Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:05:11 (7910): wrapper (7.7.26015): starting
12:05:11 (7910): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 12:05:11] Arguments: --nthreads 8
[2026-03-24 12:05:11] Threads: 8
[2026-03-24 12:05:11] Checking for CVMFS
[2026-03-24 12:05:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 12:05:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 12:05:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 12:05:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 12:05:11] 2.11.0.0 3910 235329 91028 157640 1 188 2333017 4096001 4498 130560 6 11009763 99.291 16092411 435 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 12:05:11] CVMFS is ok
[2026-03-24 12:05:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 12:05:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 12:05:11] Further information can be found at the LHC@home message board.
[2026-03-24 12:05:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 12:05:11] Checking for apptainer binary...
[2026-03-24 12:05:11] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 12:05:11] apptainer is not installed, using version from CVMFS
[2026-03-24 12:05:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 12:05:11] WARNING: Environment variable TMPDIR already has value [/tmp/job_11384055/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node290
[2026-03-24 12:05:11] apptainer works
[2026-03-24 12:05:11] Set ATHENA_PROC_NUMBER=8
[2026-03-24 12:05:11] Set ATHENA_CORE_NUMBER=8
[2026-03-24 12:05:11] Starting ATLAS job with PandaID=7063129912
[2026-03-24 12:05:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11384055/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 14:10:37]  *** The last 200 lines of the pilot log: ***
[2026-03-24 14:10:37] 2026-03-24 13:09:46,070 | INFO     | job 7063129912 has finished - writing final server update
[2026-03-24 14:10:37] 2026-03-24 13:09:46,070 | INFO     | total number of processed events: 400 (read)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,087 | INFO     | using path: /tmp/job_11384055/atlas/pilot/slots/0/PanDA_Pilot-7063129912/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,087 | INFO     | extracted standard info from prmon json
[2026-03-24 14:10:37] 2026-03-24 13:09:46,087 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 14:10:37] 2026-03-24 13:09:46,087 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 14:10:37] 2026-03-24 13:09:46,088 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 14:10:37] 2026-03-24 13:09:46,088 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 14:10:37] 2026-03-24 13:09:46,089 | INFO     | fitting pss+swap vs Time
[2026-03-24 14:10:37] 2026-03-24 13:09:46,089 | INFO     | sum of square deviations: 576985702.0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,089 | INFO     | sum of deviations: 11592248643.0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,089 | INFO     | mean x: 1774354056.0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,089 | INFO     | mean y: 2472201.5528455283
[2026-03-24 14:10:37] 2026-03-24 13:09:46,089 | INFO     | intersect: -35646164023.86881
[2026-03-24 14:10:37] 2026-03-24 13:09:46,089 | INFO     | chi2: 1.8214952237974325
[2026-03-24 14:10:37] 2026-03-24 13:09:46,090 | INFO     | sum of square deviations: 509440249.5
[2026-03-24 14:10:37] 2026-03-24 13:09:46,090 | INFO     | sum of deviations: 18332992063.500004
[2026-03-24 14:10:37] 2026-03-24 13:09:46,090 | INFO     | mean x: 1774353903.5
[2026-03-24 14:10:37] 2026-03-24 13:09:46,090 | INFO     | mean y: 2486846.1101694917
[2026-03-24 14:10:37] 2026-03-24 13:09:46,090 | INFO     | intersect: -63850371389.24164
[2026-03-24 14:10:37] 2026-03-24 13:09:46,090 | INFO     | chi2: 1.1387179517893642
[2026-03-24 14:10:37] 2026-03-24 13:09:46,090 | INFO     | current chi2=1.1387179517893642 (change=37.48443932697347 %)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,090 | INFO     | sum of square deviations: 447383272.0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | sum of deviations: 17234458161.0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | mean x: 1774353751.0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | mean y: 2484147.371681416
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | intersect: -68350597870.46226
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | chi2: 1.1396604877532082
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | current chi2=1.1396604877532082 (change=-0.08277167865518274 %)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | right removable region: 112
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | sum of square deviations: 509440249.5
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | sum of deviations: -3875694505.5
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | mean x: 1774354208.5
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | mean y: 2506495.313559322
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | intersect: 13501351283.183527
[2026-03-24 14:10:37] 2026-03-24 13:09:46,091 | INFO     | chi2: 0.7044823363250672
[2026-03-24 14:10:37] 2026-03-24 13:09:46,092 | INFO     | current chi2=0.7044823363250672 (change=61.323953688093106 %)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,092 | INFO     | sum of square deviations: 447383272.0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,092 | INFO     | sum of deviations: -4437737739.0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,092 | INFO     | mean x: 1774354361.0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,092 | INFO     | mean y: 2507871.610619469
[2026-03-24 14:10:37] 2026-03-24 13:09:46,092 | INFO     | intersect: 17602896180.65077
[2026-03-24 14:10:37] 2026-03-24 13:09:46,092 | INFO     | chi2: 0.7041638919061929
[2026-03-24 14:10:37] 2026-03-24 13:09:46,092 | INFO     | current chi2=0.7041638919061929 (change=0.045202612252205364 %)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,092 | INFO     | left removable region: 20
[2026-03-24 14:10:37] 2026-03-24 13:09:46,092 | INFO     | sum of square deviations: 241429643.0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | sum of deviations: 957899012.5
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | mean x: 1774354330.5
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | mean y: 2527870.532608696
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | intersect: -7037420662.2623
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | chi2: 0.0002536150475756931
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | current memory leak: 3.97 B/s (using 92 data points, chi2=0.00)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | could have reported an average CPU frequency of 2768 MHz (8 samples)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | ..............................
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | . Timing measurements:
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | . get job = 0 s
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | . initial setup = 2 s
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | . payload setup = 3 s
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | . stage-in = 0 s
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | . payload execution = 7446 s
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | . stage-out = 0 s
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | . log creation = 0 s
[2026-03-24 14:10:37] 2026-03-24 13:09:46,093 | INFO     | ..............................
[2026-03-24 14:10:37] 2026-03-24 13:09:46,139 | INFO     | 
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | job summary report
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | --------------------------------------------------
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | PanDA job id: 7063129912
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | task id: 49178766
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | errors: (none)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | pilot state: finished 
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | transexitcode: 0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | exeerrorcode: 0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | exeerrordiag: 
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | exitcode: 0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | exitmsg: OK
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | cpuconsumptiontime: 54765 s
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | nevents: 400
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | neventsw: 0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | pid: 16556
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | pgrp: 16556
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | corecount: 8
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | event service: False
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | sizes: {0: 2280428, 11: 2280428, 7453: 2317047, 7455: 2317047, 7456: 2317241}
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | --------------------------------------------------
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | 
[2026-03-24 14:10:37] 2026-03-24 13:09:46,140 | INFO     | executing command: ls -lF /tmp/job_11384055/atlas/pilot/slots/0
[2026-03-24 14:10:37] 2026-03-24 13:09:46,150 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,150 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,150 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,150 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,150 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | job 7063129912 has completed (purged errors)
[2026-03-24 14:10:37] 2026-03-24 13:09:46,151 | INFO     | overall cleanup function is called
[2026-03-24 14:10:37] 2026-03-24 13:09:47,157 | INFO     | --- collectZombieJob: --- 10, [16556]
[2026-03-24 14:10:37] 2026-03-24 13:09:47,157 | INFO     | zombie collector waiting for pid 16556
[2026-03-24 14:10:37] 2026-03-24 13:09:47,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 14:10:37] 2026-03-24 13:09:47,157 | INFO     | collected zombie processes
[2026-03-24 14:10:37] 2026-03-24 13:09:47,157 | INFO     | will attempt to kill all subprocesses of pid=16556
[2026-03-24 14:10:37] 2026-03-24 13:09:47,253 | INFO     | process IDs to be killed: [16556] (in reverse order)
[2026-03-24 14:10:37] 2026-03-24 13:09:47,289 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 14:10:37] 2026-03-24 13:09:47,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 14:10:37] 2026-03-24 13:09:47,293 | INFO     | did not find any defunct processes belonging to 16556
[2026-03-24 14:10:37] 2026-03-24 13:09:47,296 | INFO     | did not find any defunct processes belonging to 16556
[2026-03-24 14:10:37] 2026-03-24 13:09:47,296 | INFO     | ready for new job
[2026-03-24 14:10:37] 2026-03-24 13:09:47,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 14:10:37] 2026-03-24 13:09:47,297 | INFO     | **************************************
[2026-03-24 14:10:37] 2026-03-24 13:09:47,297 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 14:10:37] 2026-03-24 13:09:47,297 | INFO     | **************************************
[2026-03-24 14:10:37] 2026-03-24 13:09:47,297 | INFO     | 
[2026-03-24 14:10:37] 2026-03-24 13:09:47,312 | INFO     | architecture information:
[2026-03-24 14:10:37] 2026-03-24 13:09:47,312 | INFO     | executing command: cat /etc/os-release
[2026-03-24 14:10:37] 2026-03-24 13:09:47,318 | INFO     | cat /etc/os-release:
[2026-03-24 14:10:37] NAME="CentOS Linux"
[2026-03-24 14:10:37] VERSION="7 (Core)"
[2026-03-24 14:10:37] ID="centos"
[2026-03-24 14:10:37] ID_LIKE="rhel fedora"
[2026-03-24 14:10:37] VERSION_ID="7"
[2026-03-24 14:10:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 14:10:37] ANSI_COLOR="0;31"
[2026-03-24 14:10:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 14:10:37] HOME_URL="https://www.centos.org/"
[2026-03-24 14:10:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 14:10:37] 
[2026-03-24 14:10:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 14:10:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 14:10:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 14:10:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 14:10:37] 
[2026-03-24 14:10:37] 2026-03-24 13:09:47,318 | INFO     | **************************************
[2026-03-24 14:10:37] 2026-03-24 13:09:47,821 | INFO     | executing command: df -mP /tmp/job_11384055/atlas/pilot/slots/0
[2026-03-24 14:10:37] 2026-03-24 13:09:47,828 | INFO     | sufficient remaining disk space (225718566912 B)
[2026-03-24 14:10:37] 2026-03-24 13:09:47,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 14:10:37] 2026-03-24 13:09:47,828 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 14:10:37] 2026-03-24 13:09:47,828 | INFO     | update_server=False
[2026-03-24 14:10:37] 2026-03-24 13:09:47,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 14:10:37] 2026-03-24 13:09:47,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 14:10:37] 2026-03-24 13:09:48,198 | INFO     | all job control threads have been joined
[2026-03-24 14:10:37] 2026-03-24 13:09:48,294 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-24 14:10:37] 2026-03-24 13:09:48,294 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-24 14:10:37] 2026-03-24 13:09:48,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 14:10:37] 2026-03-24 13:09:48,295 | INFO     | will abort loop
[2026-03-24 14:10:37] 2026-03-24 13:09:48,639 | INFO     | all data control threads have been joined
[2026-03-24 14:10:37] 2026-03-24 13:09:48,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 14:10:37] 2026-03-24 13:09:48,833 | INFO     | [job] retrieve thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:48,834 | INFO     | [job] queue monitor thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:48,882 | INFO     | all payload control threads have been joined
[2026-03-24 14:10:37] 2026-03-24 13:09:49,186 | INFO     | [payload] failed_post thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:49,203 | INFO     | [job] control thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:49,300 | INFO     | [job] job monitor thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:49,305 | INFO     | [job] validate thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:49,575 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:49,610 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:49,645 | INFO     | [data] control thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:49,887 | INFO     | [payload] control thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:49,903 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:49,964 | INFO     | [data] copytool_in thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:49,993 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:50,017 | INFO     | [payload] validate_post thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:50,647 | INFO     | [data] copytool_out thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:09:51,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 14:10:37] 2026-03-24 13:09:55,258 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 14:10:37] 2026-03-24 13:10:18,969 | INFO     | PID=11865 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-24 14:10:37] 2026-03-24 13:10:18,969 | INFO     | .. there are 4 such processes running
[2026-03-24 14:10:37] 2026-03-24 13:10:18,969 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 14:10:37] 2026-03-24 13:10:18,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 14:10:37] 2026-03-24 13:10:18,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 14:10:37] 2026-03-24 13:10:30,455 | INFO     | [monitor] cgroup control has ended
[2026-03-24 14:10:37] 2026-03-24 13:10:32,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-24 14:10:37] 2026-03-24 13:10:33,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 14:10:37] 2026-03-24 13:10:33,039 | INFO     | [monitor] control thread has ended
[2026-03-24 14:10:37] 2026-03-24 13:10:37,523 | INFO     | all workflow threads have been joined
[2026-03-24 14:10:37] 2026-03-24 13:10:37,523 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 14:10:37] 2026-03-24 13:10:37,523 | INFO     | traces error code: 0
[2026-03-24 14:10:37] 2026-03-24 13:10:37,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 14:10:37] 2026-03-24 13:10:37,575 [wrapper] ==== pilot stdout END ====
[2026-03-24 14:10:37] 2026-03-24 13:10:37,576 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 14:10:37] 2026-03-24 13:10:37,577 [wrapper] pilotpid: 11865
[2026-03-24 14:10:37] 2026-03-24 13:10:37,579 [wrapper] Pilot exit status: 0
[2026-03-24 14:10:37] 2026-03-24 13:10:37,583 [wrapper] pandaids: 7063129912
[2026-03-24 14:10:37] 2026-03-24 13:10:37,607 [wrapper] cleanup supervisor_pilot  9305 11866
[2026-03-24 14:10:37] 2026-03-24 13:10:37,608 [wrapper] Test setup, not cleaning
[2026-03-24 14:10:37] 2026-03-24 13:10:37,609 [wrapper] apfmon messages muted
[2026-03-24 14:10:37] 2026-03-24 13:10:37,610 [wrapper] ==== wrapper stdout END ====
[2026-03-24 14:10:37] 2026-03-24 13:10:37,611 [wrapper] ==== wrapper stderr END ====
[2026-03-24 14:10:37]  *** Error codes and diagnostics ***
[2026-03-24 14:10:37]     "exeErrorCode": 0,
[2026-03-24 14:10:37]     "exeErrorDiag": "",
[2026-03-24 14:10:37]     "pilotErrorCode": 0,
[2026-03-24 14:10:37]     "pilotErrorDiag": "",
[2026-03-24 14:10:37]  *** Listing of results directory ***
[2026-03-24 14:10:37] total 473548
[2026-03-24 14:10:37] -rwx------ 1 mf493845 unix-user     36322 Mar 23 12:38 runpilot2-wrapper.sh
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user      5111 Mar 23 12:38 queuedata.json
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user    585013 Mar 23 12:39 pilot3.tar.gz
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user       100 Mar 24 11:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 14:10:37] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 11:03 run_atlas
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user       105 Mar 24 11:03 job.xml
[2026-03-24 14:10:37] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 12:05 shared
[2026-03-24 14:10:37] -rw-r--r-- 2 mf493845 unix-user    597544 Mar 24 12:05 input.tar.gz
[2026-03-24 14:10:37] -rw-r--r-- 2 mf493845 unix-user 242204832 Mar 24 12:05 EVNT.49129688._000007.pool.root.1
[2026-03-24 14:10:37] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 12:05 start_atlas.sh
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user      6390 Mar 24 12:05 init_data.xml
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user         0 Mar 24 12:05 boinc_setup_complete
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user      8192 Mar 24 12:05 boinc_mmap_file
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user         0 Mar 24 12:05 boinc_lockfile
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user      2615 Mar 24 12:05 pandaJob.out
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user   1010550 Mar 24 12:05 agis_schedconf.cvmfs.json
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user   1511579 Mar 24 12:05 agis_ddmendpoints.agis.ALL.json
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user       420 Mar 24 12:05 workernode_map.json
[2026-03-24 14:10:37] drwx------ 5 mf493845 unix-user       440 Mar 24 12:05 pilot3
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user 235839195 Mar 24 14:09 HITS.49178766._000169.pool.root.1
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user      1021 Mar 24 14:09 memory_monitor_summary.json
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user    373458 Mar 24 14:09 log.49178766._000169.job.log.tgz.1
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user      6310 Mar 24 14:09 heartbeat.json
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user        95 Mar 24 14:10 pilot_heartbeat.json
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user      5017 Mar 24 14:10 pilotlog.txt
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user   1102688 Mar 24 14:10 log.49178766._000169.job.log.1
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user       357 Mar 24 14:10 output.list
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user       620 Mar 24 14:10 runtime_log
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user   1495040 Mar 24 14:10 result.tar.gz
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user      9219 Mar 24 14:10 runtime_log.err
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user       644 Mar 24 14:10 BAEODm0msO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcKAMDmDdxQym.diag
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user     21474 Mar 24 14:10 stderr.txt
[2026-03-24 14:10:37] HITS file was successfully produced:
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user 235839195 Mar 24 14:09 shared/HITS.pool.root.1
[2026-03-24 14:10:37]  *** Contents of shared directory: ***
[2026-03-24 14:10:37] total 468904
[2026-03-24 14:10:37] -rw-r--r-- 2 mf493845 unix-user    597544 Mar 24 12:05 input.tar.gz
[2026-03-24 14:10:37] -rw-r--r-- 2 mf493845 unix-user 242204832 Mar 24 12:05 ATLAS.root_0
[2026-03-24 14:10:37] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 12:05 start_atlas.sh
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user 235839195 Mar 24 14:09 HITS.pool.root.1
[2026-03-24 14:10:37] -rw------- 1 mf493845 unix-user   1495040 Mar 24 14:10 result.tar.gz
14:10:38 (7910): run_atlas exited; CPU time 54871.036613
14:10:38 (7910): called boinc_finish(0)

</stderr_txt>
]]>

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