Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:56 (2301317): wrapper (7.7.26015): starting
00:02:56 (2301317): wrapper: running run_atlas (--nthreads 9)
[2026-03-24 00:02:56] Arguments: --nthreads 9
[2026-03-24 00:02:56] Threads: 9
[2026-03-24 00:02:56] Checking for CVMFS
[2026-03-24 00:02:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 00:02:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 00:02:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 00:02:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 00:02:58] 2.13.3.0 11754 199419 548872 157629 2 688 25809701 32935936 52109 16776704 0 1251861859 99.587 1374634316 23849 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-24 00:02:58] CVMFS is ok
[2026-03-24 00:02:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 00:02:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 00:02:58] Further information can be found at the LHC@home message board.
[2026-03-24 00:02:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 00:02:58] Checking for apptainer binary...
[2026-03-24 00:02:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 00:02:58] Running /usr/bin/apptainer --version
[2026-03-24 00:02:58] apptainer version 1.4.5-2.el9
[2026-03-24 00:02:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 00:02:58] c7-2-38.aglt2.org
[2026-03-24 00:02:58] apptainer works
[2026-03-24 00:02:58] Set ATHENA_PROC_NUMBER=9
[2026-03-24 00:02:58] Set ATHENA_CORE_NUMBER=9
[2026-03-24 00:02:58] Starting ATLAS job with PandaID=7056979887
[2026-03-24 00:02:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:37 (2301317): BOINC client no longer exists - exiting
00:20:37 (2301317): timer handler: client dead, exiting
00:21:35 (2501078): wrapper (7.7.26015): starting
00:21:35 (2501078): wrapper: running run_atlas (--nthreads 11)
[2026-03-24 00:21:35] Arguments: --nthreads 11
[2026-03-24 00:21:35] Threads: 11
[2026-03-24 00:21:35] This job has been restarted, cleaning up previous attempt
[2026-03-24 00:21:35] Checking for CVMFS
[2026-03-24 00:21:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 00:21:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 00:21:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 00:21:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 00:21:36] 2.13.3.0 11754 199438 538508 157631 0 428 25880168 32935936 49260 16776704 0 1252232397 99.587 1374648741 23849 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-24 00:21:36] CVMFS is ok
[2026-03-24 00:21:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 00:21:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 00:21:36] Further information can be found at the LHC@home message board.
[2026-03-24 00:21:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 00:21:36] Checking for apptainer binary...
[2026-03-24 00:21:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 00:21:36] Running /usr/bin/apptainer --version
[2026-03-24 00:21:36] apptainer version 1.4.5-2.el9
[2026-03-24 00:21:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 00:21:36] c7-2-38.aglt2.org
[2026-03-24 00:21:36] apptainer works
[2026-03-24 00:21:36] Set ATHENA_PROC_NUMBER=11
[2026-03-24 00:21:36] Set ATHENA_CORE_NUMBER=11
[2026-03-24 00:21:37] Starting ATLAS job with PandaID=7056979887
[2026-03-24 00:21:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 20:18:03]  *** The last 200 lines of the pilot log: ***
[2026-03-24 20:18:03] 2026-03-25 00:17:13,346 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 20:18:03] 2026-03-25 00:17:13,346 | INFO     | log transfer has been attempted: DONE
[2026-03-24 20:18:03] 2026-03-25 00:17:13,346 | INFO     | job 7056979887 has finished - writing final server update
[2026-03-24 20:18:03] 2026-03-25 00:17:13,346 | INFO     | total number of processed events: 400 (read)
[2026-03-24 20:18:03] 2026-03-25 00:17:13,579 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7056979887/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 20:18:03] 2026-03-25 00:17:13,579 | INFO     | extracted standard info from prmon json
[2026-03-24 20:18:03] 2026-03-25 00:17:13,579 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 20:18:03] 2026-03-25 00:17:13,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 20:18:03] 2026-03-25 00:17:13,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 20:18:03] 2026-03-25 00:17:13,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 20:18:03] 2026-03-25 00:17:14,030 | INFO     | fitting pss+swap vs Time
[2026-03-24 20:18:03] 2026-03-25 00:17:14,032 | INFO     | sum of square deviations: 503027169703.65186
[2026-03-24 20:18:03] 2026-03-25 00:17:14,618 | INFO     | sum of deviations: 1447613861546.9038
[2026-03-24 20:18:03] 2026-03-25 00:17:14,678 | INFO     | mean x: 1774361976.0170212
[2026-03-24 20:18:03] 2026-03-25 00:17:14,678 | INFO     | mean y: 2617901.154893617
[2026-03-24 20:18:03] 2026-03-25 00:17:14,679 | INFO     | intersect: -5103649009.630914
[2026-03-24 20:18:03] 2026-03-25 00:17:14,680 | INFO     | chi2: 2.620315096129304
[2026-03-24 20:18:03] 2026-03-25 00:17:14,681 | INFO     | sum of square deviations: 496632832656.15765
[2026-03-24 20:18:03] 2026-03-25 00:17:14,982 | INFO     | sum of deviations: 1437321475382.168
[2026-03-24 20:18:03] 2026-03-25 00:17:14,982 | INFO     | mean x: 1774361823.5170941
[2026-03-24 20:18:03] 2026-03-25 00:17:14,982 | INFO     | mean y: 2617655.7666666666
[2026-03-24 20:18:03] 2026-03-25 00:17:15,000 | INFO     | intersect: -5132621471.295028
[2026-03-24 20:18:03] 2026-03-25 00:17:15,001 | INFO     | chi2: 2.6193111113947274
[2026-03-24 20:18:03] 2026-03-25 00:17:15,001 | INFO     | current chi2=2.6193111113947274 (change=0.038315420006528475 %)
[2026-03-24 20:18:03] 2026-03-25 00:17:15,001 | INFO     | right removable region: 1169
[2026-03-24 20:18:03] 2026-03-25 00:17:15,002 | INFO     | sum of square deviations: 496632820456.15765
[2026-03-24 20:18:03] 2026-03-25 00:17:15,462 | INFO     | sum of deviations: 1224799734390.3804
[2026-03-24 20:18:03] 2026-03-25 00:17:15,463 | INFO     | mean x: 1774362128.5170941
[2026-03-24 20:18:03] 2026-03-25 00:17:15,463 | INFO     | mean y: 2623207.005982906
[2026-03-24 20:18:03] 2026-03-25 00:17:15,463 | INFO     | intersect: -4373322510.242356
[2026-03-24 20:18:03] 2026-03-25 00:17:15,464 | INFO     | chi2: 1.0250283408055514
[2026-03-24 20:18:03] 2026-03-25 00:17:15,464 | INFO     | current chi2=1.0250283408055514 (change=60.881485500743395 %)
[2026-03-24 20:18:03] 2026-03-25 00:17:15,527 | INFO     | sum of square deviations: 490292890833.6569
[2026-03-24 20:18:03] 2026-03-25 00:17:15,745 | INFO     | sum of deviations: 1146192724619.5342
[2026-03-24 20:18:03] 2026-03-25 00:17:15,746 | INFO     | mean x: 1774362281.0171673
[2026-03-24 20:18:03] 2026-03-25 00:17:15,746 | INFO     | mean y: 2625097.823175966
[2026-03-24 20:18:03] 2026-03-25 00:17:15,746 | INFO     | intersect: -4145428392.9854407
[2026-03-24 20:18:03] 2026-03-25 00:17:15,747 | INFO     | chi2: 0.9236626975842404
[2026-03-24 20:18:03] 2026-03-25 00:17:15,747 | INFO     | current chi2=0.9236626975842404 (change=9.88905761782641 %)
[2026-03-24 20:18:03] 2026-03-25 00:17:15,747 | INFO     | left removable region: 20
[2026-03-24 20:18:03] 2026-03-25 00:17:15,752 | INFO     | sum of square deviations: 470368121673.6502
[2026-03-24 20:18:03] 2026-03-25 00:17:15,824 | INFO     | sum of deviations: 979346226107.8015
[2026-03-24 20:18:03] 2026-03-25 00:17:15,827 | INFO     | mean x: 1774362403.0174065
[2026-03-24 20:18:03] 2026-03-25 00:17:15,827 | INFO     | mean y: 2628691.3098346386
[2026-03-24 20:18:03] 2026-03-25 00:17:15,827 | INFO     | intersect: -3691743956.563452
[2026-03-24 20:18:03] 2026-03-25 00:17:15,829 | INFO     | chi2: 0.710918524427397
[2026-03-24 20:18:03] 2026-03-25 00:17:15,829 | INFO     | current memory leak: 2.08 B/s (using 1149 data points, chi2=0.71)
[2026-03-24 20:18:03] 2026-03-25 00:17:15,831 | INFO     | could have reported an average CPU frequency of 3324 MHz (43 samples)
[2026-03-24 20:18:03] 2026-03-25 00:17:15,831 | INFO     | ..............................
[2026-03-24 20:18:03] 2026-03-25 00:17:15,832 | INFO     | . Timing measurements:
[2026-03-24 20:18:03] 2026-03-25 00:17:15,832 | INFO     | . get job = 0 s
[2026-03-24 20:18:03] 2026-03-25 00:17:15,832 | INFO     | . initial setup = 1 s
[2026-03-24 20:18:03] 2026-03-25 00:17:15,832 | INFO     | . payload setup = 21 s
[2026-03-24 20:18:03] 2026-03-25 00:17:15,832 | INFO     | . stage-in = 0 s
[2026-03-24 20:18:03] 2026-03-25 00:17:15,832 | INFO     | . payload execution = 71660 s
[2026-03-24 20:18:03] 2026-03-25 00:17:15,832 | INFO     | . stage-out = 6 s
[2026-03-24 20:18:03] 2026-03-25 00:17:15,832 | INFO     | . log creation = 0 s
[2026-03-24 20:18:03] 2026-03-25 00:17:15,832 | INFO     | ..............................
[2026-03-24 20:18:03] 2026-03-25 00:17:15,927 | WARNING  | process 2561833 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 20:18:03] 2026-03-25 00:17:15,930 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7056979887/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 20:18:03] 2026-03-25 00:17:16,320 | INFO     | 
[2026-03-24 20:18:03] 2026-03-25 00:17:16,320 | INFO     | job summary report
[2026-03-24 20:18:03] 2026-03-25 00:17:16,320 | INFO     | --------------------------------------------------
[2026-03-24 20:18:03] 2026-03-25 00:17:16,320 | INFO     | PanDA job id: 7056979887
[2026-03-24 20:18:03] 2026-03-25 00:17:16,320 | INFO     | task id: 49182169
[2026-03-24 20:18:03] 2026-03-25 00:17:16,320 | INFO     | errors: (none)
[2026-03-24 20:18:03] 2026-03-25 00:17:16,320 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 20:18:03] 2026-03-25 00:17:16,320 | INFO     | pilot state: finished 
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | transexitcode: 0
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | exeerrorcode: 0
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | exeerrordiag: 
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | exitcode: 0
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | exitmsg: OK
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | cpuconsumptiontime: 83325 s
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | nevents: 400
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | neventsw: 0
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | pid: 2561833
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | pgrp: 2561833
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | corecount: 11
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | event service: False
[2026-03-24 20:18:03] 2026-03-25 00:17:16,321 | INFO     | sizes: {0: 2279860, 1: 2280321, 11: 2280321, 71686: 2334432, 71696: 2343486, 71701: 2343624}
[2026-03-24 20:18:03] 2026-03-25 00:17:16,322 | INFO     | --------------------------------------------------
[2026-03-24 20:18:03] 2026-03-25 00:17:16,322 | INFO     | 
[2026-03-24 20:18:03] 2026-03-25 00:17:16,322 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-24 20:18:03] 2026-03-25 00:17:16,408 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,408 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,408 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,408 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 20:18:03] 2026-03-25 00:17:16,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,410 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 20:18:03] 2026-03-25 00:17:16,410 | INFO     | job 7056979887 has completed (purged errors)
[2026-03-24 20:18:03] 2026-03-25 00:17:16,410 | INFO     | overall cleanup function is called
[2026-03-24 20:18:03] 2026-03-25 00:17:17,484 | INFO     | --- collectZombieJob: --- 10, [2561833]
[2026-03-24 20:18:03] 2026-03-25 00:17:17,485 | INFO     | zombie collector waiting for pid 2561833
[2026-03-24 20:18:03] 2026-03-25 00:17:17,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 20:18:03] 2026-03-25 00:17:17,485 | INFO     | collected zombie processes
[2026-03-24 20:18:03] 2026-03-25 00:17:17,485 | INFO     | will attempt to kill all subprocesses of pid=2561833
[2026-03-24 20:18:03] 2026-03-25 00:17:21,290 | INFO     | PID=2530242 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-24 20:18:03] 2026-03-25 00:17:21,291 | INFO     | .. there are 67 such processes running
[2026-03-24 20:18:03] 2026-03-25 00:17:21,766 | INFO     | number of running child processes to parent process 2561833: 1
[2026-03-24 20:18:03] 2026-03-25 00:17:21,766 | INFO     | maximum number of monitored processes: 6
[2026-03-24 20:18:03] 2026-03-25 00:17:21,766 | INFO     | aborting job monitoring since job object (job id=7056979887) has expired
[2026-03-24 20:18:03] 2026-03-25 00:17:21,855 | INFO     | process IDs to be killed: [2561833] (in reverse order)
[2026-03-24 20:18:03] 2026-03-25 00:17:22,089 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 20:18:03] 2026-03-25 00:17:22,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 20:18:03] 2026-03-25 00:17:22,120 | INFO     | did not find any defunct processes belonging to 2561833
[2026-03-24 20:18:03] 2026-03-25 00:17:22,150 | INFO     | did not find any defunct processes belonging to 2561833
[2026-03-24 20:18:03] 2026-03-25 00:17:22,150 | INFO     | ready for new job
[2026-03-24 20:18:03] 2026-03-25 00:17:22,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 20:18:03] 2026-03-25 00:17:22,154 | INFO     | **************************************
[2026-03-24 20:18:03] 2026-03-25 00:17:22,154 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 20:18:03] 2026-03-25 00:17:22,155 | INFO     | **************************************
[2026-03-24 20:18:03] 2026-03-25 00:17:22,155 | INFO     | 
[2026-03-24 20:18:03] 2026-03-25 00:17:22,166 | INFO     | architecture information:
[2026-03-24 20:18:03] 2026-03-25 00:17:22,166 | INFO     | executing command: cat /etc/os-release
[2026-03-24 20:18:03] 2026-03-25 00:17:22,207 | INFO     | cat /etc/os-release:
[2026-03-24 20:18:03] NAME="CentOS Linux"
[2026-03-24 20:18:03] VERSION="7 (Core)"
[2026-03-24 20:18:03] ID="centos"
[2026-03-24 20:18:03] ID_LIKE="rhel fedora"
[2026-03-24 20:18:03] VERSION_ID="7"
[2026-03-24 20:18:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 20:18:03] ANSI_COLOR="0;31"
[2026-03-24 20:18:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 20:18:03] HOME_URL="https://www.centos.org/"
[2026-03-24 20:18:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 20:18:03] 
[2026-03-24 20:18:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 20:18:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 20:18:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 20:18:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 20:18:03] 
[2026-03-24 20:18:03] 2026-03-25 00:17:22,208 | INFO     | **************************************
[2026-03-24 20:18:03] 2026-03-25 00:17:22,731 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-24 20:18:03] 2026-03-25 00:17:22,788 | INFO     | sufficient remaining disk space (73852256256 B)
[2026-03-24 20:18:03] 2026-03-25 00:17:22,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 20:18:03] 2026-03-25 00:17:22,788 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 20:18:03] 2026-03-25 00:17:22,789 | INFO     | update_server=False
[2026-03-24 20:18:03] 2026-03-25 00:17:22,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 20:18:03] 2026-03-25 00:17:22,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 20:18:03] 2026-03-25 00:17:22,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 20:18:03] 2026-03-25 00:17:22,793 | INFO     | aborting loop
[2026-03-24 20:18:03] 2026-03-25 00:17:22,882 | INFO     | all payload control threads have been joined
[2026-03-24 20:18:03] 2026-03-25 00:17:23,402 | INFO     | all data control threads have been joined
[2026-03-24 20:18:03] 2026-03-25 00:17:23,797 | INFO     | [job] retrieve thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:23,799 | INFO     | [job] job monitor thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:23,890 | INFO     | [payload] control thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:24,004 | INFO     | [payload] validate_post thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:24,052 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:24,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 20:18:03] 2026-03-25 00:17:24,088 | INFO     | all job control threads have been joined
[2026-03-24 20:18:03] 2026-03-25 00:17:24,305 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:24,408 | INFO     | [data] control thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:24,509 | INFO     | [job] validate thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:24,513 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:24,693 | INFO     | [payload] failed_post thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:24,992 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:25,097 | INFO     | [job] control thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:25,178 | INFO     | [data] copytool_in thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:25,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 20:18:03] 2026-03-25 00:17:26,079 | INFO     | [data] copytool_out thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:26,417 | INFO     | [job] queue monitor thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:26,798 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 20:18:03] 2026-03-25 00:17:33,446 | INFO     | [monitor] cgroup control has ended
[2026-03-24 20:18:03] 2026-03-25 00:17:34,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740515432256)>', '<ExcThread(monitor, started 139740032521984)>']
[2026-03-24 20:18:03] 2026-03-25 00:17:39,728 | INFO     | all workflow threads have been joined
[2026-03-24 20:18:03] 2026-03-25 00:17:39,728 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 20:18:03] 2026-03-25 00:17:39,729 | INFO     | traces error code: 0
[2026-03-24 20:18:03] 2026-03-25 00:17:39,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 20:18:03] 2026-03-25 00:18:01,649 | INFO     | PID=2530242 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-24 20:18:03] 2026-03-25 00:18:01,649 | INFO     | .. there are 67 such processes running
[2026-03-24 20:18:03] 2026-03-25 00:18:01,709 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 20:18:03] 2026-03-25 00:18:01,709 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 20:18:03] 2026-03-25 00:18:01,710 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 20:18:03] 2026-03-25 00:18:01,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 20:18:03] 2026-03-25 00:18:01,710 | INFO     | [monitor] control thread has ended
[2026-03-24 20:18:03] 2026-03-25 00:18:02,900 [wrapper] ==== pilot stdout END ====
[2026-03-24 20:18:03] 2026-03-25 00:18:02,902 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 20:18:03] 2026-03-25 00:18:02,905 [wrapper] pilotpid: 2530242
[2026-03-24 20:18:03] 2026-03-25 00:18:02,907 [wrapper] Pilot exit status: 0
[2026-03-24 20:18:03] 2026-03-25 00:18:02,923 [wrapper] pandaids: 7056979887 7056979887
[2026-03-24 20:18:03] 2026-03-25 00:18:03,063 [wrapper] cleanup supervisor_pilot 2870719 2530243
[2026-03-24 20:18:03] 2026-03-25 00:18:03,068 [wrapper] Test setup, not cleaning
[2026-03-24 20:18:03] 2026-03-25 00:18:03,072 [wrapper] apfmon messages muted
[2026-03-24 20:18:03] 2026-03-25 00:18:03,074 [wrapper] ==== wrapper stdout END ====
[2026-03-24 20:18:03] 2026-03-25 00:18:03,076 [wrapper] ==== wrapper stderr END ====
[2026-03-24 20:18:03]  *** Error codes and diagnostics ***
[2026-03-24 20:18:03]     "exeErrorCode": 0,
[2026-03-24 20:18:03]     "exeErrorDiag": "",
[2026-03-24 20:18:03]     "pilotErrorCode": 0,
[2026-03-24 20:18:03]     "pilotErrorDiag": "",
[2026-03-24 20:18:03]  *** Listing of results directory ***
[2026-03-24 20:18:03] total 712896
[2026-03-24 20:18:03] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 15:43 pilot3.tar.gz
[2026-03-24 20:18:03] -rwx------. 1 boincer umatlas     36322 Mar 16 15:44 runpilot2-wrapper.sh
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 15:47 queuedata.json
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas       100 Mar 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 20:18:03] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 24 00:02 run_atlas
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas       105 Mar 24 00:02 job.xml
[2026-03-24 20:18:03] -rw-r--r--. 3 boincer umatlas 234848361 Mar 24 00:02 EVNT.49136439._000018.pool.root.1
[2026-03-24 20:18:03] -rw-r--r--. 3 boincer umatlas 234848361 Mar 24 00:02 ATLAS.root_0
[2026-03-24 20:18:03] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 00:02 start_atlas.sh
[2026-03-24 20:18:03] drwxrwx--x. 2 boincer umatlas      4096 Mar 24 00:02 shared
[2026-03-24 20:18:03] -rw-r--r--. 2 boincer umatlas    597545 Mar 24 00:02 input.tar.gz
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas         0 Mar 24 00:02 boinc_lockfile
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas      2607 Mar 24 00:21 pandaJob.out
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas        57 Mar 24 00:21 setup.sh.local
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas   1010893 Mar 24 00:22 agis_schedconf.cvmfs.json
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas       429 Mar 24 00:22 workernode_map.json
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas      6944 Mar 24 20:10 init_data.xml
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas 240632835 Mar 24 20:16 HITS.49182169._000432.pool.root.1
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas       530 Mar 24 20:16 boinc_task_state.xml
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas      1047 Mar 24 20:16 memory_monitor_summary.json
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas   1511579 Mar 24 20:17 agis_ddmendpoints.agis.ALL.json
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas   1053258 Mar 24 20:17 log.49182169._000432.job.log.tgz.1
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas      6346 Mar 24 20:17 heartbeat.json
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas        28 Mar 24 20:18 wrapper_checkpoint.txt
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas      8192 Mar 24 20:18 boinc_mmap_file
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas        96 Mar 24 20:18 pilot_heartbeat.json
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas       823 Mar 24 20:18 pilotlog.txt
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas   6808923 Mar 24 20:18 log.49182169._000432.job.log.1
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas       357 Mar 24 20:18 output.list
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas       620 Mar 24 20:18 runtime_log
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas   7884800 Mar 24 20:18 result.tar.gz
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas      9424 Mar 24 20:18 runtime_log.err
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas       788 Mar 24 20:18 hVvKDmo2SM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhuvLDm3XBQNn.diag
[2026-03-24 20:18:03] -rw-r--r--. 1 boincer umatlas     23739 Mar 24 20:18 stderr.txt
[2026-03-24 20:18:03] HITS file was successfully produced:
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas 240632835 Mar 24 20:16 shared/HITS.pool.root.1
[2026-03-24 20:18:03]  *** Contents of shared directory: ***
[2026-03-24 20:18:03] total 472648
[2026-03-24 20:18:03] -rw-r--r--. 3 boincer umatlas 234848361 Mar 24 00:02 ATLAS.root_0
[2026-03-24 20:18:03] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 00:02 start_atlas.sh
[2026-03-24 20:18:03] -rw-r--r--. 2 boincer umatlas    597545 Mar 24 00:02 input.tar.gz
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas 240632835 Mar 24 20:16 HITS.pool.root.1
[2026-03-24 20:18:03] -rw-------. 1 boincer umatlas   7884800 Mar 24 20:18 result.tar.gz
20:18:04 (2501078): run_atlas exited; CPU time 86468.829161
20:18:04 (2501078): called boinc_finish(0)

</stderr_txt>
]]>

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