Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:18:00 (1772143): wrapper (7.7.26015): starting
11:18:00 (1772143): wrapper: running run_atlas (--nthreads 4)
[2026-03-25 11:18:00] Arguments: --nthreads 4
[2026-03-25 11:18:00] Threads: 4
[2026-03-25 11:18:00] Checking for CVMFS
[2026-03-25 11:18:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 11:18:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 11:18:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 11:18:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 11:18:01] 2.11.0.0 244521 4116 97160 157682 3 90 3133291 4096000 6384 130560 0 6647919 99.994 135512 1402 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-25 11:18:01] CVMFS is ok
[2026-03-25 11:18:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 11:18:01] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-25 11:18:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-25 11:18:01] Further information can be found at the LHC@home message board.
[2026-03-25 11:18:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 11:18:01] Checking for apptainer binary...
[2026-03-25 11:18:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 11:18:01] Running /usr/bin/apptainer --version
[2026-03-25 11:18:01] apptainer version 1.4.5
[2026-03-25 11:18:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 11:18:01] x32-linux2
[2026-03-25 11:18:01] apptainer works
[2026-03-25 11:18:01] Set ATHENA_PROC_NUMBER=4
[2026-03-25 11:18:01] Set ATHENA_CORE_NUMBER=4
[2026-03-25 11:18:01] Starting ATLAS job with PandaID=7056986564
[2026-03-25 11:18:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 16:27:06]  *** The last 200 lines of the pilot log: ***
[2026-03-25 16:27:06] 2026-03-25 20:26:34,111 | INFO     | preparing for final server update for job 7056986564 in state='finished'
[2026-03-25 16:27:06] 2026-03-25 20:26:34,111 | INFO     | reading metadata from: /var/lib/boinc-client/slots/6/PanDA_Pilot-7056986564/jobReport.json
[2026-03-25 16:27:06] 2026-03-25 20:26:34,113 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/6/workernode_map.json
[2026-03-25 16:27:06] 2026-03-25 20:26:34,113 | INFO     | this job has now completed (state=finished)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,113 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,113 | INFO     | log transfer has been attempted: DONE
[2026-03-25 16:27:06] 2026-03-25 20:26:34,113 | INFO     | job 7056986564 has finished - writing final server update
[2026-03-25 16:27:06] 2026-03-25 20:26:34,113 | INFO     | total number of processed events: 400 (read)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,120 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7056986564/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,120 | INFO     | extracted standard info from prmon json
[2026-03-25 16:27:06] 2026-03-25 20:26:34,120 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 16:27:06] 2026-03-25 20:26:34,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 16:27:06] 2026-03-25 20:26:34,121 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 16:27:06] 2026-03-25 20:26:34,121 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 16:27:06] 2026-03-25 20:26:34,124 | INFO     | fitting pss+swap vs Time
[2026-03-25 16:27:06] 2026-03-25 20:26:34,124 | INFO     | sum of square deviations: 8625843592.0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,126 | INFO     | sum of deviations: -84834878066.0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,126 | INFO     | mean x: 1774461129.0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,126 | INFO     | mean y: 2376906.306930693
[2026-03-25 16:27:06] 2026-03-25 20:26:34,126 | INFO     | intersect: 17454141699.629383
[2026-03-25 16:27:06] 2026-03-25 20:26:34,127 | INFO     | chi2: 1.6400710970985062
[2026-03-25 16:27:06] 2026-03-25 20:26:34,127 | INFO     | sum of square deviations: 8205826414.5
[2026-03-25 16:27:06] 2026-03-25 20:26:34,129 | INFO     | sum of deviations: -83340937527.5
[2026-03-25 16:27:06] 2026-03-25 20:26:34,129 | INFO     | mean x: 1774460976.5
[2026-03-25 16:27:06] 2026-03-25 20:26:34,129 | INFO     | mean y: 2377448.775167785
[2026-03-25 16:27:06] 2026-03-25 20:26:34,129 | INFO     | intersect: 18024357675.672783
[2026-03-25 16:27:06] 2026-03-25 20:26:34,129 | INFO     | chi2: 1.6348475922298489
[2026-03-25 16:27:06] 2026-03-25 20:26:34,129 | INFO     | current chi2=1.6348475922298489 (change=0.31849258717493073 %)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,129 | INFO     | right removable region: 297
[2026-03-25 16:27:06] 2026-03-25 20:26:34,129 | INFO     | sum of square deviations: 8205826414.5
[2026-03-25 16:27:06] 2026-03-25 20:26:34,131 | INFO     | sum of deviations: -112058111359.0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,131 | INFO     | mean x: 1774461281.5
[2026-03-25 16:27:06] 2026-03-25 20:26:34,131 | INFO     | mean y: 2386656.879194631
[2026-03-25 16:27:06] 2026-03-25 20:26:34,132 | INFO     | intersect: 24234288459.383606
[2026-03-25 16:27:06] 2026-03-25 20:26:34,132 | INFO     | chi2: 0.46585712374347993
[2026-03-25 16:27:06] 2026-03-25 20:26:34,132 | INFO     | current chi2=0.46585712374347993 (change=71.59530921753085 %)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,132 | INFO     | sum of square deviations: 7799669962.0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,134 | INFO     | sum of deviations: -99489746327.99998
[2026-03-25 16:27:06] 2026-03-25 20:26:34,134 | INFO     | mean x: 1774461434.0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,134 | INFO     | mean y: 2381929.433447099
[2026-03-25 16:27:06] 2026-03-25 20:26:34,134 | INFO     | intersect: 22636765024.818977
[2026-03-25 16:27:06] 2026-03-25 20:26:34,134 | INFO     | chi2: 0.4433242211649668
[2026-03-25 16:27:06] 2026-03-25 20:26:34,134 | INFO     | current chi2=0.4433242211649668 (change=4.836869810521711 %)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,134 | INFO     | left removable region: 20
[2026-03-25 16:27:06] 2026-03-25 20:26:34,135 | INFO     | sum of square deviations: 6590404498.0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,136 | INFO     | sum of deviations: -68676098114.0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,136 | INFO     | mean x: 1774461556.0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,136 | INFO     | mean y: 2370825.750902527
[2026-03-25 16:27:06] 2026-03-25 20:26:34,136 | INFO     | intersect: 18493359649.935986
[2026-03-25 16:27:06] 2026-03-25 20:26:34,137 | INFO     | chi2: 0.35230433472271266
[2026-03-25 16:27:06] 2026-03-25 20:26:34,137 | INFO     | current memory leak: -10.42 B/s (using 277 data points, chi2=0.35)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,137 | INFO     | could have reported an average CPU frequency of 3811 MHz (14 samples)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,137 | INFO     | ..............................
[2026-03-25 16:27:06] 2026-03-25 20:26:34,137 | INFO     | . Timing measurements:
[2026-03-25 16:27:06] 2026-03-25 20:26:34,137 | INFO     | . get job = 0 s
[2026-03-25 16:27:06] 2026-03-25 20:26:34,137 | INFO     | . initial setup = 5 s
[2026-03-25 16:27:06] 2026-03-25 20:26:34,137 | INFO     | . payload setup = 7 s
[2026-03-25 16:27:06] 2026-03-25 20:26:34,137 | INFO     | . stage-in = 0 s
[2026-03-25 16:27:06] 2026-03-25 20:26:34,138 | INFO     | . payload execution = 18472 s
[2026-03-25 16:27:06] 2026-03-25 20:26:34,138 | INFO     | . stage-out = 1 s
[2026-03-25 16:27:06] 2026-03-25 20:26:34,138 | INFO     | . log creation = 0 s
[2026-03-25 16:27:06] 2026-03-25 20:26:34,138 | INFO     | ..............................
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | 
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | job summary report
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | --------------------------------------------------
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | PanDA job id: 7056986564
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | task id: 49182650
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | errors: (none)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | pilot state: finished 
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | transexitcode: 0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | exeerrorcode: 0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | exeerrordiag: 
[2026-03-25 16:27:06] 2026-03-25 20:26:34,201 | INFO     | exitcode: 0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | exitmsg: OK
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | cpuconsumptiontime: 72007 s
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | nevents: 400
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | neventsw: 0
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | pid: 1780898
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | pgrp: 1780898
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | corecount: 4
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | event service: False
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | sizes: {0: 2279899, 1: 2280360, 11: 2280360, 18483: 2312916, 18486: 2321928, 18487: 2321984, 18488: 2322306}
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | --------------------------------------------------
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | 
[2026-03-25 16:27:06] 2026-03-25 20:26:34,202 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-03-25 16:27:06] 2026-03-25 20:26:34,218 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,218 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,218 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | job 7056986564 has completed (purged errors)
[2026-03-25 16:27:06] 2026-03-25 20:26:34,219 | INFO     | overall cleanup function is called
[2026-03-25 16:27:06] 2026-03-25 20:26:34,393 | INFO     | PID=1776327 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 16:27:06] 2026-03-25 20:26:34,393 | INFO     | .. there are 8 such processes running
[2026-03-25 16:27:06] 2026-03-25 20:26:35,227 | INFO     | --- collectZombieJob: --- 10, [1780898]
[2026-03-25 16:27:06] 2026-03-25 20:26:35,227 | INFO     | zombie collector waiting for pid 1780898
[2026-03-25 16:27:06] 2026-03-25 20:26:35,227 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 16:27:06] 2026-03-25 20:26:35,227 | INFO     | collected zombie processes
[2026-03-25 16:27:06] 2026-03-25 20:26:35,227 | INFO     | will attempt to kill all subprocesses of pid=1780898
[2026-03-25 16:27:06] 2026-03-25 20:26:35,372 | INFO     | process IDs to be killed: [1780898] (in reverse order)
[2026-03-25 16:27:06] 2026-03-25 20:26:35,426 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 16:27:06] 2026-03-25 20:26:35,426 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 16:27:06] 2026-03-25 20:26:35,430 | INFO     | did not find any defunct processes belonging to 1780898
[2026-03-25 16:27:06] 2026-03-25 20:26:35,434 | INFO     | did not find any defunct processes belonging to 1780898
[2026-03-25 16:27:06] 2026-03-25 20:26:35,434 | INFO     | ready for new job
[2026-03-25 16:27:06] 2026-03-25 20:26:35,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 16:27:06] 2026-03-25 20:26:35,436 | INFO     | **************************************
[2026-03-25 16:27:06] 2026-03-25 20:26:35,436 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 16:27:06] 2026-03-25 20:26:35,436 | INFO     | **************************************
[2026-03-25 16:27:06] 2026-03-25 20:26:35,436 | INFO     | 
[2026-03-25 16:27:06] 2026-03-25 20:26:35,438 | INFO     | architecture information:
[2026-03-25 16:27:06] 2026-03-25 20:26:35,438 | INFO     | executing command: cat /etc/os-release
[2026-03-25 16:27:06] 2026-03-25 20:26:35,449 | INFO     | cat /etc/os-release:
[2026-03-25 16:27:06] NAME="CentOS Linux"
[2026-03-25 16:27:06] VERSION="7 (Core)"
[2026-03-25 16:27:06] ID="centos"
[2026-03-25 16:27:06] ID_LIKE="rhel fedora"
[2026-03-25 16:27:06] VERSION_ID="7"
[2026-03-25 16:27:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 16:27:06] ANSI_COLOR="0;31"
[2026-03-25 16:27:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 16:27:06] HOME_URL="https://www.centos.org/"
[2026-03-25 16:27:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 16:27:06] 
[2026-03-25 16:27:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 16:27:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 16:27:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 16:27:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 16:27:06] 
[2026-03-25 16:27:06] 2026-03-25 20:26:35,450 | INFO     | **************************************
[2026-03-25 16:27:06] 2026-03-25 20:26:35,952 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-03-25 16:27:06] 2026-03-25 20:26:35,965 | INFO     | sufficient remaining disk space (406674472960 B)
[2026-03-25 16:27:06] 2026-03-25 20:26:35,966 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 16:27:06] 2026-03-25 20:26:35,966 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 16:27:06] 2026-03-25 20:26:35,966 | INFO     | update_server=False
[2026-03-25 16:27:06] 2026-03-25 20:26:35,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 16:27:06] 2026-03-25 20:26:35,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 16:27:06] 2026-03-25 20:26:35,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 16:27:06] 2026-03-25 20:26:35,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 16:27:06] 2026-03-25 20:26:35,967 | INFO     | aborting loop
[2026-03-25 16:27:06] 2026-03-25 20:26:35,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 16:27:06] 2026-03-25 20:26:36,079 | INFO     | all data control threads have been joined
[2026-03-25 16:27:06] 2026-03-25 20:26:36,970 | INFO     | [job] queue monitor thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:36,971 | INFO     | [job] retrieve thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:36,972 | INFO     | [job] job monitor thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:37,080 | INFO     | [data] control thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:37,183 | INFO     | all job control threads have been joined
[2026-03-25 16:27:06] 2026-03-25 20:26:37,337 | INFO     | all payload control threads have been joined
[2026-03-25 16:27:06] 2026-03-25 20:26:37,635 | INFO     | [job] validate thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:37,763 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:37,838 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:37,971 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:37,972 | INFO     | [data] copytool_out thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:38,095 | INFO     | [payload] failed_post thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:38,187 | INFO     | [job] control thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:38,250 | INFO     | [data] copytool_in thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:38,342 | INFO     | [payload] control thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:38,534 | INFO     | [payload] validate_post thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:39,972 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:45,583 | INFO     | [monitor] cgroup control has ended
[2026-03-25 16:27:06] 2026-03-25 20:26:46,939 | INFO     | job.realtimelogging is not enabled
[2026-03-25 16:27:06] 2026-03-25 20:26:47,944 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 16:27:06] 2026-03-25 20:26:48,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522918139712)>', '<ExcThread(monitor, started 140522555414272)>']
[2026-03-25 16:27:06] 2026-03-25 20:26:53,589 | INFO     | all workflow threads have been joined
[2026-03-25 16:27:06] 2026-03-25 20:26:53,589 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 16:27:06] 2026-03-25 20:26:53,589 | INFO     | traces error code: 0
[2026-03-25 16:27:06] 2026-03-25 20:26:53,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 16:27:06] 2026-03-25 20:27:06,619 | INFO     | PID=1776327 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 16:27:06] 2026-03-25 20:27:06,620 | INFO     | .. there are 8 such processes running
[2026-03-25 16:27:06] 2026-03-25 20:27:06,620 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 16:27:06] 2026-03-25 20:27:06,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 16:27:06] 2026-03-25 20:27:06,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 16:27:06] 2026-03-25 20:27:06,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 16:27:06] 2026-03-25 20:27:06,620 | INFO     | [monitor] control thread has ended
[2026-03-25 16:27:06] 2026-03-25 20:27:06,689 [wrapper] ==== pilot stdout END ====
[2026-03-25 16:27:06] 2026-03-25 20:27:06,691 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 16:27:06] 2026-03-25 20:27:06,693 [wrapper] pilotpid: 1776327
[2026-03-25 16:27:06] 2026-03-25 20:27:06,695 [wrapper] Pilot exit status: 0
[2026-03-25 16:27:06] 2026-03-25 20:27:06,701 [wrapper] pandaids: 7056986564
[2026-03-25 16:27:06] 2026-03-25 20:27:06,736 [wrapper] cleanup supervisor_pilot 1899841 1776328
[2026-03-25 16:27:06] 2026-03-25 20:27:06,738 [wrapper] Test setup, not cleaning
[2026-03-25 16:27:06] 2026-03-25 20:27:06,741 [wrapper] apfmon messages muted
[2026-03-25 16:27:06] 2026-03-25 20:27:06,743 [wrapper] ==== wrapper stdout END ====
[2026-03-25 16:27:06] 2026-03-25 20:27:06,745 [wrapper] ==== wrapper stderr END ====
[2026-03-25 16:27:06]  *** Error codes and diagnostics ***
[2026-03-25 16:27:06]     "exeErrorCode": 0,
[2026-03-25 16:27:06]     "exeErrorDiag": "",
[2026-03-25 16:27:06]     "pilotErrorCode": 0,
[2026-03-25 16:27:06]     "pilotErrorDiag": "",
[2026-03-25 16:27:06]  *** Listing of results directory ***
[2026-03-25 16:27:06] total 487920
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc    585013 Mar 16 17:25 pilot3.tar.gz
[2026-03-25 16:27:06] -rwx------ 1 boinc boinc     36322 Mar 16 17:29 runpilot2-wrapper.sh
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc      5111 Mar 16 17:30 queuedata.json
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc       100 Mar 25 11:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 16:27:06] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 11:17 run_atlas
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc       105 Mar 25 11:17 job.xml
[2026-03-25 16:27:06] -rw-r--r-- 2 boinc boinc 241224241 Mar 25 11:18 EVNT.49137741._000020.pool.root.1
[2026-03-25 16:27:06] -rw-r--r-- 2 boinc boinc     15845 Mar 25 11:18 start_atlas.sh
[2026-03-25 16:27:06] drwxrwx--x 2 boinc boinc      4096 Mar 25 11:18 shared
[2026-03-25 16:27:06] -rw-r--r-- 2 boinc boinc    597550 Mar 25 11:18 input.tar.gz
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc         0 Mar 25 11:18 boinc_setup_complete
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc      6477 Mar 25 11:18 init_data.xml
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc         0 Mar 25 11:18 boinc_lockfile
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc      2633 Mar 25 11:18 pandaJob.out
[2026-03-25 16:27:06] -rw------- 1 boinc boinc   1011166 Mar 25 11:18 agis_schedconf.cvmfs.json
[2026-03-25 16:27:06] -rw------- 1 boinc boinc       419 Mar 25 11:18 workernode_map.json
[2026-03-25 16:27:06] drwx------ 5 boinc boinc      4096 Mar 25 11:18 pilot3
[2026-03-25 16:27:06] -rw------- 1 boinc boinc 248277629 Mar 25 16:26 HITS.49182650._000482.pool.root.1
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc       530 Mar 25 16:26 boinc_task_state.xml
[2026-03-25 16:27:06] -rw------- 1 boinc boinc      1026 Mar 25 16:26 memory_monitor_summary.json
[2026-03-25 16:27:06] -rw------- 1 boinc boinc   1511579 Mar 25 16:26 agis_ddmendpoints.agis.ALL.json
[2026-03-25 16:27:06] -rw------- 1 boinc boinc    453855 Mar 25 16:26 log.49182650._000482.job.log.tgz.1
[2026-03-25 16:27:06] -rw------- 1 boinc boinc      6281 Mar 25 16:26 heartbeat.json
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc        28 Mar 25 16:27 wrapper_checkpoint.txt
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc      8192 Mar 25 16:27 boinc_mmap_file
[2026-03-25 16:27:06] -rw------- 1 boinc boinc       822 Mar 25 16:27 pilotlog.txt
[2026-03-25 16:27:06] -rw------- 1 boinc boinc        95 Mar 25 16:27 pilot_heartbeat.json
[2026-03-25 16:27:06] -rw------- 1 boinc boinc   2642477 Mar 25 16:27 log.49182650._000482.job.log.1
[2026-03-25 16:27:06] -rw------- 1 boinc boinc       357 Mar 25 16:27 output.list
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc       620 Mar 25 16:27 runtime_log
[2026-03-25 16:27:06] -rw------- 1 boinc boinc   3112960 Mar 25 16:27 result.tar.gz
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc      8892 Mar 25 16:27 runtime_log.err
[2026-03-25 16:27:06] -rw------- 1 boinc boinc       647 Mar 25 16:27 LyJMDmQgUM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqBwLDm2zJ0qn.diag
[2026-03-25 16:27:06] -rw-r--r-- 1 boinc boinc     21430 Mar 25 16:27 stderr.txt
[2026-03-25 16:27:06] HITS file was successfully produced:
[2026-03-25 16:27:06] -rw------- 1 boinc boinc 248277629 Mar 25 16:26 shared/HITS.pool.root.1
[2026-03-25 16:27:06]  *** Contents of shared directory: ***
[2026-03-25 16:27:06] total 481680
[2026-03-25 16:27:06] -rw-r--r-- 2 boinc boinc 241224241 Mar 25 11:18 ATLAS.root_0
[2026-03-25 16:27:06] -rw-r--r-- 2 boinc boinc     15845 Mar 25 11:18 start_atlas.sh
[2026-03-25 16:27:06] -rw-r--r-- 2 boinc boinc    597550 Mar 25 11:18 input.tar.gz
[2026-03-25 16:27:06] -rw------- 1 boinc boinc 248277629 Mar 25 16:26 HITS.pool.root.1
[2026-03-25 16:27:06] -rw------- 1 boinc boinc   3112960 Mar 25 16:27 result.tar.gz
16:27:08 (1772143): run_atlas exited; CPU time 72287.752629
16:27:08 (1772143): called boinc_finish(0)

</stderr_txt>
]]>

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