Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:22:29 (6672): wrapper (7.7.26015): starting
06:22:29 (6672): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 06:22:29] Arguments: --nthreads 8
[2026-03-26 06:22:29] Threads: 8
[2026-03-26 06:22:29] Checking for CVMFS
[2026-03-26 06:22:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 06:22:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 06:22:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 06:22:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 06:22:33] 2.11.2.0 19565 9070 92044 157709 0 53 14241658 25165824 4586 130560 0 1959594 99.630 2617358 3029 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-26 06:22:33] CVMFS is ok
[2026-03-26 06:22:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 06:22:33] Checking for apptainer binary...
[2026-03-26 06:22:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 06:22:33] Running /usr/bin/apptainer --version
[2026-03-26 06:22:33] apptainer version 1.3.2-1.el7
[2026-03-26 06:22:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 06:22:39] cg-vwn481.simple-grid.lan
[2026-03-26 06:22:39] apptainer works
[2026-03-26 06:22:39] Set ATHENA_PROC_NUMBER=8
[2026-03-26 06:22:39] Set ATHENA_CORE_NUMBER=8
[2026-03-26 06:22:39] Starting ATLAS job with PandaID=7063799029
[2026-03-26 06:22:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 13:32:22]  *** The last 200 lines of the pilot log: ***
[2026-03-26 13:32:22] 2026-03-26 12:31:08,848 | INFO     | total number of processed events: 400 (read)
[2026-03-26 13:32:22] 2026-03-26 12:31:08,850 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7063799029/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 13:32:22] 2026-03-26 12:31:08,850 | INFO     | extracted standard info from prmon json
[2026-03-26 13:32:22] 2026-03-26 12:31:08,850 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 13:32:22] 2026-03-26 12:31:08,850 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 13:32:22] 2026-03-26 12:31:08,851 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 13:32:22] 2026-03-26 12:31:08,851 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 13:32:22] 2026-03-26 12:31:08,858 | INFO     | fitting pss+swap vs Time
[2026-03-26 13:32:22] 2026-03-26 12:31:08,859 | INFO     | sum of square deviations: 21685403803.0
[2026-03-26 13:32:22] 2026-03-26 12:31:08,869 | INFO     | sum of deviations: 120644559351.50002
[2026-03-26 13:32:22] 2026-03-26 12:31:08,869 | INFO     | mean x: 1774515670.5
[2026-03-26 13:32:22] 2026-03-26 12:31:08,869 | INFO     | mean y: 2500342.041262136
[2026-03-26 13:32:22] 2026-03-26 12:31:08,869 | INFO     | intersect: -9869838816.346329
[2026-03-26 13:32:22] 2026-03-26 12:31:08,870 | INFO     | chi2: 5.888006783173736
[2026-03-26 13:32:22] 2026-03-26 12:31:08,870 | INFO     | sum of square deviations: 20905426388.0
[2026-03-26 13:32:22] 2026-03-26 12:31:08,875 | INFO     | sum of deviations: 146634241585.99997
[2026-03-26 13:32:22] 2026-03-26 12:31:08,875 | INFO     | mean x: 1774515518.0
[2026-03-26 13:32:22] 2026-03-26 12:31:08,875 | INFO     | mean y: 2505370.2137592137
[2026-03-26 13:32:22] 2026-03-26 12:31:08,875 | INFO     | intersect: -12444250430.657108
[2026-03-26 13:32:22] 2026-03-26 12:31:08,876 | INFO     | chi2: 5.140972185750748
[2026-03-26 13:32:22] 2026-03-26 12:31:08,876 | INFO     | current chi2=5.140972185750748 (change=12.687393627972762 %)
[2026-03-26 13:32:22] 2026-03-26 12:31:08,876 | INFO     | right removable region: 406
[2026-03-26 13:32:22] 2026-03-26 12:31:08,877 | INFO     | sum of square deviations: 20905426388.0
[2026-03-26 13:32:22] 2026-03-26 12:31:08,881 | INFO     | sum of deviations: -19237508512.0
[2026-03-26 13:32:22] 2026-03-26 12:31:08,882 | INFO     | mean x: 1774515823.0
[2026-03-26 13:32:22] 2026-03-26 12:31:08,882 | INFO     | mean y: 2527669.793611794
[2026-03-26 13:32:22] 2026-03-26 12:31:08,882 | INFO     | intersect: 1635465578.6437483
[2026-03-26 13:32:22] 2026-03-26 12:31:08,882 | INFO     | chi2: 1.654372030309647
[2026-03-26 13:32:22] 2026-03-26 12:31:08,882 | INFO     | current chi2=1.654372030309647 (change=71.90268131080664 %)
[2026-03-26 13:32:22] 2026-03-26 12:31:08,883 | INFO     | sum of square deviations: 20144379560.5
[2026-03-26 13:32:22] 2026-03-26 12:31:08,900 | INFO     | sum of deviations: -63894365454.000015
[2026-03-26 13:32:22] 2026-03-26 12:31:08,900 | INFO     | mean x: 1774515975.5
[2026-03-26 13:32:22] 2026-03-26 12:31:08,900 | INFO     | mean y: 2536572.815920398
[2026-03-26 13:32:22] 2026-03-26 12:31:08,900 | INFO     | intersect: 5630983549.901381
[2026-03-26 13:32:22] 2026-03-26 12:31:08,901 | INFO     | chi2: 0.997779618426714
[2026-03-26 13:32:22] 2026-03-26 12:31:08,901 | INFO     | current chi2=0.997779618426714 (change=39.68831676633455 %)
[2026-03-26 13:32:22] 2026-03-26 12:31:08,901 | INFO     | sum of square deviations: 19402030758.0
[2026-03-26 13:32:22] 2026-03-26 12:31:08,906 | INFO     | sum of deviations: -70830178548.0
[2026-03-26 13:32:22] 2026-03-26 12:31:08,906 | INFO     | mean x: 1774516128.0
[2026-03-26 13:32:22] 2026-03-26 12:31:08,906 | INFO     | mean y: 2537997.6171284635
[2026-03-26 13:32:22] 2026-03-26 12:31:08,906 | INFO     | intersect: 6480689473.11257
[2026-03-26 13:32:22] 2026-03-26 12:31:08,907 | INFO     | chi2: 0.9811312478991995
[2026-03-26 13:32:22] 2026-03-26 12:31:08,907 | INFO     | current chi2=0.9811312478991995 (change=1.668541852334636 %)
[2026-03-26 13:32:22] 2026-03-26 12:31:08,907 | INFO     | left removable region: 30
[2026-03-26 13:32:22] 2026-03-26 12:31:08,908 | INFO     | sum of square deviations: 16483099750.0
[2026-03-26 13:32:22] 2026-03-26 12:31:08,912 | INFO     | sum of deviations: -12065526262.499994
[2026-03-26 13:32:22] 2026-03-26 12:31:08,912 | INFO     | mean x: 1774516402.5
[2026-03-26 13:32:22] 2026-03-26 12:31:08,912 | INFO     | mean y: 2536664.789893617
[2026-03-26 13:32:22] 2026-03-26 12:31:08,912 | INFO     | intersect: 1301471609.207782
[2026-03-26 13:32:22] 2026-03-26 12:31:08,913 | INFO     | chi2: 0.12370049230435001
[2026-03-26 13:32:22] 2026-03-26 12:31:08,913 | INFO     | current memory leak: -0.73 B/s (using 376 data points, chi2=0.12)
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | could have reported an average CPU frequency of 2249 MHz (18 samples)
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | ..............................
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | . Timing measurements:
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | . get job = 0 s
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | . initial setup = 89 s
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | . payload setup = 165 s
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | . stage-in = 0 s
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | . payload execution = 25229 s
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | . stage-out = 3 s
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | . log creation = 1 s
[2026-03-26 13:32:22] 2026-03-26 12:31:08,914 | INFO     | ..............................
[2026-03-26 13:32:22] 2026-03-26 12:31:09,031 | INFO     | 
[2026-03-26 13:32:22] 2026-03-26 12:31:09,031 | INFO     | job summary report
[2026-03-26 13:32:22] 2026-03-26 12:31:09,031 | INFO     | --------------------------------------------------
[2026-03-26 13:32:22] 2026-03-26 12:31:09,031 | INFO     | PanDA job id: 7063799029
[2026-03-26 13:32:22] 2026-03-26 12:31:09,031 | INFO     | task id: 49278491
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | errors: (none)
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | pilot state: finished 
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | transexitcode: 0
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | exeerrorcode: 0
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | exeerrordiag: 
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | exitcode: 0
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | exitmsg: OK
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | cpuconsumptiontime: 97965 s
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | nevents: 400
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | neventsw: 0
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | pid: 15301
[2026-03-26 13:32:22] 2026-03-26 12:31:09,032 | INFO     | pgrp: 15301
[2026-03-26 13:32:22] 2026-03-26 12:31:09,033 | INFO     | corecount: 8
[2026-03-26 13:32:22] 2026-03-26 12:31:09,033 | INFO     | event service: False
[2026-03-26 13:32:22] 2026-03-26 12:31:09,033 | INFO     | sizes: {0: 2279752, 1: 2280209, 2: 2280269, 12: 2280297, 25399: 2315865, 25404: 2324865, 25406: 2325049, 25409: 2325243}
[2026-03-26 13:32:22] 2026-03-26 12:31:09,033 | INFO     | --------------------------------------------------
[2026-03-26 13:32:22] 2026-03-26 12:31:09,033 | INFO     | 
[2026-03-26 13:32:22] 2026-03-26 12:31:09,033 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-03-26 13:32:22] 2026-03-26 12:31:09,515 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,515 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,517 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 13:32:22] 2026-03-26 12:31:09,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,517 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 13:32:22] 2026-03-26 12:31:09,517 | INFO     | job 7063799029 has completed (purged errors)
[2026-03-26 13:32:22] 2026-03-26 12:31:09,517 | INFO     | overall cleanup function is called
[2026-03-26 13:32:22] 2026-03-26 12:31:10,526 | INFO     | --- collectZombieJob: --- 10, [15301]
[2026-03-26 13:32:22] 2026-03-26 12:31:10,526 | INFO     | zombie collector waiting for pid 15301
[2026-03-26 13:32:22] 2026-03-26 12:31:10,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 13:32:22] 2026-03-26 12:31:10,526 | INFO     | collected zombie processes
[2026-03-26 13:32:22] 2026-03-26 12:31:10,526 | INFO     | will attempt to kill all subprocesses of pid=15301
[2026-03-26 13:32:22] 2026-03-26 12:31:10,640 | INFO     | process IDs to be killed: [15301] (in reverse order)
[2026-03-26 13:32:22] 2026-03-26 12:31:11,305 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 13:32:22] 2026-03-26 12:31:11,305 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 13:32:22] 2026-03-26 12:31:11,308 | INFO     | did not find any defunct processes belonging to 15301
[2026-03-26 13:32:22] 2026-03-26 12:31:11,311 | INFO     | did not find any defunct processes belonging to 15301
[2026-03-26 13:32:22] 2026-03-26 12:31:11,312 | INFO     | ready for new job
[2026-03-26 13:32:22] 2026-03-26 12:31:11,312 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 13:32:22] 2026-03-26 12:31:11,314 | INFO     | **************************************
[2026-03-26 13:32:22] 2026-03-26 12:31:11,314 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 13:32:22] 2026-03-26 12:31:11,314 | INFO     | **************************************
[2026-03-26 13:32:22] 2026-03-26 12:31:11,315 | INFO     | 
[2026-03-26 13:32:22] 2026-03-26 12:31:11,315 | INFO     | pilot is running in a VM
[2026-03-26 13:32:22] 2026-03-26 12:31:11,315 | INFO     | architecture information:
[2026-03-26 13:32:22] 2026-03-26 12:31:11,316 | INFO     | executing command: cat /etc/os-release
[2026-03-26 13:32:22] 2026-03-26 12:31:11,550 | INFO     | cat /etc/os-release:
[2026-03-26 13:32:22] NAME="CentOS Linux"
[2026-03-26 13:32:22] VERSION="7 (Core)"
[2026-03-26 13:32:22] ID="centos"
[2026-03-26 13:32:22] ID_LIKE="rhel fedora"
[2026-03-26 13:32:22] VERSION_ID="7"
[2026-03-26 13:32:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 13:32:22] ANSI_COLOR="0;31"
[2026-03-26 13:32:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 13:32:22] HOME_URL="https://www.centos.org/"
[2026-03-26 13:32:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 13:32:22] 
[2026-03-26 13:32:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 13:32:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 13:32:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 13:32:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 13:32:22] 
[2026-03-26 13:32:22] 2026-03-26 12:31:11,551 | INFO     | **************************************
[2026-03-26 13:32:22] 2026-03-26 12:31:12,054 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-03-26 13:32:22] 2026-03-26 12:31:12,322 | INFO     | sufficient remaining disk space (495091449856 B)
[2026-03-26 13:32:22] 2026-03-26 12:31:12,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 13:32:22] 2026-03-26 12:31:12,323 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 13:32:22] 2026-03-26 12:31:12,323 | INFO     | update_server=False
[2026-03-26 13:32:22] 2026-03-26 12:31:12,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 13:32:22] 2026-03-26 12:31:12,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 13:32:22] 2026-03-26 12:31:12,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 13:32:22] 2026-03-26 12:31:12,514 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-26 13:32:22] 2026-03-26 12:31:12,514 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-26 13:32:22] 2026-03-26 12:31:12,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 13:32:22] 2026-03-26 12:31:12,514 | INFO     | will abort loop
[2026-03-26 13:32:22] 2026-03-26 12:31:12,678 | INFO     | all data control threads have been joined
[2026-03-26 13:32:22] 2026-03-26 12:31:12,935 | INFO     | all job control threads have been joined
[2026-03-26 13:32:22] 2026-03-26 12:31:13,075 | INFO     | all payload control threads have been joined
[2026-03-26 13:32:22] 2026-03-26 12:31:13,329 | INFO     | [job] retrieve thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:13,338 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:13,520 | INFO     | [job] job monitor thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:13,561 | INFO     | [data] copytool_in thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:13,601 | INFO     | [payload] validate_post thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:13,684 | INFO     | [data] control thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:13,715 | INFO     | [payload] failed_post thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:13,788 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:13,837 | INFO     | [job] validate thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:13,941 | INFO     | [job] control thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:14,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 13:32:22] 2026-03-26 12:31:14,081 | INFO     | [payload] control thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:14,155 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:14,195 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:14,331 | INFO     | [data] copytool_out thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:15,050 | INFO     | [job] queue monitor thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:16,515 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 13:32:22] 2026-03-26 12:31:41,328 | INFO     | PID=10791 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-26 13:32:22] 2026-03-26 12:31:41,328 | INFO     | .. there are 9 such processes running
[2026-03-26 13:32:22] 2026-03-26 12:31:41,329 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 13:32:22] 2026-03-26 12:31:41,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 13:32:22] 2026-03-26 12:31:41,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 13:32:22] 2026-03-26 12:32:11,450 | INFO     | [monitor] cgroup control has ended
[2026-03-26 13:32:22] 2026-03-26 12:32:12,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253380073280)>', '<ExcThread(monitor, started 140252928784128)>']
[2026-03-26 13:32:22] 2026-03-26 12:32:13,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 13:32:22] 2026-03-26 12:32:13,521 | INFO     | [monitor] control thread has ended
[2026-03-26 13:32:22] 2026-03-26 12:32:17,998 | INFO     | all workflow threads have been joined
[2026-03-26 13:32:22] 2026-03-26 12:32:17,998 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 13:32:22] 2026-03-26 12:32:17,998 | INFO     | traces error code: 0
[2026-03-26 13:32:22] 2026-03-26 12:32:17,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 13:32:22] 2026-03-26 12:32:18,354 [wrapper] ==== pilot stdout END ====
[2026-03-26 13:32:22] 2026-03-26 12:32:18,446 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 13:32:22] 2026-03-26 12:32:18,520 [wrapper] pilotpid: 10791
[2026-03-26 13:32:22] 2026-03-26 12:32:18,599 [wrapper] Pilot exit status: 0
[2026-03-26 13:32:22] 2026-03-26 12:32:19,068 [wrapper] pandaids: 7063799029
[2026-03-26 13:32:22] 2026-03-26 12:32:20,121 [wrapper] cleanup supervisor_pilot  8891 10792
[2026-03-26 13:32:22] 2026-03-26 12:32:20,177 [wrapper] Test setup, not cleaning
[2026-03-26 13:32:22] 2026-03-26 12:32:20,261 [wrapper] apfmon messages muted
[2026-03-26 13:32:22] 2026-03-26 12:32:20,318 [wrapper] ==== wrapper stdout END ====
[2026-03-26 13:32:22] 2026-03-26 12:32:20,407 [wrapper] ==== wrapper stderr END ====
[2026-03-26 13:32:22]  *** Error codes and diagnostics ***
[2026-03-26 13:32:22]     "exeErrorCode": 0,
[2026-03-26 13:32:22]     "exeErrorDiag": "",
[2026-03-26 13:32:22]     "pilotErrorCode": 0,
[2026-03-26 13:32:22]     "pilotErrorDiag": "",
[2026-03-26 13:32:22]  *** Listing of results directory ***
[2026-03-26 13:32:22] total 482992
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc    585013 Mar 24 03:40 pilot3.tar.gz
[2026-03-26 13:32:22] -rwx------. 1 boinc boinc     36322 Mar 24 03:41 runpilot2-wrapper.sh
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc      5111 Mar 24 03:41 queuedata.json
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc       100 Mar 26 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 13:32:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar 26 06:22 run_atlas
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc       105 Mar 26 06:22 job.xml
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc      6392 Mar 26 06:22 init_data.xml
[2026-03-26 13:32:22] -rw-r--r--. 2 boinc boinc 254366308 Mar 26 06:22 EVNT.49137645._000001.pool.root.1
[2026-03-26 13:32:22] -rw-r--r--. 2 boinc boinc     15845 Mar 26 06:22 start_atlas.sh
[2026-03-26 13:32:22] drwxrwx--x. 2 boinc boinc        68 Mar 26 06:22 shared
[2026-03-26 13:32:22] -rw-r--r--. 2 boinc boinc    597517 Mar 26 06:22 input.tar.gz
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc         0 Mar 26 06:22 boinc_lockfile
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc      2564 Mar 26 06:22 pandaJob.out
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc       415 Mar 26 06:27 workernode_map.json
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc   1012182 Mar 26 06:27 agis_schedconf.cvmfs.json
[2026-03-26 13:32:22] drwx------. 5 boinc boinc      4096 Mar 26 06:27 pilot3
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc 228011017 Mar 26 13:29 HITS.49278491._000062.pool.root.1
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc       530 Mar 26 13:30 boinc_task_state.xml
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc      1015 Mar 26 13:30 memory_monitor_summary.json
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc   1511579 Mar 26 13:31 agis_ddmendpoints.agis.ALL.json
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc    613209 Mar 26 13:31 log.49278491._000062.job.log.tgz.1
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc      6303 Mar 26 13:31 heartbeat.json
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc        95 Mar 26 13:31 pilot_heartbeat.json
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc        28 Mar 26 13:32 wrapper_checkpoint.txt
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc      8192 Mar 26 13:32 boinc_mmap_file
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc      5067 Mar 26 13:32 pilotlog.txt
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc   3522843 Mar 26 13:32 log.49278491._000062.job.log.1
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc       357 Mar 26 13:32 output.list
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc       620 Mar 26 13:32 runtime_log
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc   4157440 Mar 26 13:32 result.tar.gz
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc       657 Mar 26 13:32 t3aKDm0s6O9n9Rq4apOajLDm4fhM0noT9bVoINGKDmeWFKDmeBVVem.diag
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc      8832 Mar 26 13:32 runtime_log.err
[2026-03-26 13:32:22] -rw-r--r--. 1 boinc boinc     20723 Mar 26 13:32 stderr.txt
[2026-03-26 13:32:22] HITS file was successfully produced:
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc 228011017 Mar 26 13:29 shared/HITS.pool.root.1
[2026-03-26 13:32:22]  *** Contents of shared directory: ***
[2026-03-26 13:32:22] total 475736
[2026-03-26 13:32:22] -rw-r--r--. 2 boinc boinc 254366308 Mar 26 06:22 ATLAS.root_0
[2026-03-26 13:32:22] -rw-r--r--. 2 boinc boinc     15845 Mar 26 06:22 start_atlas.sh
[2026-03-26 13:32:22] -rw-r--r--. 2 boinc boinc    597517 Mar 26 06:22 input.tar.gz
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc 228011017 Mar 26 13:29 HITS.pool.root.1
[2026-03-26 13:32:22] -rw-------. 1 boinc boinc   4157440 Mar 26 13:32 result.tar.gz
13:32:24 (6672): run_atlas exited; CPU time 98315.099395
13:32:24 (6672): called boinc_finish(0)

</stderr_txt>
]]>

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