Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:35:45 (3689485): wrapper (7.7.26015): starting
00:35:45 (3689485): wrapper: running run_atlas (--nthreads 12)
[2026-03-26 00:35:45] Arguments: --nthreads 12
[2026-03-26 00:35:45] Threads: 12
[2026-03-26 00:35:45] Checking for CVMFS
[2026-03-26 00:35:45] No cvmfs_config command found, will try listing directly
[2026-03-26 00:35:45] CVMFS is ok
[2026-03-26 00:35:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 00:35:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 00:35:45] Further information can be found at the LHC@home message board.
[2026-03-26 00:35:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 00:35:45] Checking for apptainer binary...
[2026-03-26 00:35:45] which: no apptainer in ((null))
[2026-03-26 00:35:45] apptainer is not installed, using version from CVMFS
[2026-03-26 00:35:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 00:35:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-26 00:35:45] apptainer works
[2026-03-26 00:35:45] Set ATHENA_PROC_NUMBER=12
[2026-03-26 00:35:45] Set ATHENA_CORE_NUMBER=12
[2026-03-26 00:35:45] Starting ATLAS job with PandaID=7058884937
[2026-03-26 00:35:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 01:09:06]  *** The last 200 lines of the pilot log: ***
[2026-03-26 01:09:06]  filesize=355026
[2026-03-26 01:09:06]  filetype=log
[2026-03-26 01:09:06]  guid=df7e6b39-a3cd-4c1b-8881-285814cf26d0
[2026-03-26 01:09:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-26 01:09:06]  is_altstaged=None
[2026-03-26 01:09:06]  is_tar=False
[2026-03-26 01:09:06]  lfn=log.48967094._012738.job.log.tgz.1
[2026-03-26 01:09:06]  mtime=0
[2026-03-26 01:09:06]  protocol_id=None
[2026-03-26 01:09:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-26 01:09:06]  replicas=None
[2026-03-26 01:09:06]  scope=mc23_13p6TeV
[2026-03-26 01:09:06]  status=None
[2026-03-26 01:09:06]  status_code=0
[2026-03-26 01:09:06]  storage_token=
[2026-03-26 01:09:06]  surl=/var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7058884937/log.48967094._012738.job.log.tgz.1
[2026-03-26 01:09:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/eb/log.48967094._012738.job.log.tgz.1
[2026-03-26 01:09:06]  workdir=None
[2026-03-26 01:09:06] ]
[2026-03-26 01:09:06] 2026-03-26 00:08:00,451 | INFO     | transferring file log.48967094._012738.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7058884937/log.48967094._012738.job.log.tgz.1 to /var/lib/
[2026-03-26 01:09:06] 2026-03-26 00:08:00,451 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7058884937/log.48967094._012738.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/1/
[2026-03-26 01:09:06] 2026-03-26 00:08:00,468 | INFO     | adding to output.list: log.48967094._012738.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/eb/log.48967094._012738.job.log.tg
[2026-03-26 01:09:06] 2026-03-26 00:08:00,468 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-26 01:09:06] 2026-03-26 00:08:00,468 | INFO     | summary of transferred files:
[2026-03-26 01:09:06] 2026-03-26 00:08:00,468 | INFO     |  -- lfn=log.48967094._012738.job.log.tgz.1, status_code=0, status=transferred
[2026-03-26 01:09:06] 2026-03-26 00:08:00,469 | INFO     | stage-out finished correctly
[2026-03-26 01:09:06] 2026-03-26 00:08:01,634 | INFO     | time since job start (1925s) is within the limit (345600.0s)
[2026-03-26 01:09:06] 2026-03-26 00:08:01,669 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-26 01:09:06] 2026-03-26 00:08:01,718 | INFO     | job 7058884937 has state=finished
[2026-03-26 01:09:06] 2026-03-26 00:08:01,718 | INFO     | preparing for final server update for job 7058884937 in state='finished'
[2026-03-26 01:09:06] 2026-03-26 00:08:02,148 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-26 01:09:06] 2026-03-26 00:08:02,148 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7058884937/jobReport.json
[2026-03-26 01:09:06] 2026-03-26 00:08:02,149 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/1/workernode_map.json
[2026-03-26 01:09:06] 2026-03-26 00:08:02,150 | INFO     | this job has now completed (state=finished)
[2026-03-26 01:09:06] 2026-03-26 00:08:02,150 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-26 01:09:06] 2026-03-26 00:08:02,150 | INFO     | log transfer has been attempted: DONE
[2026-03-26 01:09:06] 2026-03-26 00:08:02,150 | INFO     | job 7058884937 has finished - writing final server update
[2026-03-26 01:09:06] 2026-03-26 00:08:02,150 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1687223/.job.ad'
[2026-03-26 01:09:06] 2026-03-26 00:08:02,150 | INFO     | total number of processed events: 400 (read)
[2026-03-26 01:09:06] 2026-03-26 00:08:02,167 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7058884937/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 01:09:06] 2026-03-26 00:08:02,167 | INFO     | extracted standard info from prmon json
[2026-03-26 01:09:06] 2026-03-26 00:08:02,167 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 01:09:06] 2026-03-26 00:08:02,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 01:09:06] 2026-03-26 00:08:02,167 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 01:09:06] 2026-03-26 00:08:02,167 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 01:09:06] 2026-03-26 00:08:02,168 | INFO     | fitting pss+swap vs Time
[2026-03-26 01:09:06] 2026-03-26 00:08:02,168 | INFO     | sum of square deviations: 4837300.0
[2026-03-26 01:09:06] 2026-03-26 00:08:02,168 | INFO     | sum of deviations: -12064275.0
[2026-03-26 01:09:06] 2026-03-26 00:08:02,168 | INFO     | mean x: 1774482814.0
[2026-03-26 01:09:06] 2026-03-26 00:08:02,168 | INFO     | mean y: 2723529.04
[2026-03-26 01:09:06] 2026-03-26 00:08:02,168 | INFO     | intersect: 4428301568.621967
[2026-03-26 01:09:06] 2026-03-26 00:08:02,168 | INFO     | chi2: 3.633999935638494e-05
[2026-03-26 01:09:06] 2026-03-26 00:08:02,168 | INFO     | current memory leak: -2.49 B/s (using 25 data points, chi2=0.00)
[2026-03-26 01:09:06] 2026-03-26 00:08:02,168 | INFO     | could have reported an average CPU frequency of 3606 MHz (5 samples)
[2026-03-26 01:09:06] 2026-03-26 00:08:02,169 | INFO     | ..............................
[2026-03-26 01:09:06] 2026-03-26 00:08:02,169 | INFO     | . Timing measurements:
[2026-03-26 01:09:06] 2026-03-26 00:08:02,169 | INFO     | . get job = 0 s
[2026-03-26 01:09:06] 2026-03-26 00:08:02,169 | INFO     | . initial setup = 4 s
[2026-03-26 01:09:06] 2026-03-26 00:08:02,169 | INFO     | . payload setup = 5 s
[2026-03-26 01:09:06] 2026-03-26 00:08:02,169 | INFO     | . stage-in = 0 s
[2026-03-26 01:09:06] 2026-03-26 00:08:02,169 | INFO     | . payload execution = 1903 s
[2026-03-26 01:09:06] 2026-03-26 00:08:02,169 | INFO     | . stage-out = 0 s
[2026-03-26 01:09:06] 2026-03-26 00:08:02,169 | INFO     | . log creation = 0 s
[2026-03-26 01:09:06] 2026-03-26 00:08:02,169 | INFO     | ..............................
[2026-03-26 01:09:06] 2026-03-26 00:08:02,212 | INFO     | 
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | job summary report
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | --------------------------------------------------
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | PanDA job id: 7058884937
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | task id: 48967094
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | errors: (none)
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | pilot state: finished 
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | transexitcode: 0
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | exeerrorcode: 0
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | exeerrordiag: 
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | exitcode: 0
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | exitmsg: OK
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | cpuconsumptiontime: 19935 s
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | nevents: 400
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | neventsw: 0
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | pid: 3700178
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | pgrp: 3700178
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | corecount: 12
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | event service: False
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | sizes: {0: 2280242, 11: 2280242, 1912: 2314241, 1913: 2314241, 1914: 2314467}
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | --------------------------------------------------
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | 
[2026-03-26 01:09:06] 2026-03-26 00:08:02,213 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/1
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,232 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 01:09:06] 2026-03-26 00:08:02,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,232 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 01:09:06] 2026-03-26 00:08:02,232 | INFO     | job 7058884937 has completed (purged errors)
[2026-03-26 01:09:06] 2026-03-26 00:08:02,232 | INFO     | overall cleanup function is called
[2026-03-26 01:09:06] 2026-03-26 00:08:03,239 | INFO     | --- collectZombieJob: --- 10, [3700178]
[2026-03-26 01:09:06] 2026-03-26 00:08:03,239 | INFO     | zombie collector waiting for pid 3700178
[2026-03-26 01:09:06] 2026-03-26 00:08:03,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 01:09:06] 2026-03-26 00:08:03,239 | INFO     | collected zombie processes
[2026-03-26 01:09:06] 2026-03-26 00:08:03,239 | INFO     | will attempt to kill all subprocesses of pid=3700178
[2026-03-26 01:09:06] 2026-03-26 00:08:03,586 | INFO     | process IDs to be killed: [3700178] (in reverse order)
[2026-03-26 01:09:06] 2026-03-26 00:08:03,730 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 01:09:06] 2026-03-26 00:08:03,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 01:09:06] 2026-03-26 00:08:03,757 | INFO     | did not find any defunct processes belonging to 3700178
[2026-03-26 01:09:06] 2026-03-26 00:08:03,780 | INFO     | did not find any defunct processes belonging to 3700178
[2026-03-26 01:09:06] 2026-03-26 00:08:03,780 | INFO     | ready for new job
[2026-03-26 01:09:06] 2026-03-26 00:08:03,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 01:09:06] 2026-03-26 00:08:03,781 | INFO     | **************************************
[2026-03-26 01:09:06] 2026-03-26 00:08:03,782 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 01:09:06] 2026-03-26 00:08:03,782 | INFO     | **************************************
[2026-03-26 01:09:06] 2026-03-26 00:08:03,782 | INFO     | 
[2026-03-26 01:09:06] 2026-03-26 00:08:03,787 | INFO     | architecture information:
[2026-03-26 01:09:06] 2026-03-26 00:08:03,788 | INFO     | executing command: cat /etc/os-release
[2026-03-26 01:09:06] 2026-03-26 00:08:03,802 | INFO     | cat /etc/os-release:
[2026-03-26 01:09:06] NAME="CentOS Linux"
[2026-03-26 01:09:06] VERSION="7 (Core)"
[2026-03-26 01:09:06] ID="centos"
[2026-03-26 01:09:06] ID_LIKE="rhel fedora"
[2026-03-26 01:09:06] VERSION_ID="7"
[2026-03-26 01:09:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 01:09:06] ANSI_COLOR="0;31"
[2026-03-26 01:09:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 01:09:06] HOME_URL="https://www.centos.org/"
[2026-03-26 01:09:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 01:09:06] 
[2026-03-26 01:09:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 01:09:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 01:09:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 01:09:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 01:09:06] 
[2026-03-26 01:09:06] 2026-03-26 00:08:03,802 | INFO     | **************************************
[2026-03-26 01:09:06] 2026-03-26 00:08:04,304 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/1
[2026-03-26 01:09:06] 2026-03-26 00:08:04,320 | INFO     | sufficient remaining disk space (149659058176 B)
[2026-03-26 01:09:06] 2026-03-26 00:08:04,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 01:09:06] 2026-03-26 00:08:04,320 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 01:09:06] 2026-03-26 00:08:04,320 | INFO     | update_server=False
[2026-03-26 01:09:06] 2026-03-26 00:08:04,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 01:09:06] 2026-03-26 00:08:04,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 01:09:06] 2026-03-26 00:08:04,321 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 01:09:06] 2026-03-26 00:08:04,321 | INFO     | aborting loop
[2026-03-26 01:09:06] 2026-03-26 00:08:04,859 | INFO     | all data control threads have been joined
[2026-03-26 01:09:06] 2026-03-26 00:08:05,326 | INFO     | [job] retrieve thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:05,327 | INFO     | [job] job monitor thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:05,367 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:05,477 | INFO     | all payload control threads have been joined
[2026-03-26 01:09:06] 2026-03-26 00:08:05,477 | INFO     | all job control threads have been joined
[2026-03-26 01:09:06] 2026-03-26 00:08:05,706 | INFO     | [payload] validate_post thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:05,764 | INFO     | [job] validate thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:05,865 | INFO     | [data] control thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:05,874 | INFO     | [payload] failed_post thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:05,919 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:05,952 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:06,270 | INFO     | [data] copytool_in thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:06,327 | INFO     | [data] copytool_out thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:06,483 | INFO     | [payload] control thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:06,483 | INFO     | [job] control thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:07,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 01:09:06] 2026-03-26 00:08:07,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 01:09:06] 2026-03-26 00:08:08,228 | INFO     | [job] queue monitor thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:11,730 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:14,433 | INFO     | job.realtimelogging is not enabled
[2026-03-26 01:09:06] 2026-03-26 00:08:15,439 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 01:09:06] 2026-03-26 00:08:35,177 | INFO     | PID=3694354 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-26 01:09:06] 2026-03-26 00:08:35,177 | INFO     | .. there are 12 such processes running
[2026-03-26 01:09:06] 2026-03-26 00:08:35,178 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 01:09:06] 2026-03-26 00:08:35,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 01:09:06] 2026-03-26 00:08:35,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 01:09:06] 2026-03-26 00:08:59,250 | INFO     | [monitor] cgroup control has ended
[2026-03-26 01:09:06] 2026-03-26 00:09:01,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22479185868608)>', '<ExcThread(monitor, started 22478945789696)>']
[2026-03-26 01:09:06] 2026-03-26 00:09:01,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 01:09:06] 2026-03-26 00:09:01,299 | INFO     | [monitor] control thread has ended
[2026-03-26 01:09:06] 2026-03-26 00:09:06,054 | INFO     | all workflow threads have been joined
[2026-03-26 01:09:06] 2026-03-26 00:09:06,054 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 01:09:06] 2026-03-26 00:09:06,054 | INFO     | traces error code: 0
[2026-03-26 01:09:06] 2026-03-26 00:09:06,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 01:09:06] 2026-03-26 00:09:06,197 [wrapper] ==== pilot stdout END ====
[2026-03-26 01:09:06] 2026-03-26 00:09:06,200 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 01:09:06] 2026-03-26 00:09:06,205 [wrapper] pilotpid: 3694354
[2026-03-26 01:09:06] 2026-03-26 00:09:06,206 [wrapper] Pilot exit status: 0
[2026-03-26 01:09:06] 2026-03-26 00:09:06,214 [wrapper] pandaids: 7058884937
[2026-03-26 01:09:06] 2026-03-26 00:09:06,318 [wrapper] cleanup supervisor_pilot 3821340 3694355
[2026-03-26 01:09:06] 2026-03-26 00:09:06,320 [wrapper] Test setup, not cleaning
[2026-03-26 01:09:06] 2026-03-26 00:09:06,322 [wrapper] apfmon messages muted
[2026-03-26 01:09:06] 2026-03-26 00:09:06,324 [wrapper] ==== wrapper stdout END ====
[2026-03-26 01:09:06] 2026-03-26 00:09:06,326 [wrapper] ==== wrapper stderr END ====
[2026-03-26 01:09:06]  *** Error codes and diagnostics ***
[2026-03-26 01:09:06]     "exeErrorCode": 0,
[2026-03-26 01:09:06]     "exeErrorDiag": "",
[2026-03-26 01:09:06]     "pilotErrorCode": 0,
[2026-03-26 01:09:06]     "pilotErrorDiag": "",
[2026-03-26 01:09:06]  *** Listing of results directory ***
[2026-03-26 01:09:06] total 416968
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc    585013 Mar 23 16:45 pilot3.tar.gz
[2026-03-26 01:09:06] -rwx------. 1 boinc boinc     36322 Mar 23 16:49 runpilot2-wrapper.sh
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc      5111 Mar 23 16:52 queuedata.json
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc       100 Mar 25 23:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 01:09:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar 25 23:58 run_atlas
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc       105 Mar 25 23:58 job.xml
[2026-03-26 01:09:06] -rw-r--r--. 2 boinc boinc 219713275 Mar 26 00:35 EVNT.48967092._000509.pool.root.1
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc      6712 Mar 26 00:35 init_data.xml
[2026-03-26 01:09:06] -rw-r--r--. 2 boinc boinc     15845 Mar 26 00:35 start_atlas.sh
[2026-03-26 01:09:06] drwxrwx--x. 2 boinc boinc      4096 Mar 26 00:35 shared
[2026-03-26 01:09:06] -rw-r--r--. 2 boinc boinc    597539 Mar 26 00:35 input.tar.gz
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc         0 Mar 26 00:35 boinc_lockfile
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc      2601 Mar 26 00:35 pandaJob.out
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc   1012179 Mar 26 00:35 agis_schedconf.cvmfs.json
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc   1511579 Mar 26 00:35 agis_ddmendpoints.agis.ALL.json
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc       442 Mar 26 00:35 workernode_map.json
[2026-03-26 01:09:06] drwx------. 5 boinc boinc      4096 Mar 26 00:35 pilot3
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc 201967000 Mar 26 01:07 HITS.48967094._012738.pool.root.1
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc       529 Mar 26 01:07 boinc_task_state.xml
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc      1027 Mar 26 01:07 memory_monitor_summary.json
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc    355026 Mar 26 01:08 log.48967094._012738.job.log.tgz.1
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc      6355 Mar 26 01:08 heartbeat.json
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc        95 Mar 26 01:08 pilot_heartbeat.json
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc      8192 Mar 26 01:08 boinc_mmap_file
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc        27 Mar 26 01:08 wrapper_checkpoint.txt
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc      4903 Mar 26 01:09 pilotlog.txt
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc    319113 Mar 26 01:09 log.48967094._012738.job.log.1
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc       357 Mar 26 01:09 output.list
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc       620 Mar 26 01:09 runtime_log
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc    696320 Mar 26 01:09 result.tar.gz
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc      9223 Mar 26 01:09 runtime_log.err
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc       658 Mar 26 01:09 TBaLDmOiwO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmFwAMDmeKYH6m.diag
[2026-03-26 01:09:06] -rw-r--r--. 1 boinc boinc     21034 Mar 26 01:09 stderr.txt
[2026-03-26 01:09:06] HITS file was successfully produced:
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc 201967000 Mar 26 01:07 shared/HITS.pool.root.1
[2026-03-26 01:09:06]  *** Contents of shared directory: ***
[2026-03-26 01:09:06] total 413088
[2026-03-26 01:09:06] -rw-r--r--. 2 boinc boinc 219713275 Mar 26 00:35 ATLAS.root_0
[2026-03-26 01:09:06] -rw-r--r--. 2 boinc boinc     15845 Mar 26 00:35 start_atlas.sh
[2026-03-26 01:09:06] -rw-r--r--. 2 boinc boinc    597539 Mar 26 00:35 input.tar.gz
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc 201967000 Mar 26 01:07 HITS.pool.root.1
[2026-03-26 01:09:06] -rw-------. 1 boinc boinc    696320 Mar 26 01:09 result.tar.gz
01:09:07 (3689485): run_atlas exited; CPU time 19993.993722
01:09:07 (3689485): called boinc_finish(0)

</stderr_txt>
]]>

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