw------- 1 boinc boinc 244807867 Mar 25 15:40 HITS.pool.root.1
[2026-03-25 15:42:09] -rw------- 1 boinc boinc   3368960 Mar 25 15:42 result.tar.gz
15:42:31 (2397871): run_atlas exited; CPU time 40471.269045
15:42:31 (2397871): called boinc_finish(0)

</stderr_txt>
]]>

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