Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:14:34 (18487): wrapper (7.7.26015): starting
16:14:34 (18487): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 16:14:34] Arguments: --nthreads 8
[2026-03-24 16:14:34] Threads: 8
[2026-03-24 16:14:34] Checking for CVMFS
[2026-03-24 16:14:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 16:14:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 16:14:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 16:14:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 16:14:34] 2.11.0.0 5805 29083 81836 157648 0 11 3485878 4096001 1834 130560 13 5501649 99.723 2225936 170 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 16:14:34] CVMFS is ok
[2026-03-24 16:14:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 16:14:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 16:14:34] Further information can be found at the LHC@home message board.
[2026-03-24 16:14:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 16:14:34] Checking for apptainer binary...
[2026-03-24 16:14:34] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 16:14:34] apptainer is not installed, using version from CVMFS
[2026-03-24 16:14:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 16:14:34] WARNING: Environment variable TMPDIR already has value [/tmp/job_11385078/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node052
[2026-03-24 16:14:34] apptainer works
[2026-03-24 16:14:34] Set ATHENA_PROC_NUMBER=8
[2026-03-24 16:14:34] Set ATHENA_CORE_NUMBER=8
[2026-03-24 16:14:34] Starting ATLAS job with PandaID=7056893997
[2026-03-24 16:14:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11385078/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 17:59:58]  *** The last 200 lines of the pilot log: ***
[2026-03-24 17:59:58] 2026-03-24 16:59:04,055 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 17:59:58] 2026-03-24 16:59:04,055 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 17:59:58] 2026-03-24 16:59:04,055 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 17:59:58] 2026-03-24 16:59:04,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 17:59:58] 2026-03-24 16:59:04,056 | INFO     | fitting pss+swap vs Time
[2026-03-24 17:59:58] 2026-03-24 16:59:04,056 | INFO     | sum of square deviations: 338804492.0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,056 | INFO     | sum of deviations: 1965449340.999999
[2026-03-24 17:59:58] 2026-03-24 16:59:04,056 | INFO     | mean x: 1774368410.0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,056 | INFO     | mean y: 2502332.359223301
[2026-03-24 17:59:58] 2026-03-24 16:59:04,057 | INFO     | intersect: -10290841777.510834
[2026-03-24 17:59:58] 2026-03-24 16:59:04,057 | INFO     | chi2: 1.8437946791652964
[2026-03-24 17:59:58] 2026-03-24 16:59:04,057 | INFO     | sum of square deviations: 291817564.5
[2026-03-24 17:59:58] 2026-03-24 16:59:04,057 | INFO     | sum of deviations: 8208813157.500002
[2026-03-24 17:59:58] 2026-03-24 16:59:04,057 | INFO     | mean x: 1774368257.5
[2026-03-24 17:59:58] 2026-03-24 16:59:04,057 | INFO     | mean y: 2521771.887755102
[2026-03-24 17:59:58] 2026-03-24 16:59:04,057 | INFO     | intersect: -49910366519.71593
[2026-03-24 17:59:58] 2026-03-24 16:59:04,057 | INFO     | chi2: 1.1624947580826328
[2026-03-24 17:59:58] 2026-03-24 16:59:04,057 | INFO     | current chi2=1.1624947580826328 (change=36.95096470237644 %)
[2026-03-24 17:59:58] 2026-03-24 16:59:04,057 | INFO     | sum of square deviations: 249388862.0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | sum of deviations: 7860049347.999998
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | mean x: 1774368105.0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | mean y: 2520517.129032258
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | intersect: -55920670097.60355
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | chi2: 1.1649094263105373
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | current chi2=1.1649094263105373 (change=-0.20771433256930363 %)
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | right removable region: 92
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | sum of square deviations: 291817564.5
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | sum of deviations: -9795982466.5
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | mean x: 1774368562.5
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | mean y: 2539468.3571428573
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | intersect: 59566066280.530266
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | chi2: 0.7142537274071704
[2026-03-24 17:59:58] 2026-03-24 16:59:04,058 | INFO     | current chi2=0.7142537274071704 (change=61.261753519620754 %)
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | sum of square deviations: 249388862.0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | sum of deviations: -8661271477.0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | mean x: 1774368715.0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | mean y: 2535370.6559139783
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | intersect: 61626334515.746216
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | chi2: 0.714981394706757
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | current chi2=0.714981394706757 (change=-0.10187798420431675 %)
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | left removable region: 20
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | sum of square deviations: 115715658.0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | sum of deviations: -850169688.0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | mean x: 1774368684.5
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | mean y: 2552005.138888889
[2026-03-24 17:59:58] 2026-03-24 16:59:04,059 | INFO     | intersect: 13038942213.440132
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | chi2: 0.0011581861136013383
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | current memory leak: -7.35 B/s (using 72 data points, chi2=0.00)
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | could have reported an average CPU frequency of 2617 MHz (7 samples)
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | ..............................
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | . Timing measurements:
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | . get job = 0 s
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | . initial setup = 2 s
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | . payload setup = 3 s
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | . stage-in = 0 s
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | . payload execution = 6239 s
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | . stage-out = 0 s
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | . log creation = 0 s
[2026-03-24 17:59:58] 2026-03-24 16:59:04,060 | INFO     | ..............................
[2026-03-24 17:59:58] 2026-03-24 16:59:04,107 | INFO     | 
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | job summary report
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | --------------------------------------------------
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | PanDA job id: 7056893997
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | task id: 49176241
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | errors: (none)
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | pilot state: finished 
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | transexitcode: 0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | exeerrorcode: 0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | exeerrordiag: 
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | exitcode: 0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | exitmsg: OK
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | cpuconsumptiontime: 46643 s
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | nevents: 400
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | neventsw: 0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | pid: 2895
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | pgrp: 2895
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | corecount: 8
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | event service: False
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | sizes: {0: 2280464, 11: 2280464, 6246: 2307614, 6247: 2316642, 6249: 2316698, 6251: 2316892}
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | --------------------------------------------------
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | 
[2026-03-24 17:59:58] 2026-03-24 16:59:04,108 | INFO     | executing command: ls -lF /tmp/job_11385078/atlas/pilot/slots/0
[2026-03-24 17:59:58] 2026-03-24 16:59:04,118 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | job 7056893997 has completed (purged errors)
[2026-03-24 17:59:58] 2026-03-24 16:59:04,119 | INFO     | overall cleanup function is called
[2026-03-24 17:59:58] 2026-03-24 16:59:04,854 | WARNING  | process 2895 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 17:59:58] 2026-03-24 16:59:04,937 | INFO     | using path: /tmp/job_11385078/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 17:59:58] 2026-03-24 16:59:05,035 | INFO     | number of running child processes to parent process 2895: 1
[2026-03-24 17:59:58] 2026-03-24 16:59:05,035 | INFO     | maximum number of monitored processes: 6
[2026-03-24 17:59:58] 2026-03-24 16:59:05,035 | INFO     | aborting job monitoring since job object (job id=7056893997) has expired
[2026-03-24 17:59:58] 2026-03-24 16:59:05,125 | INFO     | --- collectZombieJob: --- 10, [2895]
[2026-03-24 17:59:58] 2026-03-24 16:59:05,125 | INFO     | zombie collector waiting for pid 2895
[2026-03-24 17:59:58] 2026-03-24 16:59:05,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 17:59:58] 2026-03-24 16:59:05,126 | INFO     | collected zombie processes
[2026-03-24 17:59:58] 2026-03-24 16:59:05,126 | INFO     | will attempt to kill all subprocesses of pid=2895
[2026-03-24 17:59:58] 2026-03-24 16:59:05,228 | INFO     | process IDs to be killed: [2895] (in reverse order)
[2026-03-24 17:59:58] 2026-03-24 16:59:05,267 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 17:59:58] 2026-03-24 16:59:05,267 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 17:59:58] 2026-03-24 16:59:05,271 | INFO     | did not find any defunct processes belonging to 2895
[2026-03-24 17:59:58] 2026-03-24 16:59:05,274 | INFO     | did not find any defunct processes belonging to 2895
[2026-03-24 17:59:58] 2026-03-24 16:59:05,274 | INFO     | ready for new job
[2026-03-24 17:59:58] 2026-03-24 16:59:05,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 17:59:58] 2026-03-24 16:59:05,275 | INFO     | **************************************
[2026-03-24 17:59:58] 2026-03-24 16:59:05,275 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 17:59:58] 2026-03-24 16:59:05,275 | INFO     | **************************************
[2026-03-24 17:59:58] 2026-03-24 16:59:05,275 | INFO     | 
[2026-03-24 17:59:58] 2026-03-24 16:59:05,289 | INFO     | architecture information:
[2026-03-24 17:59:58] 2026-03-24 16:59:05,289 | INFO     | executing command: cat /etc/os-release
[2026-03-24 17:59:58] 2026-03-24 16:59:05,296 | INFO     | cat /etc/os-release:
[2026-03-24 17:59:58] NAME="CentOS Linux"
[2026-03-24 17:59:58] VERSION="7 (Core)"
[2026-03-24 17:59:58] ID="centos"
[2026-03-24 17:59:58] ID_LIKE="rhel fedora"
[2026-03-24 17:59:58] VERSION_ID="7"
[2026-03-24 17:59:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 17:59:58] ANSI_COLOR="0;31"
[2026-03-24 17:59:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 17:59:58] HOME_URL="https://www.centos.org/"
[2026-03-24 17:59:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 17:59:58] 
[2026-03-24 17:59:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 17:59:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 17:59:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 17:59:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 17:59:58] 
[2026-03-24 17:59:58] 2026-03-24 16:59:05,296 | INFO     | **************************************
[2026-03-24 17:59:58] 2026-03-24 16:59:05,798 | INFO     | executing command: df -mP /tmp/job_11385078/atlas/pilot/slots/0
[2026-03-24 17:59:58] 2026-03-24 16:59:05,806 | INFO     | sufficient remaining disk space (223859441664 B)
[2026-03-24 17:59:58] 2026-03-24 16:59:05,806 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 17:59:58] 2026-03-24 16:59:05,806 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 17:59:58] 2026-03-24 16:59:05,806 | INFO     | update_server=False
[2026-03-24 17:59:58] 2026-03-24 16:59:05,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 17:59:58] 2026-03-24 16:59:05,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 17:59:58] 2026-03-24 16:59:05,807 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 17:59:58] 2026-03-24 16:59:05,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 17:59:58] 2026-03-24 16:59:05,807 | INFO     | will abort loop
[2026-03-24 17:59:58] 2026-03-24 16:59:05,854 | INFO     | all payload control threads have been joined
[2026-03-24 17:59:58] 2026-03-24 16:59:06,538 | INFO     | all job control threads have been joined
[2026-03-24 17:59:58] 2026-03-24 16:59:06,759 | INFO     | all data control threads have been joined
[2026-03-24 17:59:58] 2026-03-24 16:59:06,811 | INFO     | [job] retrieve thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:06,812 | INFO     | [job] queue monitor thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:06,812 | INFO     | [job] job monitor thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:06,860 | INFO     | [payload] control thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:06,944 | INFO     | [payload] failed_post thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:07,009 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:07,089 | INFO     | [data] copytool_in thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:07,467 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:07,543 | INFO     | [job] control thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:07,548 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:07,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 17:59:58] 2026-03-24 16:59:07,764 | INFO     | [data] control thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:07,812 | INFO     | [data] copytool_out thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:07,977 | INFO     | [job] validate thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:08,016 | INFO     | [payload] validate_post thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:08,034 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:11,711 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 17:59:58] 2026-03-24 16:59:36,850 | INFO     | PID=24912 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-24 17:59:58] 2026-03-24 16:59:36,850 | INFO     | .. there are 5 such processes running
[2026-03-24 17:59:58] 2026-03-24 16:59:36,850 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 17:59:58] 2026-03-24 16:59:36,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 17:59:58] 2026-03-24 16:59:36,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 17:59:58] 2026-03-24 16:59:40,569 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-24 17:59:58] 2026-03-24 16:59:51,666 | INFO     | [monitor] cgroup control has ended
[2026-03-24 17:59:58] 2026-03-24 16:59:52,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-24 17:59:58] 2026-03-24 16:59:53,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 17:59:58] 2026-03-24 16:59:53,931 | INFO     | [monitor] control thread has ended
[2026-03-24 17:59:58] 2026-03-24 16:59:57,973 | INFO     | all workflow threads have been joined
[2026-03-24 17:59:58] 2026-03-24 16:59:57,973 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 17:59:58] 2026-03-24 16:59:57,973 | INFO     | traces error code: 0
[2026-03-24 17:59:58] 2026-03-24 16:59:57,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 17:59:58] 2026-03-24 16:59:58,027 [wrapper] ==== pilot stdout END ====
[2026-03-24 17:59:58] 2026-03-24 16:59:58,028 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 17:59:58] 2026-03-24 16:59:58,029 [wrapper] pilotpid: 24912
[2026-03-24 17:59:58] 2026-03-24 16:59:58,030 [wrapper] Pilot exit status: 0
[2026-03-24 17:59:58] 2026-03-24 16:59:58,034 [wrapper] pandaids: 7056893997
[2026-03-24 17:59:58] 2026-03-24 16:59:58,058 [wrapper] cleanup supervisor_pilot 30654 24913
[2026-03-24 17:59:58] 2026-03-24 16:59:58,059 [wrapper] Test setup, not cleaning
[2026-03-24 17:59:58] 2026-03-24 16:59:58,060 [wrapper] apfmon messages muted
[2026-03-24 17:59:58] 2026-03-24 16:59:58,061 [wrapper] ==== wrapper stdout END ====
[2026-03-24 17:59:58] 2026-03-24 16:59:58,062 [wrapper] ==== wrapper stderr END ====
[2026-03-24 17:59:58]  *** Error codes and diagnostics ***
[2026-03-24 17:59:58]     "exeErrorCode": 0,
[2026-03-24 17:59:58]     "exeErrorDiag": "",
[2026-03-24 17:59:58]     "pilotErrorCode": 0,
[2026-03-24 17:59:58]     "pilotErrorDiag": "",
[2026-03-24 17:59:58]  *** Listing of results directory ***
[2026-03-24 17:59:58] total 434956
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user    585013 Mar 16 13:24 pilot3.tar.gz
[2026-03-24 17:59:58] -rwx------ 1 mf493845 unix-user     36322 Mar 16 13:54 runpilot2-wrapper.sh
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user      5111 Mar 16 13:55 queuedata.json
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user       100 Mar 24 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 17:59:58] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 15:16 run_atlas
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user       105 Mar 24 15:16 job.xml
[2026-03-24 17:59:58] -rw-r--r-- 2 mf493845 unix-user 229718284 Mar 24 16:14 EVNT.49133151._000005.pool.root.1
[2026-03-24 17:59:58] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 16:14 start_atlas.sh
[2026-03-24 17:59:58] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 16:14 shared
[2026-03-24 17:59:58] -rw-r--r-- 2 mf493845 unix-user    597553 Mar 24 16:14 input.tar.gz
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user      6390 Mar 24 16:14 init_data.xml
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user         0 Mar 24 16:14 boinc_setup_complete
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user      8192 Mar 24 16:14 boinc_mmap_file
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user         0 Mar 24 16:14 boinc_lockfile
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user      2643 Mar 24 16:14 pandaJob.out
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user   1010852 Mar 24 16:14 agis_schedconf.cvmfs.json
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user   1511579 Mar 24 16:14 agis_ddmendpoints.agis.ALL.json
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user       419 Mar 24 16:14 workernode_map.json
[2026-03-24 17:59:58] drwx------ 5 mf493845 unix-user       440 Mar 24 16:14 pilot3
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user 209232861 Mar 24 17:58 HITS.49176241._000105.pool.root.1
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user      1019 Mar 24 17:58 memory_monitor_summary.json
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user    338641 Mar 24 17:59 log.49176241._000105.job.log.tgz.1
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user      6304 Mar 24 17:59 heartbeat.json
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user        95 Mar 24 17:59 pilot_heartbeat.json
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user      4833 Mar 24 17:59 pilotlog.txt
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user    926543 Mar 24 17:59 log.49176241._000105.job.log.1
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user       357 Mar 24 17:59 output.list
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user       620 Mar 24 17:59 runtime_log
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user   1280000 Mar 24 17:59 result.tar.gz
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user      9219 Mar 24 17:59 runtime_log.err
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user       646 Mar 24 17:59 437MDmsdMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmAtsLDmcxHxcn.diag
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user     21503 Mar 24 17:59 stderr.txt
[2026-03-24 17:59:58] HITS file was successfully produced:
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user 209232861 Mar 24 17:58 shared/HITS.pool.root.1
[2026-03-24 17:59:58]  *** Contents of shared directory: ***
[2026-03-24 17:59:58] total 430520
[2026-03-24 17:59:58] -rw-r--r-- 2 mf493845 unix-user 229718284 Mar 24 16:14 ATLAS.root_0
[2026-03-24 17:59:58] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 16:14 start_atlas.sh
[2026-03-24 17:59:58] -rw-r--r-- 2 mf493845 unix-user    597553 Mar 24 16:14 input.tar.gz
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user 209232861 Mar 24 17:58 HITS.pool.root.1
[2026-03-24 17:59:58] -rw------- 1 mf493845 unix-user   1280000 Mar 24 17:59 result.tar.gz
17:59:59 (18487): run_atlas exited; CPU time 46732.952032
17:59:59 (18487): called boinc_finish(0)

</stderr_txt>
]]>

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