Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:24:42 (3387371): wrapper (7.7.26015): starting
06:24:42 (3387371): wrapper: running run_atlas (--nthreads 12)
[2026-03-26 06:24:42] Arguments: --nthreads 12
[2026-03-26 06:24:42] Threads: 12
[2026-03-26 06:24:42] Checking for CVMFS
[2026-03-26 06:24:42] No cvmfs_config command found, will try listing directly
[2026-03-26 06:24:42] CVMFS is ok
[2026-03-26 06:24:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 06:24:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 06:24:42] Further information can be found at the LHC@home message board.
[2026-03-26 06:24:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 06:24:42] Checking for apptainer binary...
[2026-03-26 06:24:42] which: no apptainer in ((null))
[2026-03-26 06:24:42] apptainer is not installed, using version from CVMFS
[2026-03-26 06:24:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 06:24:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-26 06:24:42] apptainer works
[2026-03-26 06:24:42] Set ATHENA_PROC_NUMBER=12
[2026-03-26 06:24:42] Set ATHENA_CORE_NUMBER=12
[2026-03-26 06:24:42] Starting ATLAS job with PandaID=7060420007
[2026-03-26 06:24:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 07:30:03]  *** The last 200 lines of the pilot log: ***
[2026-03-26 07:30:03] ]
[2026-03-26 07:30:03] 2026-03-26 06:29:14,477 | INFO     | transferring file log.49180885._000499.job.log.tgz.1 from /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7060420007/log.49180885._000499.job.log.tgz.1 to /var/lib/
[2026-03-26 07:30:03] 2026-03-26 06:29:14,477 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7060420007/log.49180885._000499.job.log.tgz.1 /var/lib/boinc/var/slot204/slots/1/
[2026-03-26 07:30:03] 2026-03-26 06:29:14,494 | INFO     | adding to output.list: log.49180885._000499.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/94/log.49180885._000499.job.log.tg
[2026-03-26 07:30:03] 2026-03-26 06:29:14,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-26 07:30:03] 2026-03-26 06:29:14,494 | INFO     | summary of transferred files:
[2026-03-26 07:30:03] 2026-03-26 06:29:14,494 | INFO     |  -- lfn=log.49180885._000499.job.log.tgz.1, status_code=0, status=transferred
[2026-03-26 07:30:03] 2026-03-26 06:29:14,494 | INFO     | stage-out finished correctly
[2026-03-26 07:30:03] 2026-03-26 06:29:14,652 | INFO     | time since job start (3863s) is within the limit (345600.0s)
[2026-03-26 07:30:03] 2026-03-26 06:29:16,653 | INFO     | time since job start (3865s) is within the limit (345600.0s)
[2026-03-26 07:30:03] 2026-03-26 06:29:16,882 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-26 07:30:03] 2026-03-26 06:29:17,207 | WARNING  | process 3404791 can no longer be monitored (due to stat problems) - aborting
[2026-03-26 07:30:03] 2026-03-26 06:29:17,208 | INFO     | using path: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7060420007/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 07:30:03] 2026-03-26 06:29:17,208 | INFO     | using path: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7060420007/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 07:30:03] 2026-03-26 06:29:17,208 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-26 07:30:03] 2026-03-26 06:29:17,208 | WARNING  | maxPSS not found in memory monitor output
[2026-03-26 07:30:03] 2026-03-26 06:29:17,208 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4238436 B
[2026-03-26 07:30:03] 2026-03-26 06:29:17,208 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16329 B
[2026-03-26 07:30:03] 2026-03-26 06:29:17,208 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/1
[2026-03-26 07:30:03] 2026-03-26 06:29:17,223 | INFO     | sufficient remaining disk space (133990187008 B)
[2026-03-26 07:30:03] 2026-03-26 06:29:17,224 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-26 07:30:03] 2026-03-26 06:29:17,224 | INFO     | size of work directory /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7060420007: 4532667 B (within 5033164800 B limit)
[2026-03-26 07:30:03] 2026-03-26 06:29:17,224 | INFO     | pfn file=/var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7060420007/HITS.49180885._000499.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-26 07:30:03] 2026-03-26 06:29:17,224 | INFO     | total size of present files: 0 B (workdir size: 4532667 B)
[2026-03-26 07:30:03] 2026-03-26 06:29:17,224 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7060420007/HITS.49180885._000499.pool.root.1 since it does not exist
[2026-03-26 07:30:03] 2026-03-26 06:29:17,568 | INFO     | number of running child processes to parent process 3404791: 1
[2026-03-26 07:30:03] 2026-03-26 06:29:17,568 | INFO     | maximum number of monitored processes: 6
[2026-03-26 07:30:03] 2026-03-26 06:29:18,470 | INFO     | job 7060420007 has state=finished
[2026-03-26 07:30:03] 2026-03-26 06:29:18,470 | INFO     | preparing for final server update for job 7060420007 in state='finished'
[2026-03-26 07:30:03] 2026-03-26 06:29:18,659 | INFO     | time since job start (3867s) is within the limit (345600.0s)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,033 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,033 | INFO     | reading metadata from: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7060420007/jobReport.json
[2026-03-26 07:30:03] 2026-03-26 06:29:19,034 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot204/slots/1/workernode_map.json
[2026-03-26 07:30:03] 2026-03-26 06:29:19,035 | INFO     | this job has now completed (state=finished)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,035 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,035 | INFO     | log transfer has been attempted: DONE
[2026-03-26 07:30:03] 2026-03-26 06:29:19,035 | INFO     | job 7060420007 has finished - writing final server update
[2026-03-26 07:30:03] 2026-03-26 06:29:19,035 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3341588/.job.ad'
[2026-03-26 07:30:03] 2026-03-26 06:29:19,035 | INFO     | total number of processed events: 400 (read)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,051 | INFO     | using path: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7060420007/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,052 | INFO     | extracted standard info from prmon json
[2026-03-26 07:30:03] 2026-03-26 06:29:19,052 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 07:30:03] 2026-03-26 06:29:19,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 07:30:03] 2026-03-26 06:29:19,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 07:30:03] 2026-03-26 06:29:19,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | fitting pss+swap vs Time
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | sum of square deviations: 54438230.0
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | sum of deviations: -47178986.0
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | mean x: 1774504693.5
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | mean y: 2764030.1071428573
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | intersect: 1540641585.853735
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | chi2: 0.0024119673978096248
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | current memory leak: -0.87 B/s (using 56 data points, chi2=0.00)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | could have reported an average CPU frequency of 3642 MHz (6 samples)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | ..............................
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | . Timing measurements:
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | . get job = 0 s
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | . initial setup = 3 s
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | . payload setup = 5 s
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | . stage-in = 0 s
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | . payload execution = 3842 s
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | . stage-out = 0 s
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | . log creation = 0 s
[2026-03-26 07:30:03] 2026-03-26 06:29:19,053 | INFO     | ..............................
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | 
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | job summary report
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | --------------------------------------------------
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | PanDA job id: 7060420007
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | task id: 49180885
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | errors: (none)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | pilot state: finished 
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | transexitcode: 0
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | exeerrorcode: 0
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | exeerrordiag: 
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | exitcode: 0
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | exitmsg: OK
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | cpuconsumptiontime: 42832 s
[2026-03-26 07:30:03] 2026-03-26 06:29:19,097 | INFO     | nevents: 400
[2026-03-26 07:30:03] 2026-03-26 06:29:19,098 | INFO     | neventsw: 0
[2026-03-26 07:30:03] 2026-03-26 06:29:19,098 | INFO     | pid: 3404791
[2026-03-26 07:30:03] 2026-03-26 06:29:19,098 | INFO     | pgrp: 3404791
[2026-03-26 07:30:03] 2026-03-26 06:29:19,098 | INFO     | corecount: 12
[2026-03-26 07:30:03] 2026-03-26 06:29:19,098 | INFO     | event service: False
[2026-03-26 07:30:03] 2026-03-26 06:29:19,098 | INFO     | sizes: {0: 2280324, 11: 2280324, 3851: 2306204, 3852: 2315226, 3855: 2315282, 3857: 2315504}
[2026-03-26 07:30:03] 2026-03-26 06:29:19,098 | INFO     | --------------------------------------------------
[2026-03-26 07:30:03] 2026-03-26 06:29:19,098 | INFO     | 
[2026-03-26 07:30:03] 2026-03-26 06:29:19,098 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/1
[2026-03-26 07:30:03] 2026-03-26 06:29:19,113 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,114 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 07:30:03] 2026-03-26 06:29:19,116 | INFO     | job 7060420007 has completed (purged errors)
[2026-03-26 07:30:03] 2026-03-26 06:29:19,116 | INFO     | overall cleanup function is called
[2026-03-26 07:30:03] 2026-03-26 06:29:20,123 | INFO     | --- collectZombieJob: --- 10, [3404791]
[2026-03-26 07:30:03] 2026-03-26 06:29:20,124 | INFO     | zombie collector waiting for pid 3404791
[2026-03-26 07:30:03] 2026-03-26 06:29:20,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 07:30:03] 2026-03-26 06:29:20,124 | INFO     | collected zombie processes
[2026-03-26 07:30:03] 2026-03-26 06:29:20,124 | INFO     | will attempt to kill all subprocesses of pid=3404791
[2026-03-26 07:30:03] 2026-03-26 06:29:20,464 | INFO     | process IDs to be killed: [3404791] (in reverse order)
[2026-03-26 07:30:03] 2026-03-26 06:29:20,613 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 07:30:03] 2026-03-26 06:29:20,613 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 07:30:03] 2026-03-26 06:29:20,639 | INFO     | did not find any defunct processes belonging to 3404791
[2026-03-26 07:30:03] 2026-03-26 06:29:20,662 | INFO     | did not find any defunct processes belonging to 3404791
[2026-03-26 07:30:03] 2026-03-26 06:29:20,662 | INFO     | ready for new job
[2026-03-26 07:30:03] 2026-03-26 06:29:20,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 07:30:03] 2026-03-26 06:29:20,664 | INFO     | **************************************
[2026-03-26 07:30:03] 2026-03-26 06:29:20,664 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 07:30:03] 2026-03-26 06:29:20,664 | INFO     | **************************************
[2026-03-26 07:30:03] 2026-03-26 06:29:20,664 | INFO     | 
[2026-03-26 07:30:03] 2026-03-26 06:29:20,671 | INFO     | architecture information:
[2026-03-26 07:30:03] 2026-03-26 06:29:20,671 | INFO     | executing command: cat /etc/os-release
[2026-03-26 07:30:03] 2026-03-26 06:29:20,682 | INFO     | cat /etc/os-release:
[2026-03-26 07:30:03] NAME="CentOS Linux"
[2026-03-26 07:30:03] VERSION="7 (Core)"
[2026-03-26 07:30:03] ID="centos"
[2026-03-26 07:30:03] ID_LIKE="rhel fedora"
[2026-03-26 07:30:03] VERSION_ID="7"
[2026-03-26 07:30:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 07:30:03] ANSI_COLOR="0;31"
[2026-03-26 07:30:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 07:30:03] HOME_URL="https://www.centos.org/"
[2026-03-26 07:30:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 07:30:03] 
[2026-03-26 07:30:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 07:30:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 07:30:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 07:30:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 07:30:03] 
[2026-03-26 07:30:03] 2026-03-26 06:29:20,683 | INFO     | **************************************
[2026-03-26 07:30:03] 2026-03-26 06:29:21,186 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/1
[2026-03-26 07:30:03] 2026-03-26 06:29:21,201 | INFO     | sufficient remaining disk space (133988089856 B)
[2026-03-26 07:30:03] 2026-03-26 06:29:21,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 07:30:03] 2026-03-26 06:29:21,202 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 07:30:03] 2026-03-26 06:29:21,202 | INFO     | update_server=False
[2026-03-26 07:30:03] 2026-03-26 06:29:21,202 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 07:30:03] 2026-03-26 06:29:21,202 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 07:30:03] 2026-03-26 06:29:21,202 | INFO     | aborting loop
[2026-03-26 07:30:03] 2026-03-26 06:29:21,872 | INFO     | all data control threads have been joined
[2026-03-26 07:30:03] 2026-03-26 06:29:22,206 | INFO     | [job] retrieve thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:22,208 | INFO     | [job] job monitor thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:22,224 | INFO     | all payload control threads have been joined
[2026-03-26 07:30:03] 2026-03-26 06:29:22,339 | INFO     | all job control threads have been joined
[2026-03-26 07:30:03] 2026-03-26 06:29:22,524 | INFO     | [payload] validate_post thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:22,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 07:30:03] 2026-03-26 06:29:22,877 | INFO     | [data] control thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:22,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 07:30:03] 2026-03-26 06:29:23,037 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:23,133 | INFO     | [job] validate thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:23,212 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:23,229 | INFO     | [payload] failed_post thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:23,230 | INFO     | [payload] control thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:23,344 | INFO     | [job] control thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:23,360 | INFO     | [data] copytool_in thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:23,474 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:24,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 07:30:03] 2026-03-26 06:29:24,559 | INFO     | [data] copytool_out thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:25,110 | INFO     | [job] queue monitor thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:26,939 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:31,638 | INFO     | job.realtimelogging is not enabled
[2026-03-26 07:30:03] 2026-03-26 06:29:32,643 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 07:30:03] 2026-03-26 06:29:52,182 | INFO     | PID=3396506 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-26 07:30:03] 2026-03-26 06:29:52,182 | INFO     | .. there are 11 such processes running
[2026-03-26 07:30:03] 2026-03-26 06:29:52,182 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 07:30:03] 2026-03-26 06:29:52,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 07:30:03] 2026-03-26 06:29:52,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 07:30:03] 2026-03-26 06:29:56,298 | INFO     | [monitor] cgroup control has ended
[2026-03-26 07:30:03] 2026-03-26 06:29:58,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22905249040192)>', '<ExcThread(monitor, started 22905007380224)>']
[2026-03-26 07:30:03] 2026-03-26 06:29:59,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 07:30:03] 2026-03-26 06:29:59,216 | INFO     | [monitor] control thread has ended
[2026-03-26 07:30:03] 2026-03-26 06:30:03,362 | INFO     | all workflow threads have been joined
[2026-03-26 07:30:03] 2026-03-26 06:30:03,362 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 07:30:03] 2026-03-26 06:30:03,362 | INFO     | traces error code: 0
[2026-03-26 07:30:03] 2026-03-26 06:30:03,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 07:30:03] 2026-03-26 06:30:03,463 [wrapper] ==== pilot stdout END ====
[2026-03-26 07:30:03] 2026-03-26 06:30:03,466 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 07:30:03] 2026-03-26 06:30:03,468 [wrapper] pilotpid: 3396506
[2026-03-26 07:30:03] 2026-03-26 06:30:03,470 [wrapper] Pilot exit status: 0
[2026-03-26 07:30:03] 2026-03-26 06:30:03,478 [wrapper] pandaids: 7060420007
[2026-03-26 07:30:03] 2026-03-26 06:30:03,585 [wrapper] cleanup supervisor_pilot 3666351 3396507
[2026-03-26 07:30:03] 2026-03-26 06:30:03,587 [wrapper] Test setup, not cleaning
[2026-03-26 07:30:03] 2026-03-26 06:30:03,593 [wrapper] apfmon messages muted
[2026-03-26 07:30:03] 2026-03-26 06:30:03,595 [wrapper] ==== wrapper stdout END ====
[2026-03-26 07:30:03] 2026-03-26 06:30:03,597 [wrapper] ==== wrapper stderr END ====
[2026-03-26 07:30:03]  *** Error codes and diagnostics ***
[2026-03-26 07:30:03]     "exeErrorCode": 0,
[2026-03-26 07:30:03]     "exeErrorDiag": "",
[2026-03-26 07:30:03]     "pilotErrorCode": 0,
[2026-03-26 07:30:03]     "pilotErrorDiag": "",
[2026-03-26 07:30:03]  *** Listing of results directory ***
[2026-03-26 07:30:03] total 488480
[2026-03-26 07:30:03] -rwx------. 1 boinc boinc     36322 Mar 22 05:30 runpilot2-wrapper.sh
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc    585013 Mar 23 21:52 pilot3.tar.gz
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc      5111 Mar 23 22:23 queuedata.json
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc       100 Mar 26 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 07:30:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar 26 05:43 run_atlas
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc       105 Mar 26 05:43 job.xml
[2026-03-26 07:30:03] -rw-r--r--. 2 boinc boinc 243383972 Mar 26 06:24 EVNT.49134059._000020.pool.root.1
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc      6712 Mar 26 06:24 init_data.xml
[2026-03-26 07:30:03] -rw-r--r--. 2 boinc boinc     15845 Mar 26 06:24 start_atlas.sh
[2026-03-26 07:30:03] drwxrwx--x. 2 boinc boinc      4096 Mar 26 06:24 shared
[2026-03-26 07:30:03] -rw-r--r--. 2 boinc boinc    597558 Mar 26 06:24 input.tar.gz
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc         0 Mar 26 06:24 boinc_lockfile
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc      2622 Mar 26 06:24 pandaJob.out
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc   1012182 Mar 26 06:24 agis_schedconf.cvmfs.json
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc   1511579 Mar 26 06:24 agis_ddmendpoints.agis.ALL.json
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc       445 Mar 26 06:24 workernode_map.json
[2026-03-26 07:30:03] drwx------. 5 boinc boinc      4096 Mar 26 06:24 pilot3
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc 250945932 Mar 26 07:28 HITS.49180885._000499.pool.root.1
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc       529 Mar 26 07:29 boinc_task_state.xml
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc      1027 Mar 26 07:29 memory_monitor_summary.json
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc        95 Mar 26 07:29 pilot_heartbeat.json
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc    377123 Mar 26 07:29 log.49180885._000499.job.log.tgz.1
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc      6349 Mar 26 07:29 heartbeat.json
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc      8192 Mar 26 07:30 boinc_mmap_file
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc        27 Mar 26 07:30 wrapper_checkpoint.txt
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc      4903 Mar 26 07:30 pilotlog.txt
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc    585187 Mar 26 07:30 log.49180885._000499.job.log.1
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc       357 Mar 26 07:30 output.list
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc       620 Mar 26 07:30 runtime_log
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc    983040 Mar 26 07:30 result.tar.gz
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc      9223 Mar 26 07:30 runtime_log.err
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc       661 Mar 26 07:30 Bg3LDmgdPO9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyx0LDm1OCpdn.diag
[2026-03-26 07:30:03] -rw-r--r--. 1 boinc boinc     22586 Mar 26 07:30 stderr.txt
[2026-03-26 07:30:03] HITS file was successfully produced:
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc 250945932 Mar 26 07:28 shared/HITS.pool.root.1
[2026-03-26 07:30:03]  *** Contents of shared directory: ***
[2026-03-26 07:30:03] total 484316
[2026-03-26 07:30:03] -rw-r--r--. 2 boinc boinc 243383972 Mar 26 06:24 ATLAS.root_0
[2026-03-26 07:30:03] -rw-r--r--. 2 boinc boinc     15845 Mar 26 06:24 start_atlas.sh
[2026-03-26 07:30:03] -rw-r--r--. 2 boinc boinc    597558 Mar 26 06:24 input.tar.gz
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc 250945932 Mar 26 07:28 HITS.pool.root.1
[2026-03-26 07:30:03] -rw-------. 1 boinc boinc    983040 Mar 26 07:30 result.tar.gz
07:30:05 (3387371): run_atlas exited; CPU time 42960.398315
07:30:05 (3387371): called boinc_finish(0)

</stderr_txt>
]]>

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