Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
07:28:21 (887553): wrapper (7.7.26015): starting
07:28:21 (887553): wrapper: running run_atlas (--nthreads 12)
[2026-03-25 07:28:21] Arguments: --nthreads 12
[2026-03-25 07:28:21] Threads: 12
[2026-03-25 07:28:21] Checking for CVMFS
[2026-03-25 07:28:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 07:28:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 07:28:23] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 07:28:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 07:28:23] 2.12.7.0 2438426 4013 69456 157682 2 50 2163024 4194305 2751 130560 0 7317183 99.958 307860 2756 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-03-25 07:28:23] CVMFS is ok
[2026-03-25 07:28:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 07:28:23] Checking for apptainer binary...
[2026-03-25 07:28:23] apptainer is not installed, using version from CVMFS
[2026-03-25 07:28:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 07:28:23] Trebeth
[2026-03-25 07:28:23] apptainer works
[2026-03-25 07:28:23] Set ATHENA_PROC_NUMBER=12
[2026-03-25 07:28:23] Set ATHENA_CORE_NUMBER=12
[2026-03-25 07:28:23] Starting ATLAS job with PandaID=7056908530
[2026-03-25 07:28:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 10:07:58]  *** The last 200 lines of the pilot log: ***
[2026-03-25 10:07:58] 2026-03-25 14:07:17,233 | INFO     | job 7056908530 has finished - writing final server update
[2026-03-25 10:07:58] 2026-03-25 14:07:17,234 | INFO     | total number of processed events: 400 (read)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,243 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7056908530/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,244 | INFO     | extracted standard info from prmon json
[2026-03-25 10:07:58] 2026-03-25 14:07:17,244 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 10:07:58] 2026-03-25 14:07:17,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 10:07:58] 2026-03-25 14:07:17,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 10:07:58] 2026-03-25 14:07:17,245 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 10:07:58] 2026-03-25 14:07:17,248 | INFO     | fitting pss+swap vs Time
[2026-03-25 10:07:58] 2026-03-25 14:07:17,248 | INFO     | sum of square deviations: 1177156955.0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,249 | INFO     | sum of deviations: 11386318437.999996
[2026-03-25 10:07:58] 2026-03-25 14:07:17,249 | INFO     | mean x: 1774442869.5
[2026-03-25 10:07:58] 2026-03-25 14:07:17,249 | INFO     | mean y: 2708257.653846154
[2026-03-25 10:07:58] 2026-03-25 14:07:17,249 | INFO     | intersect: -17160994064.57851
[2026-03-25 10:07:58] 2026-03-25 14:07:17,250 | INFO     | chi2: 1.9337817413742113
[2026-03-25 10:07:58] 2026-03-25 14:07:17,250 | INFO     | sum of square deviations: 1067554900.0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,251 | INFO     | sum of deviations: 11413771793.00001
[2026-03-25 10:07:58] 2026-03-25 14:07:17,251 | INFO     | mean x: 1774442717.0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,251 | INFO     | mean y: 2708295.8476821193
[2026-03-25 10:07:58] 2026-03-25 14:07:17,251 | INFO     | intersect: -18968760273.67403
[2026-03-25 10:07:58] 2026-03-25 14:07:17,251 | INFO     | chi2: 1.9361467009071194
[2026-03-25 10:07:58] 2026-03-25 14:07:17,252 | INFO     | current chi2=1.9361467009071194 (change=-0.12229712807337967 %)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,252 | INFO     | right removable region: 150
[2026-03-25 10:07:58] 2026-03-25 14:07:17,252 | INFO     | sum of square deviations: 1067554900.0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,253 | INFO     | sum of deviations: -21249709778.000004
[2026-03-25 10:07:58] 2026-03-25 14:07:17,253 | INFO     | mean x: 1774443022.0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,253 | INFO     | mean y: 2753215.3973509935
[2026-03-25 10:07:58] 2026-03-25 14:07:17,253 | INFO     | intersect: 35323090591.11196
[2026-03-25 10:07:58] 2026-03-25 14:07:17,253 | INFO     | chi2: 0.08935098451546104
[2026-03-25 10:07:58] 2026-03-25 14:07:17,254 | INFO     | current chi2=0.08935098451546104 (change=95.37946901639658 %)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,254 | INFO     | sum of square deviations: 964976232.5
[2026-03-25 10:07:58] 2026-03-25 14:07:17,255 | INFO     | sum of deviations: -22749037684.000004
[2026-03-25 10:07:58] 2026-03-25 14:07:17,255 | INFO     | mean x: 1774443174.5
[2026-03-25 10:07:58] 2026-03-25 14:07:17,255 | INFO     | mean y: 2755355.0684931506
[2026-03-25 10:07:58] 2026-03-25 14:07:17,255 | INFO     | intersect: 41834743838.595314
[2026-03-25 10:07:58] 2026-03-25 14:07:17,255 | INFO     | chi2: 0.05183410040013742
[2026-03-25 10:07:58] 2026-03-25 14:07:17,255 | INFO     | current chi2=0.05183410040013742 (change=41.988215707720386 %)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,256 | INFO     | sum of square deviations: 869188390.0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,256 | INFO     | sum of deviations: -20713868881.000015
[2026-03-25 10:07:58] 2026-03-25 14:07:17,257 | INFO     | mean x: 1774443327.0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,257 | INFO     | mean y: 2752105.9219858157
[2026-03-25 10:07:58] 2026-03-25 14:07:17,257 | INFO     | intersect: 42290001723.0544
[2026-03-25 10:07:58] 2026-03-25 14:07:17,257 | INFO     | chi2: 0.05164738243400357
[2026-03-25 10:07:58] 2026-03-25 14:07:17,257 | INFO     | current chi2=0.05164738243400357 (change=0.3602222565694502 %)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,257 | INFO     | left removable region: 30
[2026-03-25 10:07:58] 2026-03-25 14:07:17,258 | INFO     | sum of square deviations: 535786790.0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,258 | INFO     | sum of deviations: -11950226258.499998
[2026-03-25 10:07:58] 2026-03-25 14:07:17,258 | INFO     | mean x: 1774443601.5
[2026-03-25 10:07:58] 2026-03-25 14:07:17,258 | INFO     | mean y: 2738683.841666667
[2026-03-25 10:07:58] 2026-03-25 14:07:17,259 | INFO     | intersect: 39580053609.5654
[2026-03-25 10:07:58] 2026-03-25 14:07:17,259 | INFO     | chi2: 0.046147632176900204
[2026-03-25 10:07:58] 2026-03-25 14:07:17,259 | INFO     | current memory leak: -22.30 B/s (using 120 data points, chi2=0.05)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,259 | INFO     | could have reported an average CPU frequency of 2931 MHz (9 samples)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,260 | INFO     | ..............................
[2026-03-25 10:07:58] 2026-03-25 14:07:17,260 | INFO     | . Timing measurements:
[2026-03-25 10:07:58] 2026-03-25 14:07:17,260 | INFO     | . get job = 0 s
[2026-03-25 10:07:58] 2026-03-25 14:07:17,260 | INFO     | . initial setup = 7 s
[2026-03-25 10:07:58] 2026-03-25 14:07:17,260 | INFO     | . payload setup = 7 s
[2026-03-25 10:07:58] 2026-03-25 14:07:17,260 | INFO     | . stage-in = 0 s
[2026-03-25 10:07:58] 2026-03-25 14:07:17,260 | INFO     | . payload execution = 9491 s
[2026-03-25 10:07:58] 2026-03-25 14:07:17,260 | INFO     | . stage-out = 0 s
[2026-03-25 10:07:58] 2026-03-25 14:07:17,260 | INFO     | . log creation = 0 s
[2026-03-25 10:07:58] 2026-03-25 14:07:17,260 | INFO     | ..............................
[2026-03-25 10:07:58] 2026-03-25 14:07:17,355 | INFO     | 
[2026-03-25 10:07:58] 2026-03-25 14:07:17,355 | INFO     | job summary report
[2026-03-25 10:07:58] 2026-03-25 14:07:17,355 | INFO     | --------------------------------------------------
[2026-03-25 10:07:58] 2026-03-25 14:07:17,355 | INFO     | PanDA job id: 7056908530
[2026-03-25 10:07:58] 2026-03-25 14:07:17,355 | INFO     | task id: 49176310
[2026-03-25 10:07:58] 2026-03-25 14:07:17,355 | INFO     | errors: (none)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,355 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | pilot state: finished 
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | transexitcode: 0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | exeerrorcode: 0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | exeerrordiag: 
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | exitcode: 0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | exitmsg: OK
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | cpuconsumptiontime: 107523 s
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | nevents: 400
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | neventsw: 0
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | pid: 896863
[2026-03-25 10:07:58] 2026-03-25 14:07:17,356 | INFO     | pgrp: 896863
[2026-03-25 10:07:58] 2026-03-25 14:07:17,357 | INFO     | corecount: 12
[2026-03-25 10:07:58] 2026-03-25 14:07:17,357 | INFO     | event service: False
[2026-03-25 10:07:58] 2026-03-25 14:07:17,357 | INFO     | sizes: {0: 2279897, 1: 2280358, 11: 2280358, 9503: 2308866, 9505: 2317878, 9506: 2317934, 9508: 2318320}
[2026-03-25 10:07:58] 2026-03-25 14:07:17,357 | INFO     | --------------------------------------------------
[2026-03-25 10:07:58] 2026-03-25 14:07:17,357 | INFO     | 
[2026-03-25 10:07:58] 2026-03-25 14:07:17,357 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-25 10:07:58] 2026-03-25 14:07:17,377 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,377 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,377 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,379 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,379 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 10:07:58] 2026-03-25 14:07:17,379 | INFO     | job 7056908530 has completed (purged errors)
[2026-03-25 10:07:58] 2026-03-25 14:07:17,379 | INFO     | overall cleanup function is called
[2026-03-25 10:07:58] 2026-03-25 14:07:18,384 | INFO     | --- collectZombieJob: --- 10, [896863]
[2026-03-25 10:07:58] 2026-03-25 14:07:18,384 | INFO     | zombie collector waiting for pid 896863
[2026-03-25 10:07:58] 2026-03-25 14:07:18,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 10:07:58] 2026-03-25 14:07:18,384 | INFO     | collected zombie processes
[2026-03-25 10:07:58] 2026-03-25 14:07:18,384 | INFO     | will attempt to kill all subprocesses of pid=896863
[2026-03-25 10:07:58] 2026-03-25 14:07:18,650 | INFO     | process IDs to be killed: [896863] (in reverse order)
[2026-03-25 10:07:58] 2026-03-25 14:07:18,725 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 10:07:58] 2026-03-25 14:07:18,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 10:07:58] 2026-03-25 14:07:18,732 | INFO     | did not find any defunct processes belonging to 896863
[2026-03-25 10:07:58] 2026-03-25 14:07:18,737 | INFO     | did not find any defunct processes belonging to 896863
[2026-03-25 10:07:58] 2026-03-25 14:07:18,737 | INFO     | ready for new job
[2026-03-25 10:07:58] 2026-03-25 14:07:18,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 10:07:58] 2026-03-25 14:07:18,740 | INFO     | **************************************
[2026-03-25 10:07:58] 2026-03-25 14:07:18,740 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 10:07:58] 2026-03-25 14:07:18,740 | INFO     | **************************************
[2026-03-25 10:07:58] 2026-03-25 14:07:18,740 | INFO     | 
[2026-03-25 10:07:58] 2026-03-25 14:07:18,743 | INFO     | architecture information:
[2026-03-25 10:07:58] 2026-03-25 14:07:18,743 | INFO     | executing command: cat /etc/os-release
[2026-03-25 10:07:58] 2026-03-25 14:07:18,757 | INFO     | cat /etc/os-release:
[2026-03-25 10:07:58] NAME="CentOS Linux"
[2026-03-25 10:07:58] VERSION="7 (Core)"
[2026-03-25 10:07:58] ID="centos"
[2026-03-25 10:07:58] ID_LIKE="rhel fedora"
[2026-03-25 10:07:58] VERSION_ID="7"
[2026-03-25 10:07:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 10:07:58] ANSI_COLOR="0;31"
[2026-03-25 10:07:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 10:07:58] HOME_URL="https://www.centos.org/"
[2026-03-25 10:07:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 10:07:58] 
[2026-03-25 10:07:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 10:07:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 10:07:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 10:07:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 10:07:58] 
[2026-03-25 10:07:58] 2026-03-25 14:07:18,757 | INFO     | **************************************
[2026-03-25 10:07:58] 2026-03-25 14:07:19,260 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-25 10:07:58] 2026-03-25 14:07:19,278 | INFO     | sufficient remaining disk space (399628042240 B)
[2026-03-25 10:07:58] 2026-03-25 14:07:19,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 10:07:58] 2026-03-25 14:07:19,279 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 10:07:58] 2026-03-25 14:07:19,279 | INFO     | update_server=False
[2026-03-25 10:07:58] 2026-03-25 14:07:19,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 10:07:58] 2026-03-25 14:07:19,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 10:07:58] 2026-03-25 14:07:19,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 10:07:58] 2026-03-25 14:07:19,444 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 10:07:58] 2026-03-25 14:07:19,444 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 10:07:58] 2026-03-25 14:07:19,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 10:07:58] 2026-03-25 14:07:19,444 | INFO     | will abort loop
[2026-03-25 10:07:58] 2026-03-25 14:07:19,647 | INFO     | all payload control threads have been joined
[2026-03-25 10:07:58] 2026-03-25 14:07:19,681 | INFO     | all data control threads have been joined
[2026-03-25 10:07:58] 2026-03-25 14:07:20,127 | INFO     | all job control threads have been joined
[2026-03-25 10:07:58] 2026-03-25 14:07:20,285 | INFO     | [job] retrieve thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:20,285 | INFO     | [job] queue monitor thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:20,434 | INFO     | [payload] validate_post thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:20,449 | INFO     | [job] job monitor thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:20,507 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:20,648 | INFO     | [payload] control thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:20,687 | INFO     | [data] control thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:20,934 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:20,991 | INFO     | [job] validate thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:21,026 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:21,133 | INFO     | [job] control thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:21,169 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:21,285 | INFO     | [data] copytool_out thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:21,387 | INFO     | [payload] failed_post thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:21,714 | INFO     | [data] copytool_in thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:21,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 10:07:58] 2026-03-25 14:07:25,725 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 10:07:58] 2026-03-25 14:07:48,870 | INFO     | PID=891919 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-25 10:07:58] 2026-03-25 14:07:48,870 | INFO     | .. there are 4 such processes running
[2026-03-25 10:07:58] 2026-03-25 14:07:48,870 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 10:07:58] 2026-03-25 14:07:48,870 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 10:07:58] 2026-03-25 14:07:48,870 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 10:07:58] 2026-03-25 14:07:52,298 | INFO     | [monitor] cgroup control has ended
[2026-03-25 10:07:58] 2026-03-25 14:07:53,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131393485190976)>', '<ExcThread(monitor, started 131392939730688)>']
[2026-03-25 10:07:58] 2026-03-25 14:07:53,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 10:07:58] 2026-03-25 14:07:53,887 | INFO     | [monitor] control thread has ended
[2026-03-25 10:07:58] 2026-03-25 14:07:58,607 | INFO     | all workflow threads have been joined
[2026-03-25 10:07:58] 2026-03-25 14:07:58,607 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 10:07:58] 2026-03-25 14:07:58,607 | INFO     | traces error code: 0
[2026-03-25 10:07:58] 2026-03-25 14:07:58,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 10:07:58] 2026-03-25 14:07:58,704 [wrapper] ==== pilot stdout END ====
[2026-03-25 10:07:58] 2026-03-25 14:07:58,706 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 10:07:58] 2026-03-25 14:07:58,709 [wrapper] pilotpid: 891919
[2026-03-25 10:07:58] 2026-03-25 14:07:58,711 [wrapper] Pilot exit status: 0
[2026-03-25 10:07:58] 2026-03-25 14:07:58,719 [wrapper] pandaids: 7056908530
[2026-03-25 10:07:58] 2026-03-25 14:07:58,764 [wrapper] cleanup supervisor_pilot  991807 891920
[2026-03-25 10:07:58] 2026-03-25 14:07:58,767 [wrapper] Test setup, not cleaning
[2026-03-25 10:07:58] 2026-03-25 14:07:58,769 [wrapper] apfmon messages muted
[2026-03-25 10:07:58] 2026-03-25 14:07:58,772 [wrapper] ==== wrapper stdout END ====
[2026-03-25 10:07:58] 2026-03-25 14:07:58,774 [wrapper] ==== wrapper stderr END ====
[2026-03-25 10:07:58]  *** Error codes and diagnostics ***
[2026-03-25 10:07:58]     "exeErrorCode": 0,
[2026-03-25 10:07:58]     "exeErrorDiag": "",
[2026-03-25 10:07:58]     "pilotErrorCode": 0,
[2026-03-25 10:07:58]     "pilotErrorDiag": "",
[2026-03-25 10:07:58]  *** Listing of results directory ***
[2026-03-25 10:07:58] total 482844
[2026-03-25 10:07:58] -rwx------ 1 boinc boinc     36322 Mar 16 09:16 runpilot2-wrapper.sh
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc    585013 Mar 16 09:19 pilot3.tar.gz
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc      5111 Mar 16 09:25 queuedata.json
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc       100 Mar 25 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 10:07:58] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 07:28 run_atlas
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc       105 Mar 25 07:28 job.xml
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc      7688 Mar 25 07:28 init_data.xml
[2026-03-25 10:07:58] -rw-r--r-- 2 boinc boinc 243941539 Mar 25 07:28 EVNT.49133438._000006.pool.root.1
[2026-03-25 10:07:58] -rw-r--r-- 2 boinc boinc     15845 Mar 25 07:28 start_atlas.sh
[2026-03-25 10:07:58] drwxrwx--x 2 boinc boinc      4096 Mar 25 07:28 shared
[2026-03-25 10:07:58] -rw-r--r-- 2 boinc boinc    597549 Mar 25 07:28 input.tar.gz
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc         0 Mar 25 07:28 boinc_lockfile
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc      2630 Mar 25 07:28 pandaJob.out
[2026-03-25 10:07:58] -rw------- 1 boinc boinc        50 Mar 25 07:28 setup.sh.local
[2026-03-25 10:07:58] -rw------- 1 boinc boinc   1011166 Mar 25 07:28 agis_schedconf.cvmfs.json
[2026-03-25 10:07:58] -rw------- 1 boinc boinc   1511579 Mar 25 07:28 agis_ddmendpoints.agis.ALL.json
[2026-03-25 10:07:58] -rw------- 1 boinc boinc       430 Mar 25 07:28 workernode_map.json
[2026-03-25 10:07:58] drwx------ 5 boinc boinc      4096 Mar 25 07:28 pilot3
[2026-03-25 10:07:58] -rw------- 1 boinc boinc 242889211 Mar 25 10:06 HITS.49176310._000137.pool.root.1
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc       530 Mar 25 10:07 boinc_task_state.xml
[2026-03-25 10:07:58] -rw------- 1 boinc boinc      1032 Mar 25 10:07 memory_monitor_summary.json
[2026-03-25 10:07:58] -rw------- 1 boinc boinc        95 Mar 25 10:07 pilot_heartbeat.json
[2026-03-25 10:07:58] -rw------- 1 boinc boinc    458833 Mar 25 10:07 log.49176310._000137.job.log.tgz.1
[2026-03-25 10:07:58] -rw------- 1 boinc boinc      6338 Mar 25 10:07 heartbeat.json
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc      8192 Mar 25 10:07 boinc_mmap_file
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc        28 Mar 25 10:07 wrapper_checkpoint.txt
[2026-03-25 10:07:58] -rw------- 1 boinc boinc      5012 Mar 25 10:07 pilotlog.txt
[2026-03-25 10:07:58] -rw------- 1 boinc boinc   1367888 Mar 25 10:07 log.49176310._000137.job.log.1
[2026-03-25 10:07:58] -rw------- 1 boinc boinc       357 Mar 25 10:07 output.list
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc       620 Mar 25 10:07 runtime_log
[2026-03-25 10:07:58] -rw------- 1 boinc boinc   1843200 Mar 25 10:07 result.tar.gz
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc      9403 Mar 25 10:07 runtime_log.err
[2026-03-25 10:07:58] -rw------- 1 boinc boinc       651 Mar 25 10:07 8BHNDmMzMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqowLDmX676ym.diag
[2026-03-25 10:07:58] -rw-r--r-- 1 boinc boinc     20798 Mar 25 10:07 stderr.txt
[2026-03-25 10:07:58] HITS file was successfully produced:
[2026-03-25 10:07:58] -rw------- 1 boinc boinc 242889211 Mar 25 10:06 shared/HITS.pool.root.1
[2026-03-25 10:07:58]  *** Contents of shared directory: ***
[2026-03-25 10:07:58] total 477836
[2026-03-25 10:07:58] -rw-r--r-- 2 boinc boinc 243941539 Mar 25 07:28 ATLAS.root_0
[2026-03-25 10:07:58] -rw-r--r-- 2 boinc boinc     15845 Mar 25 07:28 start_atlas.sh
[2026-03-25 10:07:58] -rw-r--r-- 2 boinc boinc    597549 Mar 25 07:28 input.tar.gz
[2026-03-25 10:07:58] -rw------- 1 boinc boinc 242889211 Mar 25 10:06 HITS.pool.root.1
[2026-03-25 10:07:58] -rw------- 1 boinc boinc   1843200 Mar 25 10:07 result.tar.gz
10:08:00 (887553): run_atlas exited; CPU time 107790.847145
10:08:00 (887553): called boinc_finish(0)

</stderr_txt>
]]>

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