Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:20:34 (1519977): wrapper (7.7.26015): starting
05:20:34 (1519977): wrapper: running run_atlas (--nthreads 12)
[2026-03-25 05:20:34] Arguments: --nthreads 12
[2026-03-25 05:20:34] Threads: 12
[2026-03-25 05:20:34] Checking for CVMFS
[2026-03-25 05:20:34] No cvmfs_config command found, will try listing directly
[2026-03-25 05:20:34] CVMFS is ok
[2026-03-25 05:20:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 05:20:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 05:20:34] Further information can be found at the LHC@home message board.
[2026-03-25 05:20:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 05:20:34] Checking for apptainer binary...
[2026-03-25 05:20:34] which: no apptainer in ((null))
[2026-03-25 05:20:34] apptainer is not installed, using version from CVMFS
[2026-03-25 05:20:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 05:20:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-25 05:20:34] apptainer works
[2026-03-25 05:20:34] Set ATHENA_PROC_NUMBER=12
[2026-03-25 05:20:34] Set ATHENA_CORE_NUMBER=12
[2026-03-25 05:20:34] Starting ATLAS job with PandaID=7063546192
[2026-03-25 05:20:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 06:12:57]  *** The last 200 lines of the pilot log: ***
[2026-03-25 06:12:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-25 06:12:57]  is_altstaged=None
[2026-03-25 06:12:57]  is_tar=False
[2026-03-25 06:12:57]  lfn=log.49191803._000006.job.log.tgz.1
[2026-03-25 06:12:57]  mtime=0
[2026-03-25 06:12:57]  protocol_id=None
[2026-03-25 06:12:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-25 06:12:57]  replicas=None
[2026-03-25 06:12:57]  scope=mc23_13p6TeV
[2026-03-25 06:12:57]  status=None
[2026-03-25 06:12:57]  status_code=0
[2026-03-25 06:12:57]  storage_token=
[2026-03-25 06:12:57]  surl=/var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063546192/log.49191803._000006.job.log.tgz.1
[2026-03-25 06:12:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/b6/log.49191803._000006.job.log.tgz.1
[2026-03-25 06:12:57]  workdir=None
[2026-03-25 06:12:57] ]
[2026-03-25 06:12:57] 2026-03-25 05:12:03,761 | INFO     | transferring file log.49191803._000006.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063546192/log.49191803._000006.job.log.tgz.1 to /var/lib/
[2026-03-25 06:12:57] 2026-03-25 05:12:03,761 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063546192/log.49191803._000006.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/1/
[2026-03-25 06:12:57] 2026-03-25 05:12:03,775 | INFO     | adding to output.list: log.49191803._000006.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/b6/log.49191803._000006.job.log.tg
[2026-03-25 06:12:57] 2026-03-25 05:12:03,776 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-25 06:12:57] 2026-03-25 05:12:03,776 | INFO     | summary of transferred files:
[2026-03-25 06:12:57] 2026-03-25 05:12:03,776 | INFO     |  -- lfn=log.49191803._000006.job.log.tgz.1, status_code=0, status=transferred
[2026-03-25 06:12:57] 2026-03-25 05:12:03,776 | INFO     | stage-out finished correctly
[2026-03-25 06:12:57] 2026-03-25 05:12:04,186 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-25 06:12:57] 2026-03-25 05:12:04,791 | INFO     | job 7063546192 has state=finished
[2026-03-25 06:12:57] 2026-03-25 05:12:04,791 | INFO     | preparing for final server update for job 7063546192 in state='finished'
[2026-03-25 06:12:57] 2026-03-25 05:12:04,791 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063546192/jobReport.json
[2026-03-25 06:12:57] 2026-03-25 05:12:04,793 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/1/workernode_map.json
[2026-03-25 06:12:57] 2026-03-25 05:12:04,793 | INFO     | this job has now completed (state=finished)
[2026-03-25 06:12:57] 2026-03-25 05:12:04,793 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 06:12:57] 2026-03-25 05:12:04,793 | INFO     | log transfer has been attempted: DONE
[2026-03-25 06:12:57] 2026-03-25 05:12:04,793 | INFO     | job 7063546192 has finished - writing final server update
[2026-03-25 06:12:57] 2026-03-25 05:12:04,793 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2330363/.job.ad'
[2026-03-25 06:12:57] 2026-03-25 05:12:04,793 | INFO     | total number of processed events: 400 (read)
[2026-03-25 06:12:57] 2026-03-25 05:12:04,810 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063546192/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 06:12:57] 2026-03-25 05:12:04,810 | INFO     | extracted standard info from prmon json
[2026-03-25 06:12:57] 2026-03-25 05:12:04,810 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 06:12:57] 2026-03-25 05:12:04,810 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 06:12:57] 2026-03-25 05:12:04,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 06:12:57] 2026-03-25 05:12:04,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 06:12:57] 2026-03-25 05:12:04,811 | INFO     | fitting pss+swap vs Time
[2026-03-25 06:12:57] 2026-03-25 05:12:04,811 | INFO     | sum of square deviations: 26400495.0
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | sum of deviations: -471413276.49999994
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | mean x: 1774414084.5
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | mean y: 2775625.159090909
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | intersect: 31687119325.604584
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | chi2: 0.0006438855786687961
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | current memory leak: -17.86 B/s (using 44 data points, chi2=0.00)
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | could have reported an average CPU frequency of 3649 MHz (5 samples)
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | ..............................
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | . Timing measurements:
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | . get job = 0 s
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | . initial setup = 4 s
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | . payload setup = 6 s
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | . stage-in = 0 s
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | . payload execution = 3055 s
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | . stage-out = 0 s
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | . log creation = 0 s
[2026-03-25 06:12:57] 2026-03-25 05:12:04,812 | INFO     | ..............................
[2026-03-25 06:12:57] 2026-03-25 05:12:05,228 | INFO     | 
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | job summary report
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | --------------------------------------------------
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | PanDA job id: 7063546192
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | task id: 49191803
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | errors: (none)
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | pilot state: finished 
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | transexitcode: 0
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | exeerrorcode: 0
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | exeerrordiag: 
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | exitcode: 0
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | exitmsg: OK
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | cpuconsumptiontime: 33162 s
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | nevents: 400
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | neventsw: 0
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | pid: 1539427
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | pgrp: 1539427
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | corecount: 12
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | event service: False
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | sizes: {0: 2280291, 11: 2280291, 3065: 2305755, 3067: 2314833, 3068: 2315003}
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | --------------------------------------------------
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | 
[2026-03-25 06:12:57] 2026-03-25 05:12:05,229 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/1
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,249 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 06:12:57] 2026-03-25 05:12:05,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,249 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 06:12:57] 2026-03-25 05:12:05,249 | INFO     | job 7063546192 has completed (purged errors)
[2026-03-25 06:12:57] 2026-03-25 05:12:05,249 | INFO     | overall cleanup function is called
[2026-03-25 06:12:57] 2026-03-25 05:12:06,256 | INFO     | --- collectZombieJob: --- 10, [1539427]
[2026-03-25 06:12:57] 2026-03-25 05:12:06,256 | INFO     | zombie collector waiting for pid 1539427
[2026-03-25 06:12:57] 2026-03-25 05:12:06,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 06:12:57] 2026-03-25 05:12:06,256 | INFO     | collected zombie processes
[2026-03-25 06:12:57] 2026-03-25 05:12:06,256 | INFO     | will attempt to kill all subprocesses of pid=1539427
[2026-03-25 06:12:57] 2026-03-25 05:12:06,626 | INFO     | process IDs to be killed: [1539427] (in reverse order)
[2026-03-25 06:12:57] 2026-03-25 05:12:06,767 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 06:12:57] 2026-03-25 05:12:06,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 06:12:57] 2026-03-25 05:12:06,789 | INFO     | did not find any defunct processes belonging to 1539427
[2026-03-25 06:12:57] 2026-03-25 05:12:06,806 | INFO     | did not find any defunct processes belonging to 1539427
[2026-03-25 06:12:57] 2026-03-25 05:12:06,806 | INFO     | ready for new job
[2026-03-25 06:12:57] 2026-03-25 05:12:06,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 06:12:57] 2026-03-25 05:12:06,807 | INFO     | **************************************
[2026-03-25 06:12:57] 2026-03-25 05:12:06,807 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 06:12:57] 2026-03-25 05:12:06,807 | INFO     | **************************************
[2026-03-25 06:12:57] 2026-03-25 05:12:06,807 | INFO     | 
[2026-03-25 06:12:57] 2026-03-25 05:12:06,812 | INFO     | architecture information:
[2026-03-25 06:12:57] 2026-03-25 05:12:06,812 | INFO     | executing command: cat /etc/os-release
[2026-03-25 06:12:57] 2026-03-25 05:12:06,825 | INFO     | cat /etc/os-release:
[2026-03-25 06:12:57] NAME="CentOS Linux"
[2026-03-25 06:12:57] VERSION="7 (Core)"
[2026-03-25 06:12:57] ID="centos"
[2026-03-25 06:12:57] ID_LIKE="rhel fedora"
[2026-03-25 06:12:57] VERSION_ID="7"
[2026-03-25 06:12:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 06:12:57] ANSI_COLOR="0;31"
[2026-03-25 06:12:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 06:12:57] HOME_URL="https://www.centos.org/"
[2026-03-25 06:12:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 06:12:57] 
[2026-03-25 06:12:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 06:12:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 06:12:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 06:12:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 06:12:57] 
[2026-03-25 06:12:57] 2026-03-25 05:12:06,825 | INFO     | **************************************
[2026-03-25 06:12:57] 2026-03-25 05:12:07,328 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/1
[2026-03-25 06:12:57] 2026-03-25 05:12:07,342 | INFO     | sufficient remaining disk space (19821232128 B)
[2026-03-25 06:12:57] 2026-03-25 05:12:07,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 06:12:57] 2026-03-25 05:12:07,342 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 06:12:57] 2026-03-25 05:12:07,342 | INFO     | update_server=False
[2026-03-25 06:12:57] 2026-03-25 05:12:07,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 06:12:57] 2026-03-25 05:12:07,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 06:12:57] 2026-03-25 05:12:07,890 | WARNING  | process 1539427 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 06:12:57] 2026-03-25 05:12:07,934 | INFO     | all data control threads have been joined
[2026-03-25 06:12:57] 2026-03-25 05:12:07,939 | INFO     | all payload control threads have been joined
[2026-03-25 06:12:57] 2026-03-25 05:12:08,135 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 06:12:57] 2026-03-25 05:12:08,136 | INFO     | all job control threads have been joined
[2026-03-25 06:12:57] 2026-03-25 05:12:08,335 | INFO     | job.realtimelogging is not enabled
[2026-03-25 06:12:57] 2026-03-25 05:12:08,348 | INFO     | [job] retrieve thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:08,448 | INFO     | number of running child processes to parent process 1539427: 1
[2026-03-25 06:12:57] 2026-03-25 05:12:08,448 | INFO     | maximum number of monitored processes: 6
[2026-03-25 06:12:57] 2026-03-25 05:12:08,448 | INFO     | aborting job monitoring since job object (job id=7063546192) has expired
[2026-03-25 06:12:57] 2026-03-25 05:12:08,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 06:12:57] 2026-03-25 05:12:08,448 | INFO     | will abort loop
[2026-03-25 06:12:57] 2026-03-25 05:12:08,940 | INFO     | [data] control thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:08,944 | INFO     | [payload] control thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,142 | INFO     | [job] control thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,179 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,340 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,348 | INFO     | [data] copytool_out thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,356 | INFO     | [job] validate thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,430 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,453 | INFO     | [job] job monitor thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,587 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,632 | INFO     | [payload] validate_post thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,774 | INFO     | [payload] failed_post thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,810 | INFO     | [data] copytool_in thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:09,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 06:12:57] 2026-03-25 05:12:10,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 06:12:57] 2026-03-25 05:12:10,868 | INFO     | [job] queue monitor thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:14,247 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 06:12:57] 2026-03-25 05:12:37,112 | INFO     | PID=1526843 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 06:12:57] 2026-03-25 05:12:37,113 | INFO     | .. there are 14 such processes running
[2026-03-25 06:12:57] 2026-03-25 05:12:37,113 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 06:12:57] 2026-03-25 05:12:37,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 06:12:57] 2026-03-25 05:12:37,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 06:12:57] 2026-03-25 05:12:50,746 | INFO     | [monitor] cgroup control has ended
[2026-03-25 06:12:57] 2026-03-25 05:12:51,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22623656048448)>', '<ExcThread(monitor, started 22623414392576)>']
[2026-03-25 06:12:57] 2026-03-25 05:12:52,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 06:12:57] 2026-03-25 05:12:52,188 | INFO     | [monitor] control thread has ended
[2026-03-25 06:12:57] 2026-03-25 05:12:57,016 | INFO     | all workflow threads have been joined
[2026-03-25 06:12:57] 2026-03-25 05:12:57,016 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 06:12:57] 2026-03-25 05:12:57,016 | INFO     | traces error code: 0
[2026-03-25 06:12:57] 2026-03-25 05:12:57,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 06:12:57] 2026-03-25 05:12:57,176 [wrapper] ==== pilot stdout END ====
[2026-03-25 06:12:57] 2026-03-25 05:12:57,178 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 06:12:57] 2026-03-25 05:12:57,181 [wrapper] pilotpid: 1526843
[2026-03-25 06:12:57] 2026-03-25 05:12:57,183 [wrapper] Pilot exit status: 0
[2026-03-25 06:12:57] 2026-03-25 05:12:57,191 [wrapper] pandaids: 7063546192
[2026-03-25 06:12:57] 2026-03-25 05:12:57,291 [wrapper] cleanup supervisor_pilot 1726406 1526845
[2026-03-25 06:12:57] 2026-03-25 05:12:57,293 [wrapper] Test setup, not cleaning
[2026-03-25 06:12:57] 2026-03-25 05:12:57,296 [wrapper] apfmon messages muted
[2026-03-25 06:12:57] 2026-03-25 05:12:57,298 [wrapper] ==== wrapper stdout END ====
[2026-03-25 06:12:57] 2026-03-25 05:12:57,300 [wrapper] ==== wrapper stderr END ====
[2026-03-25 06:12:57]  *** Error codes and diagnostics ***
[2026-03-25 06:12:57]     "exeErrorCode": 0,
[2026-03-25 06:12:57]     "exeErrorDiag": "",
[2026-03-25 06:12:57]     "pilotErrorCode": 0,
[2026-03-25 06:12:57]     "pilotErrorDiag": "",
[2026-03-25 06:12:57]  *** Listing of results directory ***
[2026-03-25 06:12:57] total 465196
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc    585013 Mar 23 21:52 pilot3.tar.gz
[2026-03-25 06:12:57] -rwx------. 1 boinc boinc     36322 Mar 23 21:54 runpilot2-wrapper.sh
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc      5111 Mar 23 21:55 queuedata.json
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc       100 Mar 25 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 06:12:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar 25 05:20 run_atlas
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc       105 Mar 25 05:20 job.xml
[2026-03-25 06:12:57] -rw-r--r--. 2 boinc boinc 249678731 Mar 25 05:20 EVNT.49128600._000001.pool.root.1
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc      6711 Mar 25 05:20 init_data.xml
[2026-03-25 06:12:57] -rw-r--r--. 2 boinc boinc     15845 Mar 25 05:20 start_atlas.sh
[2026-03-25 06:12:57] drwxrwx--x. 2 boinc boinc      4096 Mar 25 05:20 shared
[2026-03-25 06:12:57] -rw-r--r--. 2 boinc boinc    597538 Mar 25 05:20 input.tar.gz
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc         0 Mar 25 05:20 boinc_lockfile
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc      2599 Mar 25 05:20 pandaJob.out
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc   1010836 Mar 25 05:20 agis_schedconf.cvmfs.json
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc   1511579 Mar 25 05:20 agis_ddmendpoints.agis.ALL.json
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc       440 Mar 25 05:20 workernode_map.json
[2026-03-25 06:12:57] drwx------. 5 boinc boinc      4096 Mar 25 05:20 pilot3
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc       529 Mar 25 06:11 boinc_task_state.xml
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc 221077367 Mar 25 06:11 HITS.49191803._000006.pool.root.1
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc        95 Mar 25 06:11 pilot_heartbeat.json
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc      1031 Mar 25 06:11 memory_monitor_summary.json
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc    356235 Mar 25 06:12 log.49191803._000006.job.log.tgz.1
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc      6344 Mar 25 06:12 heartbeat.json
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc      8192 Mar 25 06:12 boinc_mmap_file
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc        27 Mar 25 06:12 wrapper_checkpoint.txt
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc      5435 Mar 25 06:12 pilotlog.txt
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc    477113 Mar 25 06:12 log.49191803._000006.job.log.1
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc       357 Mar 25 06:12 output.list
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc       620 Mar 25 06:12 runtime_log
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc    849920 Mar 25 06:12 result.tar.gz
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc      9223 Mar 25 06:12 runtime_log.err
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc       662 Mar 25 06:12 gMhMDmzS1O9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfTBMDmAe2QBo.diag
[2026-03-25 06:12:57] -rw-r--r--. 1 boinc boinc     21313 Mar 25 06:12 stderr.txt
[2026-03-25 06:12:57] HITS file was successfully produced:
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc 221077367 Mar 25 06:11 shared/HITS.pool.root.1
[2026-03-25 06:12:57]  *** Contents of shared directory: ***
[2026-03-25 06:12:57] total 461164
[2026-03-25 06:12:57] -rw-r--r--. 2 boinc boinc 249678731 Mar 25 05:20 ATLAS.root_0
[2026-03-25 06:12:57] -rw-r--r--. 2 boinc boinc     15845 Mar 25 05:20 start_atlas.sh
[2026-03-25 06:12:57] -rw-r--r--. 2 boinc boinc    597538 Mar 25 05:20 input.tar.gz
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc 221077367 Mar 25 06:11 HITS.pool.root.1
[2026-03-25 06:12:57] -rw-------. 1 boinc boinc    849920 Mar 25 06:12 result.tar.gz
06:12:58 (1519977): run_atlas exited; CPU time 33264.210769
06:12:58 (1519977): called boinc_finish(0)

</stderr_txt>
]]>

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