Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:59:17 (4678): wrapper (7.7.26015): starting
03:59:17 (4678): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 03:59:17] Arguments: --nthreads 8
[2026-03-26 03:59:17] Threads: 8
[2026-03-26 03:59:17] Checking for CVMFS
[2026-03-26 03:59:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 03:59:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 03:59:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 03:59:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 03:59:21] 2.11.2.0 32469 144285 139512 157704 2 195 18967072 25165825 4690 130560 155 45188586 99.767 42389109 1197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-26 03:59:21] CVMFS is ok
[2026-03-26 03:59:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 03:59:21] Checking for apptainer binary...
[2026-03-26 03:59:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 03:59:21] Running /usr/bin/apptainer --version
[2026-03-26 03:59:21] apptainer version 1.3.2-1.el7
[2026-03-26 03:59:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 03:59:36] cg-vwn363.simple-grid.lan
[2026-03-26 03:59:36] apptainer works
[2026-03-26 03:59:36] Set ATHENA_PROC_NUMBER=8
[2026-03-26 03:59:36] Set ATHENA_CORE_NUMBER=8
[2026-03-26 03:59:36] Starting ATLAS job with PandaID=7063772553
[2026-03-26 03:59:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 12:02:45]  *** The last 200 lines of the pilot log: ***
[2026-03-26 12:02:45] 2026-03-26 11:01:49,403 | INFO     | extracted standard info from prmon json
[2026-03-26 12:02:45] 2026-03-26 11:01:49,403 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 12:02:45] 2026-03-26 11:01:49,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 12:02:45] 2026-03-26 11:01:49,403 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 12:02:45] 2026-03-26 11:01:49,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 12:02:45] 2026-03-26 11:01:49,412 | INFO     | fitting pss+swap vs Time
[2026-03-26 12:02:45] 2026-03-26 11:01:49,413 | INFO     | sum of square deviations: 30976357540.0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,423 | INFO     | sum of deviations: 70391290196.99998
[2026-03-26 12:02:45] 2026-03-26 11:01:49,423 | INFO     | mean x: 1774508759.5
[2026-03-26 12:02:45] 2026-03-26 11:01:49,423 | INFO     | mean y: 2517433.2327586208
[2026-03-26 12:02:45] 2026-03-26 11:01:49,423 | INFO     | intersect: -4029911521.197593
[2026-03-26 12:02:45] 2026-03-26 11:01:49,424 | INFO     | chi2: 6.690634552634716
[2026-03-26 12:02:45] 2026-03-26 11:01:49,425 | INFO     | sum of square deviations: 29985715710.0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,431 | INFO     | sum of deviations: 100570499736.99995
[2026-03-26 12:02:45] 2026-03-26 11:01:49,432 | INFO     | mean x: 1774508607.0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,432 | INFO     | mean y: 2522037.0087145967
[2026-03-26 12:02:45] 2026-03-26 11:01:49,432 | INFO     | intersect: -5949085692.470345
[2026-03-26 12:02:45] 2026-03-26 11:01:49,432 | INFO     | chi2: 5.948144567272098
[2026-03-26 12:02:45] 2026-03-26 11:01:49,433 | INFO     | current chi2=5.948144567272098 (change=11.097452409356775 %)
[2026-03-26 12:02:45] 2026-03-26 11:01:49,433 | INFO     | right removable region: 458
[2026-03-26 12:02:45] 2026-03-26 11:01:49,433 | INFO     | sum of square deviations: 29985715710.0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,440 | INFO     | sum of deviations: -95733787594.0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,440 | INFO     | mean x: 1774508912.0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,441 | INFO     | mean y: 2542995.895424837
[2026-03-26 12:02:45] 2026-03-26 11:01:49,441 | INFO     | intersect: 5667922502.191959
[2026-03-26 12:02:45] 2026-03-26 11:01:49,442 | INFO     | chi2: 2.0638604423322136
[2026-03-26 12:02:45] 2026-03-26 11:01:49,442 | INFO     | current chi2=2.0638604423322136 (change=69.15299399338015 %)
[2026-03-26 12:02:45] 2026-03-26 11:01:49,443 | INFO     | sum of square deviations: 29016423117.5
[2026-03-26 12:02:45] 2026-03-26 11:01:49,449 | INFO     | sum of deviations: -157927771459.99997
[2026-03-26 12:02:45] 2026-03-26 11:01:49,449 | INFO     | mean x: 1774509064.5
[2026-03-26 12:02:45] 2026-03-26 11:01:49,450 | INFO     | mean y: 2552741.9515418503
[2026-03-26 12:02:45] 2026-03-26 11:01:49,450 | INFO     | intersect: 9660678447.426147
[2026-03-26 12:02:45] 2026-03-26 11:01:49,450 | INFO     | chi2: 1.1191065126762152
[2026-03-26 12:02:45] 2026-03-26 11:01:49,451 | INFO     | current chi2=1.1191065126762152 (change=45.776056863050435 %)
[2026-03-26 12:02:45] 2026-03-26 11:01:49,451 | INFO     | sum of square deviations: 28068247200.0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,457 | INFO     | sum of deviations: -160184500498.00003
[2026-03-26 12:02:45] 2026-03-26 11:01:49,458 | INFO     | mean x: 1774509217.0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,458 | INFO     | mean y: 2553096.824053452
[2026-03-26 12:02:45] 2026-03-26 11:01:49,458 | INFO     | intersect: 10129614844.88512
[2026-03-26 12:02:45] 2026-03-26 11:01:49,459 | INFO     | chi2: 1.0989922362414646
[2026-03-26 12:02:45] 2026-03-26 11:01:49,459 | INFO     | current chi2=1.0989922362414646 (change=1.797351387639557 %)
[2026-03-26 12:02:45] 2026-03-26 11:01:49,459 | INFO     | left removable region: 30
[2026-03-26 12:02:45] 2026-03-26 11:01:49,460 | INFO     | sum of square deviations: 24311253967.0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,466 | INFO     | sum of deviations: -89116600497.0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,466 | INFO     | mean x: 1774509491.5
[2026-03-26 12:02:45] 2026-03-26 11:01:49,466 | INFO     | mean y: 2551493.9065420562
[2026-03-26 12:02:45] 2026-03-26 11:01:49,467 | INFO     | intersect: 6507286035.645785
[2026-03-26 12:02:45] 2026-03-26 11:01:49,467 | INFO     | chi2: 0.2729104691757286
[2026-03-26 12:02:45] 2026-03-26 11:01:49,468 | INFO     | current memory leak: -3.67 B/s (using 428 data points, chi2=0.27)
[2026-03-26 12:02:45] 2026-03-26 11:01:49,468 | INFO     | could have reported an average CPU frequency of 1999 MHz (19 samples)
[2026-03-26 12:02:45] 2026-03-26 11:01:49,469 | INFO     | ..............................
[2026-03-26 12:02:45] 2026-03-26 11:01:49,469 | INFO     | . Timing measurements:
[2026-03-26 12:02:45] 2026-03-26 11:01:49,469 | INFO     | . get job = 0 s
[2026-03-26 12:02:45] 2026-03-26 11:01:49,469 | INFO     | . initial setup = 95 s
[2026-03-26 12:02:45] 2026-03-26 11:01:49,469 | INFO     | . payload setup = 218 s
[2026-03-26 12:02:45] 2026-03-26 11:01:49,469 | INFO     | . stage-in = 0 s
[2026-03-26 12:02:45] 2026-03-26 11:01:49,469 | INFO     | . payload execution = 28378 s
[2026-03-26 12:02:45] 2026-03-26 11:01:49,469 | INFO     | . stage-out = 3 s
[2026-03-26 12:02:45] 2026-03-26 11:01:49,469 | INFO     | . log creation = 1 s
[2026-03-26 12:02:45] 2026-03-26 11:01:49,469 | INFO     | ..............................
[2026-03-26 12:02:45] 2026-03-26 11:01:49,721 | INFO     | 
[2026-03-26 12:02:45] 2026-03-26 11:01:49,721 | INFO     | job summary report
[2026-03-26 12:02:45] 2026-03-26 11:01:49,721 | INFO     | --------------------------------------------------
[2026-03-26 12:02:45] 2026-03-26 11:01:49,721 | INFO     | PanDA job id: 7063772553
[2026-03-26 12:02:45] 2026-03-26 11:01:49,721 | INFO     | task id: 49191935
[2026-03-26 12:02:45] 2026-03-26 11:01:49,722 | INFO     | errors: (none)
[2026-03-26 12:02:45] 2026-03-26 11:01:49,722 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 12:02:45] 2026-03-26 11:01:49,722 | INFO     | pilot state: finished 
[2026-03-26 12:02:45] 2026-03-26 11:01:49,722 | INFO     | transexitcode: 0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,722 | INFO     | exeerrorcode: 0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,722 | INFO     | exeerrordiag: 
[2026-03-26 12:02:45] 2026-03-26 11:01:49,722 | INFO     | exitcode: 0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,722 | INFO     | exitmsg: OK
[2026-03-26 12:02:45] 2026-03-26 11:01:49,722 | INFO     | cpuconsumptiontime: 110046 s
[2026-03-26 12:02:45] 2026-03-26 11:01:49,722 | INFO     | nevents: 400
[2026-03-26 12:02:45] 2026-03-26 11:01:49,723 | INFO     | neventsw: 0
[2026-03-26 12:02:45] 2026-03-26 11:01:49,723 | INFO     | pid: 13334
[2026-03-26 12:02:45] 2026-03-26 11:01:49,723 | INFO     | pgrp: 13334
[2026-03-26 12:02:45] 2026-03-26 11:01:49,723 | INFO     | corecount: 8
[2026-03-26 12:02:45] 2026-03-26 11:01:49,723 | INFO     | event service: False
[2026-03-26 12:02:45] 2026-03-26 11:01:49,723 | INFO     | sizes: {0: 2279124, 1: 2280182, 2: 2280242, 12: 2280270, 28601: 2317113, 28606: 2326111, 28609: 2326295, 28611: 2326489}
[2026-03-26 12:02:45] 2026-03-26 11:01:49,723 | INFO     | --------------------------------------------------
[2026-03-26 12:02:45] 2026-03-26 11:01:49,723 | INFO     | 
[2026-03-26 12:02:45] 2026-03-26 11:01:49,723 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-26 12:02:45] 2026-03-26 11:01:49,998 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:49,999 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:49,999 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:49,999 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:49,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:49,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:49,999 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:49,999 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 12:02:45] 2026-03-26 11:01:50,000 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,001 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 12:02:45] 2026-03-26 11:01:50,001 | INFO     | job 7063772553 has completed (purged errors)
[2026-03-26 12:02:45] 2026-03-26 11:01:50,001 | INFO     | overall cleanup function is called
[2026-03-26 12:02:45] 2026-03-26 11:01:50,466 | INFO     | PID=8827 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-26 12:02:45] 2026-03-26 11:01:50,466 | INFO     | .. there are 9 such processes running
[2026-03-26 12:02:45] 2026-03-26 11:01:51,010 | INFO     | --- collectZombieJob: --- 10, [13334]
[2026-03-26 12:02:45] 2026-03-26 11:01:51,010 | INFO     | zombie collector waiting for pid 13334
[2026-03-26 12:02:45] 2026-03-26 11:01:51,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 12:02:45] 2026-03-26 11:01:51,010 | INFO     | collected zombie processes
[2026-03-26 12:02:45] 2026-03-26 11:01:51,011 | INFO     | will attempt to kill all subprocesses of pid=13334
[2026-03-26 12:02:45] 2026-03-26 11:01:51,117 | INFO     | process IDs to be killed: [13334] (in reverse order)
[2026-03-26 12:02:45] 2026-03-26 11:01:51,809 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 12:02:45] 2026-03-26 11:01:51,809 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 12:02:45] 2026-03-26 11:01:51,812 | INFO     | did not find any defunct processes belonging to 13334
[2026-03-26 12:02:45] 2026-03-26 11:01:51,815 | INFO     | did not find any defunct processes belonging to 13334
[2026-03-26 12:02:45] 2026-03-26 11:01:51,815 | INFO     | ready for new job
[2026-03-26 12:02:45] 2026-03-26 11:01:51,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 12:02:45] 2026-03-26 11:01:51,818 | INFO     | **************************************
[2026-03-26 12:02:45] 2026-03-26 11:01:51,818 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 12:02:45] 2026-03-26 11:01:51,818 | INFO     | **************************************
[2026-03-26 12:02:45] 2026-03-26 11:01:51,818 | INFO     | 
[2026-03-26 12:02:45] 2026-03-26 11:01:51,819 | INFO     | pilot is running in a VM
[2026-03-26 12:02:45] 2026-03-26 11:01:51,819 | INFO     | architecture information:
[2026-03-26 12:02:45] 2026-03-26 11:01:51,829 | INFO     | executing command: cat /etc/os-release
[2026-03-26 12:02:45] 2026-03-26 11:01:52,072 | INFO     | cat /etc/os-release:
[2026-03-26 12:02:45] NAME="CentOS Linux"
[2026-03-26 12:02:45] VERSION="7 (Core)"
[2026-03-26 12:02:45] ID="centos"
[2026-03-26 12:02:45] ID_LIKE="rhel fedora"
[2026-03-26 12:02:45] VERSION_ID="7"
[2026-03-26 12:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 12:02:45] ANSI_COLOR="0;31"
[2026-03-26 12:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 12:02:45] HOME_URL="https://www.centos.org/"
[2026-03-26 12:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 12:02:45] 
[2026-03-26 12:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 12:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 12:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 12:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 12:02:45] 
[2026-03-26 12:02:45] 2026-03-26 11:01:52,072 | INFO     | **************************************
[2026-03-26 12:02:45] 2026-03-26 11:01:52,575 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-26 12:02:45] 2026-03-26 11:01:52,749 | INFO     | sufficient remaining disk space (495294873600 B)
[2026-03-26 12:02:45] 2026-03-26 11:01:52,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 12:02:45] 2026-03-26 11:01:52,750 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 12:02:45] 2026-03-26 11:01:52,750 | INFO     | update_server=False
[2026-03-26 12:02:45] 2026-03-26 11:01:52,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 12:02:45] 2026-03-26 11:01:52,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 12:02:45] 2026-03-26 11:01:52,873 | INFO     | all data control threads have been joined
[2026-03-26 12:02:45] 2026-03-26 11:01:53,067 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-26 12:02:45] 2026-03-26 11:01:53,067 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-26 12:02:45] 2026-03-26 11:01:53,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 12:02:45] 2026-03-26 11:01:53,067 | INFO     | will abort loop
[2026-03-26 12:02:45] 2026-03-26 11:01:53,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 12:02:45] 2026-03-26 11:01:53,756 | INFO     | [job] retrieve thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:53,826 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:53,860 | INFO     | all payload control threads have been joined
[2026-03-26 12:02:45] 2026-03-26 11:01:53,879 | INFO     | [data] control thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:53,966 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:54,073 | INFO     | [job] job monitor thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:54,200 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:54,432 | INFO     | all job control threads have been joined
[2026-03-26 12:02:45] 2026-03-26 11:01:54,439 | INFO     | [payload] failed_post thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:54,531 | INFO     | [job] validate thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:54,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 12:02:45] 2026-03-26 11:01:54,757 | INFO     | [data] copytool_out thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:54,867 | INFO     | [payload] control thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:54,899 | INFO     | [data] copytool_in thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:54,912 | INFO     | [payload] validate_post thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:55,171 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:55,438 | INFO     | [job] control thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:55,629 | INFO     | [job] queue monitor thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:01:57,507 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 12:02:45] 2026-03-26 11:02:22,647 | INFO     | PID=8827 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-26 12:02:45] 2026-03-26 11:02:22,647 | INFO     | .. there are 9 such processes running
[2026-03-26 12:02:45] 2026-03-26 11:02:22,647 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 12:02:45] 2026-03-26 11:02:22,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 12:02:45] 2026-03-26 11:02:22,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 12:02:45] 2026-03-26 11:02:34,789 | INFO     | [monitor] cgroup control has ended
[2026-03-26 12:02:45] 2026-03-26 11:02:36,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143597713216)>', '<ExcThread(monitor, started 140142987679488)>']
[2026-03-26 12:02:45] 2026-03-26 11:02:36,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 12:02:45] 2026-03-26 11:02:36,732 | INFO     | [monitor] control thread has ended
[2026-03-26 12:02:45] 2026-03-26 11:02:41,423 | INFO     | all workflow threads have been joined
[2026-03-26 12:02:45] 2026-03-26 11:02:41,423 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 12:02:45] 2026-03-26 11:02:41,423 | INFO     | traces error code: 0
[2026-03-26 12:02:45] 2026-03-26 11:02:41,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 12:02:45] 2026-03-26 11:02:41,894 [wrapper] ==== pilot stdout END ====
[2026-03-26 12:02:45] 2026-03-26 11:02:41,960 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 12:02:45] 2026-03-26 11:02:42,028 [wrapper] pilotpid: 8827
[2026-03-26 12:02:45] 2026-03-26 11:02:42,101 [wrapper] Pilot exit status: 0
[2026-03-26 12:02:45] 2026-03-26 11:02:42,376 [wrapper] pandaids: 7063772553
[2026-03-26 12:02:45] 2026-03-26 11:02:43,055 [wrapper] cleanup supervisor_pilot 12918 8828
[2026-03-26 12:02:45] 2026-03-26 11:02:43,150 [wrapper] Test setup, not cleaning
[2026-03-26 12:02:45] 2026-03-26 11:02:43,249 [wrapper] apfmon messages muted
[2026-03-26 12:02:45] 2026-03-26 11:02:43,346 [wrapper] ==== wrapper stdout END ====
[2026-03-26 12:02:45] 2026-03-26 11:02:43,395 [wrapper] ==== wrapper stderr END ====
[2026-03-26 12:02:45]  *** Error codes and diagnostics ***
[2026-03-26 12:02:45]     "exeErrorCode": 0,
[2026-03-26 12:02:45]     "exeErrorDiag": "",
[2026-03-26 12:02:45]     "pilotErrorCode": 0,
[2026-03-26 12:02:45]     "pilotErrorDiag": "",
[2026-03-26 12:02:45]  *** Listing of results directory ***
[2026-03-26 12:02:45] total 485592
[2026-03-26 12:02:45] -rwx------. 1 boinc boinc     36322 Mar 24 03:43 runpilot2-wrapper.sh
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc    585013 Mar 24 03:46 pilot3.tar.gz
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc      5111 Mar 24 03:47 queuedata.json
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc       100 Mar 26 03:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 12:02:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar 26 03:59 run_atlas
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc       105 Mar 26 03:59 job.xml
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc      6391 Mar 26 03:59 init_data.xml
[2026-03-26 12:02:45] -rw-r--r--. 2 boinc boinc 255272352 Mar 26 03:59 EVNT.49129295._000001.pool.root.1
[2026-03-26 12:02:45] -rw-r--r--. 2 boinc boinc     15845 Mar 26 03:59 start_atlas.sh
[2026-03-26 12:02:45] drwxrwx--x. 2 boinc boinc        68 Mar 26 03:59 shared
[2026-03-26 12:02:45] -rw-r--r--. 2 boinc boinc    597538 Mar 26 03:59 input.tar.gz
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc         0 Mar 26 03:59 boinc_lockfile
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc      2588 Mar 26 03:59 pandaJob.out
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc       415 Mar 26 04:04 workernode_map.json
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc   1012171 Mar 26 04:04 agis_schedconf.cvmfs.json
[2026-03-26 12:02:45] drwx------. 5 boinc boinc      4096 Mar 26 04:04 pilot3
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc 228826658 Mar 26 12:00 HITS.49191935._000038.pool.root.1
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc       531 Mar 26 12:00 boinc_task_state.xml
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc        95 Mar 26 12:01 pilot_heartbeat.json
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc      1018 Mar 26 12:01 memory_monitor_summary.json
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc   1511579 Mar 26 12:01 agis_ddmendpoints.agis.ALL.json
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc    668133 Mar 26 12:01 log.49191935._000038.job.log.tgz.1
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc      6312 Mar 26 12:01 heartbeat.json
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc      8192 Mar 26 12:02 boinc_mmap_file
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc        29 Mar 26 12:02 wrapper_checkpoint.txt
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc      5065 Mar 26 12:02 pilotlog.txt
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc   3939576 Mar 26 12:02 log.49191935._000038.job.log.1
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc       357 Mar 26 12:02 output.list
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc       620 Mar 26 12:02 runtime_log
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc   4628480 Mar 26 12:02 result.tar.gz
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc      8816 Mar 26 12:02 runtime_log.err
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc       658 Mar 26 12:02 IkVMDmUv6O9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKzBMDmmAwAPn.diag
[2026-03-26 12:02:45] -rw-r--r--. 1 boinc boinc     20784 Mar 26 12:02 stderr.txt
[2026-03-26 12:02:45] HITS file was successfully produced:
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc 228826658 Mar 26 12:00 shared/HITS.pool.root.1
[2026-03-26 12:02:45]  *** Contents of shared directory: ***
[2026-03-26 12:02:45] total 477876
[2026-03-26 12:02:45] -rw-r--r--. 2 boinc boinc 255272352 Mar 26 03:59 ATLAS.root_0
[2026-03-26 12:02:45] -rw-r--r--. 2 boinc boinc     15845 Mar 26 03:59 start_atlas.sh
[2026-03-26 12:02:45] -rw-r--r--. 2 boinc boinc    597538 Mar 26 03:59 input.tar.gz
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc 228826658 Mar 26 12:00 HITS.pool.root.1
[2026-03-26 12:02:45] -rw-------. 1 boinc boinc   4628480 Mar 26 12:02 result.tar.gz
12:02:47 (4678): run_atlas exited; CPU time 110486.075202
12:02:47 (4678): called boinc_finish(0)

</stderr_txt>
]]>

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