Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:36:09 (433247): wrapper (7.7.26015): starting
16:36:09 (433247): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 16:36:09] Arguments: --nthreads 8
[2026-03-24 16:36:09] Threads: 8
[2026-03-24 16:36:09] Checking for CVMFS
[2026-03-24 16:36:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 16:36:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 16:36:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 16:36:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 16:36:11] 2.13.3.0 6683 121036 338384 157657 2 345 29229999 40960000 16217 16776704 0 249514783 99.587 269139704 34415 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-24 16:36:11] CVMFS is ok
[2026-03-24 16:36:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 16:36:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 16:36:11] Further information can be found at the LHC@home message board.
[2026-03-24 16:36:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 16:36:11] Checking for apptainer binary...
[2026-03-24 16:36:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 16:36:11] Running /usr/bin/apptainer --version
[2026-03-24 16:36:12] apptainer version 1.4.5-2.el9
[2026-03-24 16:36:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 16:36:12] c-211-35-3.aglt2.org
[2026-03-24 16:36:12] apptainer works
[2026-03-24 16:36:12] Set ATHENA_PROC_NUMBER=8
[2026-03-24 16:36:12] Set ATHENA_CORE_NUMBER=8
[2026-03-24 16:36:12] Starting ATLAS job with PandaID=7056896066
[2026-03-24 16:36:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 05:41:28]  *** The last 200 lines of the pilot log: ***
[2026-03-25 05:41:28] 2026-03-25 09:40:18,106 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7056896066/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 05:41:28] 2026-03-25 09:40:18,108 | INFO     | extracted standard info from prmon json
[2026-03-25 05:41:28] 2026-03-25 09:40:18,108 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 05:41:28] 2026-03-25 09:40:18,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 05:41:28] 2026-03-25 09:40:18,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 05:41:28] 2026-03-25 09:40:18,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 05:41:28] 2026-03-25 09:40:18,224 | INFO     | fitting pss+swap vs Time
[2026-03-25 05:41:28] 2026-03-25 09:40:18,225 | INFO     | sum of square deviations: 140463404934.11322
[2026-03-25 05:41:28] 2026-03-25 09:40:18,251 | INFO     | sum of deviations: -64174373473.30449
[2026-03-25 05:41:28] 2026-03-25 09:40:18,265 | INFO     | mean x: 1774408179.6835938
[2026-03-25 05:41:28] 2026-03-25 09:40:18,265 | INFO     | mean y: 2524842.3567708335
[2026-03-25 05:41:28] 2026-03-25 09:40:18,265 | INFO     | intersect: 813209541.8378544
[2026-03-25 05:41:28] 2026-03-25 09:40:18,271 | INFO     | chi2: 4.006516426233858
[2026-03-25 05:41:28] 2026-03-25 09:40:18,272 | INFO     | sum of square deviations: 137737852648.9435
[2026-03-25 05:41:28] 2026-03-25 09:40:18,398 | INFO     | sum of deviations: 35228918959.52684
[2026-03-25 05:41:28] 2026-03-25 09:40:18,398 | INFO     | mean x: 1774408027.1847968
[2026-03-25 05:41:28] 2026-03-25 09:40:18,399 | INFO     | mean y: 2530382.528178244
[2026-03-25 05:41:28] 2026-03-25 09:40:18,399 | INFO     | intersect: -451306201.8866332
[2026-03-25 05:41:28] 2026-03-25 09:40:18,448 | INFO     | chi2: 2.6067417193889955
[2026-03-25 05:41:28] 2026-03-25 09:40:18,448 | INFO     | current chi2=2.6067417193889955 (change=34.93745084082075 %)
[2026-03-25 05:41:28] 2026-03-25 09:40:18,449 | INFO     | sum of square deviations: 135047789401.27164
[2026-03-25 05:41:28] 2026-03-25 09:40:18,553 | INFO     | sum of deviations: 35403096814.765175
[2026-03-25 05:41:28] 2026-03-25 09:40:18,553 | INFO     | mean x: 1774407874.6860158
[2026-03-25 05:41:28] 2026-03-25 09:40:18,553 | INFO     | mean y: 2530392.4023746704
[2026-03-25 05:41:28] 2026-03-25 09:40:18,553 | INFO     | intersect: -462634821.00021666
[2026-03-25 05:41:28] 2026-03-25 09:40:18,574 | INFO     | chi2: 2.6068958675064877
[2026-03-25 05:41:28] 2026-03-25 09:40:18,574 | INFO     | current chi2=2.6068958675064877 (change=-0.00591344038213307 %)
[2026-03-25 05:41:28] 2026-03-25 09:40:18,574 | INFO     | right removable region: 757
[2026-03-25 05:41:28] 2026-03-25 09:40:18,575 | INFO     | sum of square deviations: 137737813364.31207
[2026-03-25 05:41:28] 2026-03-25 09:40:18,633 | INFO     | sum of deviations: -245040820340.1835
[2026-03-25 05:41:28] 2026-03-25 09:40:18,633 | INFO     | mean x: 1774408332.1834862
[2026-03-25 05:41:28] 2026-03-25 09:40:18,633 | INFO     | mean y: 2534945.4298820444
[2026-03-25 05:41:28] 2026-03-25 09:40:18,633 | INFO     | intersect: 3159275006.248619
[2026-03-25 05:41:28] 2026-03-25 09:40:18,645 | INFO     | chi2: 1.717293484844786
[2026-03-25 05:41:28] 2026-03-25 09:40:18,645 | INFO     | current chi2=1.717293484844786 (change=57.13749047426098 %)
[2026-03-25 05:41:28] 2026-03-25 09:40:18,646 | INFO     | sum of square deviations: 135047664411.6426
[2026-03-25 05:41:28] 2026-03-25 09:40:18,711 | INFO     | sum of deviations: -276986184854.88257
[2026-03-25 05:41:28] 2026-03-25 09:40:18,711 | INFO     | mean x: 1774408484.6846967
[2026-03-25 05:41:28] 2026-03-25 09:40:18,711 | INFO     | mean y: 2536753.9670184697
[2026-03-25 05:41:28] 2026-03-25 09:40:18,711 | INFO     | intersect: 3641893559.493349
[2026-03-25 05:41:28] 2026-03-25 09:40:18,720 | INFO     | chi2: 1.6358222510331601
[2026-03-25 05:41:28] 2026-03-25 09:40:18,720 | INFO     | current chi2=1.6358222510331601 (change=4.744164846056556 %)
[2026-03-25 05:41:28] 2026-03-25 09:40:18,720 | INFO     | left removable region: 20
[2026-03-25 05:41:28] 2026-03-25 09:40:18,721 | INFO     | sum of square deviations: 124131700406.90373
[2026-03-25 05:41:28] 2026-03-25 09:40:18,766 | INFO     | sum of deviations: -168982987764.73013
[2026-03-25 05:41:28] 2026-03-25 09:40:18,767 | INFO     | mean x: 1774408454.184532
[2026-03-25 05:41:28] 2026-03-25 09:40:18,767 | INFO     | mean y: 2542158.6377204885
[2026-03-25 05:41:28] 2026-03-25 09:40:18,767 | INFO     | intersect: 2418080180.91734
[2026-03-25 05:41:28] 2026-03-25 09:40:18,768 | INFO     | chi2: 0.2187787629744619
[2026-03-25 05:41:28] 2026-03-25 09:40:18,768 | INFO     | current memory leak: -1.36 B/s (using 737 data points, chi2=0.22)
[2026-03-25 05:41:28] 2026-03-25 09:40:18,781 | INFO     | could have reported an average CPU frequency of 2656 MHz (29 samples)
[2026-03-25 05:41:28] 2026-03-25 09:40:18,790 | INFO     | ..............................
[2026-03-25 05:41:28] 2026-03-25 09:40:18,790 | INFO     | . Timing measurements:
[2026-03-25 05:41:28] 2026-03-25 09:40:18,790 | INFO     | . get job = 0 s
[2026-03-25 05:41:28] 2026-03-25 09:40:18,790 | INFO     | . initial setup = 34 s
[2026-03-25 05:41:28] 2026-03-25 09:40:18,790 | INFO     | . payload setup = 64 s
[2026-03-25 05:41:28] 2026-03-25 09:40:18,790 | INFO     | . stage-in = 0 s
[2026-03-25 05:41:28] 2026-03-25 09:40:18,790 | INFO     | . payload execution = 46848 s
[2026-03-25 05:41:28] 2026-03-25 09:40:18,790 | INFO     | . stage-out = 5 s
[2026-03-25 05:41:28] 2026-03-25 09:40:18,790 | INFO     | . log creation = 0 s
[2026-03-25 05:41:28] 2026-03-25 09:40:18,790 | INFO     | ..............................
[2026-03-25 05:41:28] 2026-03-25 09:40:19,320 | INFO     | time since job start (46946s) is within the limit (345600.0s)
[2026-03-25 05:41:28] 2026-03-25 09:40:19,320 | INFO     | 
[2026-03-25 05:41:28] 2026-03-25 09:40:19,320 | INFO     | job summary report
[2026-03-25 05:41:28] 2026-03-25 09:40:19,320 | INFO     | --------------------------------------------------
[2026-03-25 05:41:28] 2026-03-25 09:40:19,320 | INFO     | PanDA job id: 7056896066
[2026-03-25 05:41:28] 2026-03-25 09:40:19,320 | INFO     | task id: 49176258
[2026-03-25 05:41:28] 2026-03-25 09:40:19,320 | INFO     | errors: (none)
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | pilot state: finished 
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | transexitcode: 0
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | exeerrorcode: 0
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | exeerrordiag: 
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | exitcode: 0
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | exitmsg: OK
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | cpuconsumptiontime: 98271 s
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | nevents: 400
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | neventsw: 0
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | pid: 445913
[2026-03-25 05:41:28] 2026-03-25 09:40:19,321 | INFO     | pgrp: 445913
[2026-03-25 05:41:28] 2026-03-25 09:40:19,322 | INFO     | corecount: 8
[2026-03-25 05:41:28] 2026-03-25 09:40:19,322 | INFO     | event service: False
[2026-03-25 05:41:28] 2026-03-25 09:40:19,322 | INFO     | sizes: {0: 2279788, 1: 2279844, 2: 2279900, 3: 2280273, 4: 2280389, 15: 2280389, 46918: 2325649, 46924: 2334647, 46925: 2334703, 46930: 2334897}
[2026-03-25 05:41:28] 2026-03-25 09:40:19,322 | INFO     | --------------------------------------------------
[2026-03-25 05:41:28] 2026-03-25 09:40:19,322 | INFO     | 
[2026-03-25 05:41:28] 2026-03-25 09:40:19,322 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-25 05:41:28] 2026-03-25 09:40:19,457 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,457 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,457 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,457 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 05:41:28] 2026-03-25 09:40:19,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,459 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 05:41:28] 2026-03-25 09:40:19,459 | INFO     | job 7056896066 has completed (purged errors)
[2026-03-25 05:41:28] 2026-03-25 09:40:19,459 | INFO     | overall cleanup function is called
[2026-03-25 05:41:28] 2026-03-25 09:40:20,495 | INFO     | --- collectZombieJob: --- 10, [445913]
[2026-03-25 05:41:28] 2026-03-25 09:40:20,496 | INFO     | zombie collector waiting for pid 445913
[2026-03-25 05:41:28] 2026-03-25 09:40:20,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 05:41:28] 2026-03-25 09:40:20,496 | INFO     | collected zombie processes
[2026-03-25 05:41:28] 2026-03-25 09:40:20,496 | INFO     | will attempt to kill all subprocesses of pid=445913
[2026-03-25 05:41:28] 2026-03-25 09:40:23,528 | INFO     | process IDs to be killed: [445913] (in reverse order)
[2026-03-25 05:41:28] 2026-03-25 09:40:24,003 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 05:41:28] 2026-03-25 09:40:24,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 05:41:28] 2026-03-25 09:40:24,040 | INFO     | did not find any defunct processes belonging to 445913
[2026-03-25 05:41:28] 2026-03-25 09:40:24,132 | INFO     | did not find any defunct processes belonging to 445913
[2026-03-25 05:41:28] 2026-03-25 09:40:24,132 | INFO     | ready for new job
[2026-03-25 05:41:28] 2026-03-25 09:40:24,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 05:41:28] 2026-03-25 09:40:24,155 | INFO     | **************************************
[2026-03-25 05:41:28] 2026-03-25 09:40:24,155 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 05:41:28] 2026-03-25 09:40:24,156 | INFO     | **************************************
[2026-03-25 05:41:28] 2026-03-25 09:40:24,156 | INFO     | 
[2026-03-25 05:41:28] 2026-03-25 09:40:24,187 | INFO     | architecture information:
[2026-03-25 05:41:28] 2026-03-25 09:40:24,207 | INFO     | executing command: cat /etc/os-release
[2026-03-25 05:41:28] 2026-03-25 09:40:24,345 | INFO     | cat /etc/os-release:
[2026-03-25 05:41:28] NAME="CentOS Linux"
[2026-03-25 05:41:28] VERSION="7 (Core)"
[2026-03-25 05:41:28] ID="centos"
[2026-03-25 05:41:28] ID_LIKE="rhel fedora"
[2026-03-25 05:41:28] VERSION_ID="7"
[2026-03-25 05:41:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 05:41:28] ANSI_COLOR="0;31"
[2026-03-25 05:41:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 05:41:28] HOME_URL="https://www.centos.org/"
[2026-03-25 05:41:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 05:41:28] 
[2026-03-25 05:41:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 05:41:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 05:41:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 05:41:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 05:41:28] 
[2026-03-25 05:41:28] 2026-03-25 09:40:24,345 | INFO     | **************************************
[2026-03-25 05:41:28] 2026-03-25 09:40:24,849 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-25 05:41:28] 2026-03-25 09:40:24,923 | INFO     | sufficient remaining disk space (121052856320 B)
[2026-03-25 05:41:28] 2026-03-25 09:40:24,923 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 05:41:28] 2026-03-25 09:40:24,923 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 05:41:28] 2026-03-25 09:40:24,923 | INFO     | update_server=False
[2026-03-25 05:41:28] 2026-03-25 09:40:24,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 05:41:28] 2026-03-25 09:40:24,924 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 05:41:28] 2026-03-25 09:40:24,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 05:41:28] 2026-03-25 09:40:25,163 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 05:41:28] 2026-03-25 09:40:25,164 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 05:41:28] 2026-03-25 09:40:25,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 05:41:28] 2026-03-25 09:40:25,164 | INFO     | will abort loop
[2026-03-25 05:41:28] 2026-03-25 09:40:25,718 | INFO     | all job control threads have been joined
[2026-03-25 05:41:28] 2026-03-25 09:40:25,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 05:41:28] 2026-03-25 09:40:25,930 | INFO     | [job] retrieve thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:25,930 | INFO     | [job] queue monitor thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:25,964 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:26,019 | INFO     | all data control threads have been joined
[2026-03-25 05:41:28] 2026-03-25 09:40:26,170 | INFO     | [job] job monitor thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:26,409 | INFO     | all payload control threads have been joined
[2026-03-25 05:41:28] 2026-03-25 09:40:26,664 | INFO     | [payload] validate_post thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:26,694 | INFO     | [payload] failed_post thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:26,698 | INFO     | [data] copytool_in thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:26,725 | INFO     | [job] control thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:26,932 | INFO     | [data] copytool_out thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:27,026 | INFO     | [data] control thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:27,198 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:27,201 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:27,205 | INFO     | [job] validate thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:27,209 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:27,418 | INFO     | [payload] control thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:29,759 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 05:41:28] 2026-03-25 09:40:51,430 | INFO     | 46982s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-25 05:41:28] 2026-03-25 09:41:01,504 | INFO     | PID=437731 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-25 05:41:28] 2026-03-25 09:41:01,504 | INFO     | .. there are 29 such processes running
[2026-03-25 05:41:28] 2026-03-25 09:41:01,505 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 05:41:28] 2026-03-25 09:41:01,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 05:41:28] 2026-03-25 09:41:01,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 05:41:28] 2026-03-25 09:41:20,141 | INFO     | [monitor] cgroup control has ended
[2026-03-25 05:41:28] 2026-03-25 09:41:20,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139807746066240)>', '<ExcThread(monitor, started 139807225280256)>']
[2026-03-25 05:41:28] 2026-03-25 09:41:20,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 05:41:28] 2026-03-25 09:41:20,711 | INFO     | [monitor] control thread has ended
[2026-03-25 05:41:28] 2026-03-25 09:41:25,671 | INFO     | all workflow threads have been joined
[2026-03-25 05:41:28] 2026-03-25 09:41:25,672 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 05:41:28] 2026-03-25 09:41:25,672 | INFO     | traces error code: 0
[2026-03-25 05:41:28] 2026-03-25 09:41:25,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 05:41:28] 2026-03-25 09:41:26,367 [wrapper] ==== pilot stdout END ====
[2026-03-25 05:41:28] 2026-03-25 09:41:26,392 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 05:41:28] 2026-03-25 09:41:26,462 [wrapper] pilotpid: 437731
[2026-03-25 05:41:28] 2026-03-25 09:41:26,498 [wrapper] Pilot exit status: 0
[2026-03-25 05:41:28] 2026-03-25 09:41:26,635 [wrapper] pandaids: 7056896066
[2026-03-25 05:41:28] 2026-03-25 09:41:26,738 [wrapper] cleanup supervisor_pilot 2334121 437732
[2026-03-25 05:41:28] 2026-03-25 09:41:26,821 [wrapper] Test setup, not cleaning
[2026-03-25 05:41:28] 2026-03-25 09:41:26,850 [wrapper] apfmon messages muted
[2026-03-25 05:41:28] 2026-03-25 09:41:26,942 [wrapper] ==== wrapper stdout END ====
[2026-03-25 05:41:28] 2026-03-25 09:41:26,975 [wrapper] ==== wrapper stderr END ====
[2026-03-25 05:41:28]  *** Error codes and diagnostics ***
[2026-03-25 05:41:28]     "exeErrorCode": 0,
[2026-03-25 05:41:28]     "exeErrorDiag": "",
[2026-03-25 05:41:28]     "pilotErrorCode": 0,
[2026-03-25 05:41:28]     "pilotErrorDiag": "",
[2026-03-25 05:41:28]  *** Listing of results directory ***
[2026-03-25 05:41:28] total 431868
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 08:24 pilot3.tar.gz
[2026-03-25 05:41:28] -rwx------. 1 boincer umatlas     36322 Mar 16 09:07 runpilot2-wrapper.sh
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 09:08 queuedata.json
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas       100 Mar 24 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 05:41:28] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 24 16:36 run_atlas
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas       105 Mar 24 16:36 job.xml
[2026-03-25 05:41:28] -rw-r--r--. 2 boincer umatlas 220774831 Mar 24 16:36 EVNT.49133225._000008.pool.root.1
[2026-03-25 05:41:28] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 16:36 start_atlas.sh
[2026-03-25 05:41:28] drwxrwx--x. 2 boincer umatlas      4096 Mar 24 16:36 shared
[2026-03-25 05:41:28] -rw-r--r--. 2 boincer umatlas    597539 Mar 24 16:36 input.tar.gz
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas         0 Mar 24 16:36 boinc_lockfile
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas      2596 Mar 24 16:36 pandaJob.out
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas        57 Mar 24 16:36 setup.sh.local
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas   1010852 Mar 24 16:37 agis_schedconf.cvmfs.json
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas       444 Mar 24 16:37 workernode_map.json
[2026-03-25 05:41:28] drwx------. 5 boincer umatlas      4096 Mar 24 16:37 pilot3
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas 204627672 Mar 25 05:38 HITS.49176258._000193.pool.root.1
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas       531 Mar 25 05:38 boinc_task_state.xml
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas      1059 Mar 25 05:40 memory_monitor_summary.json
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas        95 Mar 25 05:40 pilot_heartbeat.json
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas   1511579 Mar 25 05:40 agis_ddmendpoints.agis.ALL.json
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas    854550 Mar 25 05:40 log.49176258._000193.job.log.tgz.1
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas      6400 Mar 25 05:40 heartbeat.json
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas      6861 Mar 25 05:41 init_data.xml
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas      5122 Mar 25 05:41 pilotlog.txt
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas      8192 Mar 25 05:41 boinc_mmap_file
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas        29 Mar 25 05:41 wrapper_checkpoint.txt
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas   5587918 Mar 25 05:41 log.49176258._000193.job.log.1
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas       357 Mar 25 05:41 output.list
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas       620 Mar 25 05:41 runtime_log
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas   6461440 Mar 25 05:41 result.tar.gz
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas      9352 Mar 25 05:41 runtime_log.err
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas       661 Mar 25 05:41 90BLDmiqMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLEtLDmkAqtzm.diag
[2026-03-25 05:41:28] -rw-r--r--. 1 boincer umatlas     21215 Mar 25 05:41 stderr.txt
[2026-03-25 05:41:28] HITS file was successfully produced:
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas 204627672 Mar 25 05:38 shared/HITS.pool.root.1
[2026-03-25 05:41:28]  *** Contents of shared directory: ***
[2026-03-25 05:41:28] total 422352
[2026-03-25 05:41:28] -rw-r--r--. 2 boincer umatlas 220774831 Mar 24 16:36 ATLAS.root_0
[2026-03-25 05:41:28] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 16:36 start_atlas.sh
[2026-03-25 05:41:28] -rw-r--r--. 2 boincer umatlas    597539 Mar 24 16:36 input.tar.gz
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas 204627672 Mar 25 05:38 HITS.pool.root.1
[2026-03-25 05:41:28] -rw-------. 1 boincer umatlas   6461440 Mar 25 05:41 result.tar.gz
05:41:29 (433247): run_atlas exited; CPU time 100469.900499
05:41:29 (433247): called boinc_finish(0)

</stderr_txt>
]]>

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