Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:36:00 (3929643): wrapper (7.7.26015): starting
01:36:00 (3929643): wrapper: running run_atlas (--nthreads 12)
[2026-03-29 01:36:00] Arguments: --nthreads 12
[2026-03-29 01:36:00] Threads: 12
[2026-03-29 01:36:00] Checking for CVMFS
[2026-03-29 01:36:00] No cvmfs_config command found, will try listing directly
[2026-03-29 01:36:00] CVMFS is ok
[2026-03-29 01:36:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 01:36:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-29 01:36:00] Further information can be found at the LHC@home message board.
[2026-03-29 01:36:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 01:36:00] Checking for apptainer binary...
[2026-03-29 01:36:00] which: no apptainer in ((null))
[2026-03-29 01:36:00] apptainer is not installed, using version from CVMFS
[2026-03-29 01:36:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 01:36:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-29 01:36:00] apptainer works
[2026-03-29 01:36:00] Set ATHENA_PROC_NUMBER=12
[2026-03-29 01:36:00] Set ATHENA_CORE_NUMBER=12
[2026-03-29 01:36:00] Starting ATLAS job with PandaID=7063721219
[2026-03-29 01:36:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 03:54:25]  *** The last 200 lines of the pilot log: ***
[2026-03-29 03:54:25]  filesize=385999
[2026-03-29 03:54:25]  filetype=log
[2026-03-29 03:54:25]  guid=78fd0d7c-4cd4-4074-ba27-0e0f7cccc735
[2026-03-29 03:54:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-29 03:54:25]  is_altstaged=None
[2026-03-29 03:54:25]  is_tar=False
[2026-03-29 03:54:25]  lfn=log.49181484._000317.job.log.tgz.1
[2026-03-29 03:54:25]  mtime=0
[2026-03-29 03:54:25]  protocol_id=None
[2026-03-29 03:54:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-29 03:54:25]  replicas=None
[2026-03-29 03:54:25]  scope=mc23_13p6TeV
[2026-03-29 03:54:25]  status=None
[2026-03-29 03:54:25]  status_code=0
[2026-03-29 03:54:25]  storage_token=
[2026-03-29 03:54:25]  surl=/var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7063721219/log.49181484._000317.job.log.tgz.1
[2026-03-29 03:54:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/11/log.49181484._000317.job.log.tgz.1
[2026-03-29 03:54:25]  workdir=None
[2026-03-29 03:54:25] ]
[2026-03-29 03:54:25] 2026-03-29 01:53:37,580 | INFO     | transferring file log.49181484._000317.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7063721219/log.49181484._000317.job.log.tgz.1 to /var/lib/
[2026-03-29 03:54:25] 2026-03-29 01:53:37,580 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7063721219/log.49181484._000317.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/10/
[2026-03-29 03:54:25] 2026-03-29 01:53:37,594 | INFO     | adding to output.list: log.49181484._000317.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/11/log.49181484._000317.job.log.tg
[2026-03-29 03:54:25] 2026-03-29 01:53:37,595 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-29 03:54:25] 2026-03-29 01:53:37,595 | INFO     | summary of transferred files:
[2026-03-29 03:54:25] 2026-03-29 01:53:37,595 | INFO     |  -- lfn=log.49181484._000317.job.log.tgz.1, status_code=0, status=transferred
[2026-03-29 03:54:25] 2026-03-29 01:53:37,595 | INFO     | stage-out finished correctly
[2026-03-29 03:54:25] 2026-03-29 01:53:38,673 | INFO     | time since job start (4646s) is within the limit (345600.0s)
[2026-03-29 03:54:25] 2026-03-29 01:53:38,716 | INFO     | monitor loop #339: job 0:7063721219 is in state 'finished'
[2026-03-29 03:54:25] 2026-03-29 01:53:38,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-29 03:54:25] 2026-03-29 01:53:40,348 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-29 03:54:25] 2026-03-29 01:53:40,397 | INFO     | job 7063721219 has state=finished
[2026-03-29 03:54:25] 2026-03-29 01:53:40,397 | INFO     | preparing for final server update for job 7063721219 in state='finished'
[2026-03-29 03:54:25] 2026-03-29 01:53:40,397 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7063721219/jobReport.json
[2026-03-29 03:54:25] 2026-03-29 01:53:40,399 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/10/workernode_map.json
[2026-03-29 03:54:25] 2026-03-29 01:53:40,399 | INFO     | this job has now completed (state=finished)
[2026-03-29 03:54:25] 2026-03-29 01:53:40,399 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 03:54:25] 2026-03-29 01:53:40,399 | INFO     | log transfer has been attempted: DONE
[2026-03-29 03:54:25] 2026-03-29 01:53:40,399 | INFO     | job 7063721219 has finished - writing final server update
[2026-03-29 03:54:25] 2026-03-29 01:53:40,400 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3854349/.job.ad'
[2026-03-29 03:54:25] 2026-03-29 01:53:40,400 | INFO     | total number of processed events: 400 (read)
[2026-03-29 03:54:25] 2026-03-29 01:53:40,418 | INFO     | using path: /var/lib/boinc/var/slot60/slots/10/PanDA_Pilot-7063721219/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 03:54:25] 2026-03-29 01:53:40,419 | INFO     | extracted standard info from prmon json
[2026-03-29 03:54:25] 2026-03-29 01:53:40,419 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 03:54:25] 2026-03-29 01:53:40,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 03:54:25] 2026-03-29 01:53:40,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 03:54:25] 2026-03-29 01:53:40,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 03:54:25] 2026-03-29 01:53:40,421 | INFO     | fitting pss+swap vs Time
[2026-03-29 03:54:25] 2026-03-29 01:53:40,421 | INFO     | sum of square deviations: 101843770.0
[2026-03-29 03:54:25] 2026-03-29 01:53:40,421 | INFO     | sum of deviations: -43776162.000000015
[2026-03-29 03:54:25] 2026-03-29 01:53:40,421 | INFO     | mean x: 1774746974.0
[2026-03-29 03:54:25] 2026-03-29 01:53:40,421 | INFO     | mean y: 2712576.144927536
[2026-03-29 03:54:25] 2026-03-29 01:53:40,421 | INFO     | intersect: 765563470.6359092
[2026-03-29 03:54:25] 2026-03-29 01:53:40,421 | INFO     | chi2: 0.0005990036838315466
[2026-03-29 03:54:25] 2026-03-29 01:53:40,421 | INFO     | current memory leak: -0.43 B/s (using 69 data points, chi2=0.00)
[2026-03-29 03:54:25] 2026-03-29 01:53:40,421 | INFO     | could have reported an average CPU frequency of 3554 MHz (6 samples)
[2026-03-29 03:54:25] 2026-03-29 01:53:40,421 | INFO     | ..............................
[2026-03-29 03:54:25] 2026-03-29 01:53:40,422 | INFO     | . Timing measurements:
[2026-03-29 03:54:25] 2026-03-29 01:53:40,422 | INFO     | . get job = 0 s
[2026-03-29 03:54:25] 2026-03-29 01:53:40,422 | INFO     | . initial setup = 4 s
[2026-03-29 03:54:25] 2026-03-29 01:53:40,422 | INFO     | . payload setup = 7 s
[2026-03-29 03:54:25] 2026-03-29 01:53:40,422 | INFO     | . stage-in = 0 s
[2026-03-29 03:54:25] 2026-03-29 01:53:40,422 | INFO     | . payload execution = 4622 s
[2026-03-29 03:54:25] 2026-03-29 01:53:40,422 | INFO     | . stage-out = 0 s
[2026-03-29 03:54:25] 2026-03-29 01:53:40,422 | INFO     | . log creation = 0 s
[2026-03-29 03:54:25] 2026-03-29 01:53:40,422 | INFO     | ..............................
[2026-03-29 03:54:25] 2026-03-29 01:53:40,473 | INFO     | 
[2026-03-29 03:54:25] 2026-03-29 01:53:40,473 | INFO     | job summary report
[2026-03-29 03:54:25] 2026-03-29 01:53:40,473 | INFO     | --------------------------------------------------
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | PanDA job id: 7063721219
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | task id: 49181484
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | errors: (none)
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | pilot state: finished 
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | transexitcode: 0
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | exeerrorcode: 0
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | exeerrordiag: 
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | exitcode: 0
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | exitmsg: OK
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | cpuconsumptiontime: 50670 s
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | nevents: 400
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | neventsw: 0
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | pid: 3940051
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | pgrp: 3940051
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | corecount: 12
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | event service: False
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | sizes: {0: 2280271, 11: 2280271, 4632: 2306584, 4633: 2315661, 4636: 2315855}
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | --------------------------------------------------
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | 
[2026-03-29 03:54:25] 2026-03-29 01:53:40,474 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/10
[2026-03-29 03:54:25] 2026-03-29 01:53:40,496 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 03:54:25] 2026-03-29 01:53:40,497 | INFO     | job 7063721219 has completed (purged errors)
[2026-03-29 03:54:25] 2026-03-29 01:53:40,498 | INFO     | overall cleanup function is called
[2026-03-29 03:54:25] 2026-03-29 01:53:41,505 | INFO     | --- collectZombieJob: --- 10, [3940051]
[2026-03-29 03:54:25] 2026-03-29 01:53:41,505 | INFO     | zombie collector waiting for pid 3940051
[2026-03-29 03:54:25] 2026-03-29 01:53:41,505 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 03:54:25] 2026-03-29 01:53:41,505 | INFO     | collected zombie processes
[2026-03-29 03:54:25] 2026-03-29 01:53:41,505 | INFO     | will attempt to kill all subprocesses of pid=3940051
[2026-03-29 03:54:25] 2026-03-29 01:53:41,874 | INFO     | process IDs to be killed: [3940051] (in reverse order)
[2026-03-29 03:54:25] 2026-03-29 01:53:42,042 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 03:54:25] 2026-03-29 01:53:42,043 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 03:54:25] 2026-03-29 01:53:42,069 | INFO     | did not find any defunct processes belonging to 3940051
[2026-03-29 03:54:25] 2026-03-29 01:53:42,092 | INFO     | did not find any defunct processes belonging to 3940051
[2026-03-29 03:54:25] 2026-03-29 01:53:42,092 | INFO     | ready for new job
[2026-03-29 03:54:25] 2026-03-29 01:53:42,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 03:54:25] 2026-03-29 01:53:42,093 | INFO     | **************************************
[2026-03-29 03:54:25] 2026-03-29 01:53:42,094 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 03:54:25] 2026-03-29 01:53:42,094 | INFO     | **************************************
[2026-03-29 03:54:25] 2026-03-29 01:53:42,094 | INFO     | 
[2026-03-29 03:54:25] 2026-03-29 01:53:42,100 | INFO     | architecture information:
[2026-03-29 03:54:25] 2026-03-29 01:53:42,100 | INFO     | executing command: cat /etc/os-release
[2026-03-29 03:54:25] 2026-03-29 01:53:42,115 | INFO     | cat /etc/os-release:
[2026-03-29 03:54:25] NAME="CentOS Linux"
[2026-03-29 03:54:25] VERSION="7 (Core)"
[2026-03-29 03:54:25] ID="centos"
[2026-03-29 03:54:25] ID_LIKE="rhel fedora"
[2026-03-29 03:54:25] VERSION_ID="7"
[2026-03-29 03:54:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 03:54:25] ANSI_COLOR="0;31"
[2026-03-29 03:54:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 03:54:25] HOME_URL="https://www.centos.org/"
[2026-03-29 03:54:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 03:54:25] 
[2026-03-29 03:54:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 03:54:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 03:54:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 03:54:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 03:54:25] 
[2026-03-29 03:54:25] 2026-03-29 01:53:42,115 | INFO     | **************************************
[2026-03-29 03:54:25] 2026-03-29 01:53:42,618 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/10
[2026-03-29 03:54:25] 2026-03-29 01:53:42,635 | INFO     | sufficient remaining disk space (161115799552 B)
[2026-03-29 03:54:25] 2026-03-29 01:53:42,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 03:54:25] 2026-03-29 01:53:42,635 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 03:54:25] 2026-03-29 01:53:42,635 | INFO     | update_server=False
[2026-03-29 03:54:25] 2026-03-29 01:53:42,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 03:54:25] 2026-03-29 01:53:42,636 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 03:54:25] 2026-03-29 01:53:42,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 03:54:25] 2026-03-29 01:53:42,637 | INFO     | aborting loop
[2026-03-29 03:54:25] 2026-03-29 01:53:42,646 | INFO     | all payload control threads have been joined
[2026-03-29 03:54:25] 2026-03-29 01:53:43,152 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 03:54:25] 2026-03-29 01:53:43,226 | INFO     | all data control threads have been joined
[2026-03-29 03:54:25] 2026-03-29 01:53:43,641 | INFO     | [job] retrieve thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:43,642 | INFO     | [job] job monitor thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:43,652 | INFO     | [payload] control thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:43,817 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:44,048 | INFO     | all job control threads have been joined
[2026-03-29 03:54:25] 2026-03-29 01:53:44,174 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:44,231 | INFO     | [data] control thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:44,243 | INFO     | [payload] validate_post thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:44,394 | INFO     | [job] validate thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:44,482 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:44,885 | INFO     | [data] copytool_in thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:44,953 | INFO     | [payload] failed_post thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:45,050 | INFO     | [job] control thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:45,081 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:45,157 | INFO     | [data] copytool_out thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:45,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 03:54:25] 2026-03-29 01:53:46,485 | INFO     | [job] queue monitor thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:53:46,642 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 03:54:25] 2026-03-29 01:54:12,182 | INFO     | PID=3934212 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-29 03:54:25] 2026-03-29 01:54:12,183 | INFO     | .. there are 17 such processes running
[2026-03-29 03:54:25] 2026-03-29 01:54:12,183 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 03:54:25] 2026-03-29 01:54:12,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 03:54:25] 2026-03-29 01:54:12,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 03:54:25] 2026-03-29 01:54:19,840 | INFO     | [monitor] cgroup control has ended
[2026-03-29 03:54:25] 2026-03-29 01:54:20,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22738028808000)>', '<ExcThread(monitor, started 22737782568704)>']
[2026-03-29 03:54:25] 2026-03-29 01:54:21,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 03:54:25] 2026-03-29 01:54:21,228 | INFO     | [monitor] control thread has ended
[2026-03-29 03:54:25] 2026-03-29 01:54:25,375 | INFO     | all workflow threads have been joined
[2026-03-29 03:54:25] 2026-03-29 01:54:25,375 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 03:54:25] 2026-03-29 01:54:25,375 | INFO     | traces error code: 0
[2026-03-29 03:54:25] 2026-03-29 01:54:25,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 03:54:25] 2026-03-29 01:54:25,536 [wrapper] ==== pilot stdout END ====
[2026-03-29 03:54:25] 2026-03-29 01:54:25,538 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 03:54:25] 2026-03-29 01:54:25,540 [wrapper] pilotpid: 3934212
[2026-03-29 03:54:25] 2026-03-29 01:54:25,544 [wrapper] Pilot exit status: 0
[2026-03-29 03:54:25] 2026-03-29 01:54:25,551 [wrapper] pandaids: 7063721219
[2026-03-29 03:54:25] 2026-03-29 01:54:25,648 [wrapper] cleanup supervisor_pilot  235627 3934213
[2026-03-29 03:54:25] 2026-03-29 01:54:25,651 [wrapper] Test setup, not cleaning
[2026-03-29 03:54:25] 2026-03-29 01:54:25,653 [wrapper] apfmon messages muted
[2026-03-29 03:54:25] 2026-03-29 01:54:25,655 [wrapper] ==== wrapper stdout END ====
[2026-03-29 03:54:25] 2026-03-29 01:54:25,657 [wrapper] ==== wrapper stderr END ====
[2026-03-29 03:54:25]  *** Error codes and diagnostics ***
[2026-03-29 03:54:25]     "exeErrorCode": 0,
[2026-03-29 03:54:25]     "exeErrorDiag": "",
[2026-03-29 03:54:25]     "pilotErrorCode": 0,
[2026-03-29 03:54:25]     "pilotErrorDiag": "",
[2026-03-29 03:54:25]  *** Listing of results directory ***
[2026-03-29 03:54:25] total 474036
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc    585013 Mar 24 02:39 pilot3.tar.gz
[2026-03-29 03:54:25] -rwx------. 1 boinc boinc     36322 Mar 24 02:40 runpilot2-wrapper.sh
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc      5111 Mar 24 02:40 queuedata.json
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc       100 Mar 29 01:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 03:54:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar 29 01:35 run_atlas
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc       105 Mar 29 01:35 job.xml
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc      6709 Mar 29 01:36 init_data.xml
[2026-03-29 03:54:25] -rw-r--r--. 2 boinc boinc 241392175 Mar 29 01:36 EVNT.49135163._000005.pool.root.1
[2026-03-29 03:54:25] -rw-r--r--. 2 boinc boinc     15845 Mar 29 01:36 start_atlas.sh
[2026-03-29 03:54:25] drwxrwx--x. 2 boinc boinc      4096 Mar 29 01:36 shared
[2026-03-29 03:54:25] -rw-r--r--. 2 boinc boinc    597547 Mar 29 01:36 input.tar.gz
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc         0 Mar 29 01:36 boinc_lockfile
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc      2618 Mar 29 01:36 pandaJob.out
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc   1003389 Mar 29 01:36 agis_schedconf.cvmfs.json
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc   1511579 Mar 29 01:36 agis_ddmendpoints.agis.ALL.json
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc       443 Mar 29 01:36 workernode_map.json
[2026-03-29 03:54:25] drwx------. 5 boinc boinc      4096 Mar 29 01:36 pilot3
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc 237938975 Mar 29 03:53 HITS.49181484._000317.pool.root.1
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc       529 Mar 29 03:53 boinc_task_state.xml
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc      1028 Mar 29 03:53 memory_monitor_summary.json
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc    385999 Mar 29 03:53 log.49181484._000317.job.log.tgz.1
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc      6347 Mar 29 03:53 heartbeat.json
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc      8192 Mar 29 03:54 boinc_mmap_file
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc        27 Mar 29 03:54 wrapper_checkpoint.txt
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc        95 Mar 29 03:54 pilot_heartbeat.json
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc      4831 Mar 29 03:54 pilotlog.txt
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc    688108 Mar 29 03:54 log.49181484._000317.job.log.1
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc       357 Mar 29 03:54 output.list
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc       620 Mar 29 03:54 runtime_log
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc   1095680 Mar 29 03:54 result.tar.gz
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc      9223 Mar 29 03:54 runtime_log.err
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc       663 Mar 29 03:54 lBxNDmbv5O9n9Rq4apOajLDm4fhM0noT9bVoINGKDmYNFKDmQ7fZgn.diag
[2026-03-29 03:54:25] -rw-r--r--. 1 boinc boinc     21093 Mar 29 03:54 stderr.txt
[2026-03-29 03:54:25] HITS file was successfully produced:
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc 237938975 Mar 29 03:53 shared/HITS.pool.root.1
[2026-03-29 03:54:25]  *** Contents of shared directory: ***
[2026-03-29 03:54:25] total 469776
[2026-03-29 03:54:25] -rw-r--r--. 2 boinc boinc 241392175 Mar 29 01:36 ATLAS.root_0
[2026-03-29 03:54:25] -rw-r--r--. 2 boinc boinc     15845 Mar 29 01:36 start_atlas.sh
[2026-03-29 03:54:25] -rw-r--r--. 2 boinc boinc    597547 Mar 29 01:36 input.tar.gz
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc 237938975 Mar 29 03:53 HITS.pool.root.1
[2026-03-29 03:54:25] -rw-------. 1 boinc boinc   1095680 Mar 29 03:54 result.tar.gz
03:54:27 (3929643): run_atlas exited; CPU time 50824.452840
03:54:27 (3929643): called boinc_finish(0)

</stderr_txt>
]]>

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