Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:15:10 (1634): wrapper (7.7.26015): starting
14:15:10 (1634): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 14:15:10] Arguments: --nthreads 8
[2026-03-24 14:15:10] Threads: 8
[2026-03-24 14:15:10] Checking for CVMFS
[2026-03-24 14:15:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 14:15:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 14:15:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 14:15:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 14:15:11] 2.11.0.0 5736 29030 67204 157646 3 21 3766145 4096000 142 130560 0 1569898 99.018 2393326 270 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 14:15:11] CVMFS is ok
[2026-03-24 14:15:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 14:15:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 14:15:11] Further information can be found at the LHC@home message board.
[2026-03-24 14:15:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 14:15:11] Checking for apptainer binary...
[2026-03-24 14:15:11] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 14:15:11] apptainer is not installed, using version from CVMFS
[2026-03-24 14:15:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 14:15:11] WARNING: Environment variable TMPDIR already has value [/tmp/job_11384513/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node012
[2026-03-24 14:15:11] apptainer works
[2026-03-24 14:15:11] Set ATHENA_PROC_NUMBER=8
[2026-03-24 14:15:11] Set ATHENA_CORE_NUMBER=8
[2026-03-24 14:15:11] Starting ATLAS job with PandaID=7056971119
[2026-03-24 14:15:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11384513/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 15:43:49]  *** The last 200 lines of the pilot log: ***
[2026-03-24 15:43:49]  guid=cb09ef80-5c57-491f-afe7-fcae7fcc815c
[2026-03-24 15:43:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-24 15:43:49]  is_altstaged=None
[2026-03-24 15:43:49]  is_tar=False
[2026-03-24 15:43:49]  lfn=log.49180930._000028.job.log.tgz.1
[2026-03-24 15:43:49]  mtime=0
[2026-03-24 15:43:49]  protocol_id=None
[2026-03-24 15:43:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-24 15:43:49]  replicas=None
[2026-03-24 15:43:49]  scope=mc23_13p6TeV
[2026-03-24 15:43:49]  status=None
[2026-03-24 15:43:49]  status_code=0
[2026-03-24 15:43:49]  storage_token=
[2026-03-24 15:43:49]  surl=/tmp/job_11384513/atlas/pilot/slots/0/PanDA_Pilot-7056971119/log.49180930._000028.job.log.tgz.1
[2026-03-24 15:43:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/2b/log.49180930._000028.job.log.tgz.1
[2026-03-24 15:43:49]  workdir=None
[2026-03-24 15:43:49] ]
[2026-03-24 15:43:49] 2026-03-24 14:43:13,675 | INFO     | transferring file log.49180930._000028.job.log.tgz.1 from /tmp/job_11384513/atlas/pilot/slots/0/PanDA_Pilot-7056971119/log.49180930._000028.job.log.tgz.1 to /tmp/j
[2026-03-24 15:43:49] 2026-03-24 14:43:13,676 | INFO     | executing command: /usr/bin/env mv /tmp/job_11384513/atlas/pilot/slots/0/PanDA_Pilot-7056971119/log.49180930._000028.job.log.tgz.1 /tmp/job_11384513/atlas/pilot/sl
[2026-03-24 15:43:49] 2026-03-24 14:43:13,684 | INFO     | adding to output.list: log.49180930._000028.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/2b/log.49180930._000028.job.log.tg
[2026-03-24 15:43:49] 2026-03-24 14:43:13,684 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-24 15:43:49] 2026-03-24 14:43:13,684 | INFO     | summary of transferred files:
[2026-03-24 15:43:49] 2026-03-24 14:43:13,684 | INFO     |  -- lfn=log.49180930._000028.job.log.tgz.1, status_code=0, status=transferred
[2026-03-24 15:43:49] 2026-03-24 14:43:13,684 | INFO     | stage-out finished correctly
[2026-03-24 15:43:49] 2026-03-24 14:43:13,846 | INFO     | time since job start (5275s) is within the limit (345600.0s)
[2026-03-24 15:43:49] 2026-03-24 14:43:14,460 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-24 15:43:49] 2026-03-24 14:43:15,851 | INFO     | time since job start (5277s) is within the limit (345600.0s)
[2026-03-24 15:43:49] 2026-03-24 14:43:16,791 | WARNING  | process 16113 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 15:43:49] 2026-03-24 14:43:16,792 | INFO     | using path: /tmp/job_11384513/atlas/pilot/slots/0/PanDA_Pilot-7056971119/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 15:43:49] 2026-03-24 14:43:16,887 | INFO     | number of running child processes to parent process 16113: 1
[2026-03-24 15:43:49] 2026-03-24 14:43:16,887 | INFO     | maximum number of monitored processes: 6
[2026-03-24 15:43:49] 2026-03-24 14:43:16,960 | INFO     | job 7056971119 has state=finished
[2026-03-24 15:43:49] 2026-03-24 14:43:16,960 | INFO     | preparing for final server update for job 7056971119 in state='finished'
[2026-03-24 15:43:49] 2026-03-24 14:43:16,960 | INFO     | reading metadata from: /tmp/job_11384513/atlas/pilot/slots/0/PanDA_Pilot-7056971119/jobReport.json
[2026-03-24 15:43:49] 2026-03-24 14:43:16,961 | INFO     | added worker_node to metadata from /tmp/job_11384513/atlas/pilot/slots/0/workernode_map.json
[2026-03-24 15:43:49] 2026-03-24 14:43:16,961 | INFO     | this job has now completed (state=finished)
[2026-03-24 15:43:49] 2026-03-24 14:43:16,961 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 15:43:49] 2026-03-24 14:43:16,961 | INFO     | log transfer has been attempted: DONE
[2026-03-24 15:43:49] 2026-03-24 14:43:16,962 | INFO     | job 7056971119 has finished - writing final server update
[2026-03-24 15:43:49] 2026-03-24 14:43:16,962 | INFO     | total number of processed events: 400 (read)
[2026-03-24 15:43:49] 2026-03-24 14:43:16,979 | INFO     | using path: /tmp/job_11384513/atlas/pilot/slots/0/PanDA_Pilot-7056971119/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 15:43:49] 2026-03-24 14:43:16,979 | INFO     | extracted standard info from prmon json
[2026-03-24 15:43:49] 2026-03-24 14:43:16,979 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 15:43:49] 2026-03-24 14:43:16,979 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 15:43:49] 2026-03-24 14:43:16,979 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 15:43:49] 2026-03-24 14:43:16,979 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 15:43:49] 2026-03-24 14:43:16,980 | INFO     | fitting pss+swap vs Time
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | sum of square deviations: 158737860.0
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | sum of deviations: -3593699466.0
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | mean x: 1774360848.5
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | mean y: 2609346.825
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | intersect: 40172734065.31217
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | chi2: 0.011469394224506688
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | current memory leak: -22.64 B/s (using 80 data points, chi2=0.01)
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | could have reported an average CPU frequency of 2380 MHz (6 samples)
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | ..............................
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | . Timing measurements:
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | . get job = 0 s
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | . initial setup = 2 s
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | . payload setup = 3 s
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | . stage-in = 0 s
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | . payload execution = 5256 s
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | . stage-out = 0 s
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | . log creation = 0 s
[2026-03-24 15:43:49] 2026-03-24 14:43:16,981 | INFO     | ..............................
[2026-03-24 15:43:49] 2026-03-24 14:43:17,106 | INFO     | 
[2026-03-24 15:43:49] 2026-03-24 14:43:17,106 | INFO     | job summary report
[2026-03-24 15:43:49] 2026-03-24 14:43:17,106 | INFO     | --------------------------------------------------
[2026-03-24 15:43:49] 2026-03-24 14:43:17,106 | INFO     | PanDA job id: 7056971119
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | task id: 49180930
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | errors: (none)
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | pilot state: finished 
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | transexitcode: 0
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | exeerrorcode: 0
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | exeerrordiag: 
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | exitcode: 0
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | exitmsg: OK
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | cpuconsumptiontime: 39088 s
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | nevents: 400
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | neventsw: 0
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | pid: 16113
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | pgrp: 16113
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | corecount: 8
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | event service: False
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | sizes: {0: 2280468, 11: 2280468, 5263: 2307122, 5265: 2316206, 5268: 2316344}
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | --------------------------------------------------
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | 
[2026-03-24 15:43:49] 2026-03-24 14:43:17,107 | INFO     | executing command: ls -lF /tmp/job_11384513/atlas/pilot/slots/0
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,118 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 15:43:49] 2026-03-24 14:43:17,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,118 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 15:43:49] 2026-03-24 14:43:17,118 | INFO     | job 7056971119 has completed (purged errors)
[2026-03-24 15:43:49] 2026-03-24 14:43:17,118 | INFO     | overall cleanup function is called
[2026-03-24 15:43:49] 2026-03-24 14:43:18,124 | INFO     | --- collectZombieJob: --- 10, [16113]
[2026-03-24 15:43:49] 2026-03-24 14:43:18,124 | INFO     | zombie collector waiting for pid 16113
[2026-03-24 15:43:49] 2026-03-24 14:43:18,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 15:43:49] 2026-03-24 14:43:18,124 | INFO     | collected zombie processes
[2026-03-24 15:43:49] 2026-03-24 14:43:18,124 | INFO     | will attempt to kill all subprocesses of pid=16113
[2026-03-24 15:43:49] 2026-03-24 14:43:18,224 | INFO     | process IDs to be killed: [16113] (in reverse order)
[2026-03-24 15:43:49] 2026-03-24 14:43:18,262 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 15:43:49] 2026-03-24 14:43:18,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 15:43:49] 2026-03-24 14:43:18,265 | INFO     | did not find any defunct processes belonging to 16113
[2026-03-24 15:43:49] 2026-03-24 14:43:18,268 | INFO     | did not find any defunct processes belonging to 16113
[2026-03-24 15:43:49] 2026-03-24 14:43:18,268 | INFO     | ready for new job
[2026-03-24 15:43:49] 2026-03-24 14:43:18,268 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 15:43:49] 2026-03-24 14:43:18,269 | INFO     | **************************************
[2026-03-24 15:43:49] 2026-03-24 14:43:18,269 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 15:43:49] 2026-03-24 14:43:18,269 | INFO     | **************************************
[2026-03-24 15:43:49] 2026-03-24 14:43:18,269 | INFO     | 
[2026-03-24 15:43:49] 2026-03-24 14:43:18,284 | INFO     | architecture information:
[2026-03-24 15:43:49] 2026-03-24 14:43:18,284 | INFO     | executing command: cat /etc/os-release
[2026-03-24 15:43:49] 2026-03-24 14:43:18,291 | INFO     | cat /etc/os-release:
[2026-03-24 15:43:49] NAME="CentOS Linux"
[2026-03-24 15:43:49] VERSION="7 (Core)"
[2026-03-24 15:43:49] ID="centos"
[2026-03-24 15:43:49] ID_LIKE="rhel fedora"
[2026-03-24 15:43:49] VERSION_ID="7"
[2026-03-24 15:43:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 15:43:49] ANSI_COLOR="0;31"
[2026-03-24 15:43:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 15:43:49] HOME_URL="https://www.centos.org/"
[2026-03-24 15:43:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 15:43:49] 
[2026-03-24 15:43:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 15:43:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 15:43:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 15:43:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 15:43:49] 
[2026-03-24 15:43:49] 2026-03-24 14:43:18,291 | INFO     | **************************************
[2026-03-24 15:43:49] 2026-03-24 14:43:18,794 | INFO     | executing command: df -mP /tmp/job_11384513/atlas/pilot/slots/0
[2026-03-24 15:43:49] 2026-03-24 14:43:18,800 | INFO     | sufficient remaining disk space (223447351296 B)
[2026-03-24 15:43:49] 2026-03-24 14:43:18,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 15:43:49] 2026-03-24 14:43:18,801 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 15:43:49] 2026-03-24 14:43:18,801 | INFO     | update_server=False
[2026-03-24 15:43:49] 2026-03-24 14:43:18,801 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 15:43:49] 2026-03-24 14:43:18,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 15:43:49] 2026-03-24 14:43:18,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 15:43:49] 2026-03-24 14:43:18,801 | INFO     | aborting loop
[2026-03-24 15:43:49] 2026-03-24 14:43:19,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 15:43:49] 2026-03-24 14:43:19,435 | INFO     | all payload control threads have been joined
[2026-03-24 15:43:49] 2026-03-24 14:43:19,523 | INFO     | all data control threads have been joined
[2026-03-24 15:43:49] 2026-03-24 14:43:19,806 | INFO     | [job] retrieve thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:19,806 | INFO     | [job] queue monitor thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:19,806 | INFO     | [job] job monitor thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:19,814 | INFO     | [payload] validate_post thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:19,939 | INFO     | all job control threads have been joined
[2026-03-24 15:43:49] 2026-03-24 14:43:20,085 | INFO     | [data] copytool_in thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:20,440 | INFO     | [payload] control thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:20,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 15:43:49] 2026-03-24 14:43:20,528 | INFO     | [data] control thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:20,824 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:20,852 | INFO     | [payload] failed_post thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:20,914 | INFO     | [job] validate thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:20,944 | INFO     | [job] control thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:21,060 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:21,142 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:21,209 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:21,248 | INFO     | [data] copytool_out thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:24,522 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 15:43:49] 2026-03-24 14:43:26,104 | INFO     | [monitor] cgroup control has ended
[2026-03-24 15:43:49] 2026-03-24 14:43:26,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-24 15:43:49] 2026-03-24 14:43:31,179 | INFO     | all workflow threads have been joined
[2026-03-24 15:43:49] 2026-03-24 14:43:31,179 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 15:43:49] 2026-03-24 14:43:31,179 | INFO     | traces error code: 0
[2026-03-24 15:43:49] 2026-03-24 14:43:31,179 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 15:43:49] 2026-03-24 14:43:49,044 | INFO     | PID=9619 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-24 15:43:49] 2026-03-24 14:43:49,044 | INFO     | .. there are 4 such processes running
[2026-03-24 15:43:49] 2026-03-24 14:43:49,044 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 15:43:49] 2026-03-24 14:43:49,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 15:43:49] 2026-03-24 14:43:49,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 15:43:49] 2026-03-24 14:43:49,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 15:43:49] 2026-03-24 14:43:49,044 | INFO     | [monitor] control thread has ended
[2026-03-24 15:43:49] 2026-03-24 14:43:49,100 [wrapper] ==== pilot stdout END ====
[2026-03-24 15:43:49] 2026-03-24 14:43:49,102 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 15:43:49] 2026-03-24 14:43:49,103 [wrapper] pilotpid: 9619
[2026-03-24 15:43:49] 2026-03-24 14:43:49,104 [wrapper] Pilot exit status: 0
[2026-03-24 15:43:49] 2026-03-24 14:43:49,109 [wrapper] pandaids: 7056971119
[2026-03-24 15:43:49] 2026-03-24 14:43:49,132 [wrapper] cleanup supervisor_pilot 32380 9620
[2026-03-24 15:43:49] 2026-03-24 14:43:49,133 [wrapper] Test setup, not cleaning
[2026-03-24 15:43:49] 2026-03-24 14:43:49,135 [wrapper] apfmon messages muted
[2026-03-24 15:43:49] 2026-03-24 14:43:49,136 [wrapper] ==== wrapper stdout END ====
[2026-03-24 15:43:49] 2026-03-24 14:43:49,137 [wrapper] ==== wrapper stderr END ====
[2026-03-24 15:43:49]  *** Error codes and diagnostics ***
[2026-03-24 15:43:49]     "exeErrorCode": 0,
[2026-03-24 15:43:49]     "exeErrorDiag": "",
[2026-03-24 15:43:49]     "pilotErrorCode": 0,
[2026-03-24 15:43:49]     "pilotErrorDiag": "",
[2026-03-24 15:43:49]  *** Listing of results directory ***
[2026-03-24 15:43:49] total 409040
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user    585013 Mar 16 17:03 pilot3.tar.gz
[2026-03-24 15:43:49] -rwx------ 1 mf493845 unix-user     36322 Mar 16 17:39 runpilot2-wrapper.sh
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user      5111 Mar 16 17:40 queuedata.json
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user       100 Mar 24 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 15:43:49] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 13:20 run_atlas
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user       105 Mar 24 13:20 job.xml
[2026-03-24 15:43:49] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 14:15 start_atlas.sh
[2026-03-24 15:43:49] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 14:15 shared
[2026-03-24 15:43:49] -rw-r--r-- 2 mf493845 unix-user    597554 Mar 24 14:15 input.tar.gz
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user      6390 Mar 24 14:15 init_data.xml
[2026-03-24 15:43:49] -rw-r--r-- 2 mf493845 unix-user 216465347 Mar 24 14:15 EVNT.49134131._000002.pool.root.1
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user         0 Mar 24 14:15 boinc_setup_complete
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user      8192 Mar 24 14:15 boinc_mmap_file
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user         0 Mar 24 14:15 boinc_lockfile
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user      2662 Mar 24 14:15 pandaJob.out
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user   1010550 Mar 24 14:15 agis_schedconf.cvmfs.json
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user   1511579 Mar 24 14:15 agis_ddmendpoints.agis.ALL.json
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user       414 Mar 24 14:15 workernode_map.json
[2026-03-24 15:43:49] drwx------ 5 mf493845 unix-user       440 Mar 24 14:15 pilot3
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user 196264033 Mar 24 15:42 HITS.49180930._000028.pool.root.1
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user      1014 Mar 24 15:43 memory_monitor_summary.json
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user    322366 Mar 24 15:43 log.49180930._000028.job.log.tgz.1
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user      6294 Mar 24 15:43 heartbeat.json
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user       819 Mar 24 15:43 pilotlog.txt
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user        95 Mar 24 15:43 pilot_heartbeat.json
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user    788419 Mar 24 15:43 log.49180930._000028.job.log.1
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user       357 Mar 24 15:43 output.list
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user       620 Mar 24 15:43 runtime_log
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user   1126400 Mar 24 15:43 result.tar.gz
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user       643 Mar 24 15:43 zl1MDm19PM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWEvLDmGiUMan.diag
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user      9219 Mar 24 15:43 runtime_log.err
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user     21887 Mar 24 15:43 stderr.txt
[2026-03-24 15:43:49] HITS file was successfully produced:
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user 196264033 Mar 24 15:42 shared/HITS.pool.root.1
[2026-03-24 15:43:49]  *** Contents of shared directory: ***
[2026-03-24 15:43:49] total 404760
[2026-03-24 15:43:49] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 14:15 start_atlas.sh
[2026-03-24 15:43:49] -rw-r--r-- 2 mf493845 unix-user    597554 Mar 24 14:15 input.tar.gz
[2026-03-24 15:43:49] -rw-r--r-- 2 mf493845 unix-user 216465347 Mar 24 14:15 ATLAS.root_0
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user 196264033 Mar 24 15:42 HITS.pool.root.1
[2026-03-24 15:43:49] -rw------- 1 mf493845 unix-user   1126400 Mar 24 15:43 result.tar.gz
15:43:50 (1634): run_atlas exited; CPU time 39162.799983
15:43:50 (1634): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN