Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:43:13 (855562): wrapper (7.7.26015): starting
17:43:13 (855562): wrapper: running run_atlas (--nthreads 3)
[2026-03-25 17:43:13] Arguments: --nthreads 3
[2026-03-25 17:43:13] Threads: 3
[2026-03-25 17:43:13] Checking for CVMFS
[2026-03-25 17:43:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 17:43:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 17:43:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 17:43:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 17:43:14] 2.9.2.0 776647 525 55388 157690 3 50 27646805 36864000 0 130560 0 164014 99.981 18906 5440 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-25 17:43:14] CVMFS is ok
[2026-03-25 17:43:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 17:43:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 17:43:14] Further information can be found at the LHC@home message board.
[2026-03-25 17:43:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 17:43:14] Checking for apptainer binary...
[2026-03-25 17:43:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 17:43:14] Running /usr/bin/apptainer --version
[2026-03-25 17:43:14] apptainer version 1.4.1-1.1
[2026-03-25 17:43:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 17:43:14] atlasA115
[2026-03-25 17:43:14] apptainer works
[2026-03-25 17:43:14] Set ATHENA_PROC_NUMBER=3
[2026-03-25 17:43:14] Set ATHENA_CORE_NUMBER=3
[2026-03-25 17:43:14] Starting ATLAS job with PandaID=7058884896
[2026-03-25 17:43:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:32:56 (869401): wrapper (7.7.26015): starting
18:32:56 (869401): wrapper: running run_atlas (--nthreads 3)
[2026-03-25 18:32:56] Arguments: --nthreads 3
[2026-03-25 18:32:56] Threads: 3
[2026-03-25 18:32:56] This job has been restarted, cleaning up previous attempt
[2026-03-25 18:32:56] Checking for CVMFS
[2026-03-25 18:32:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 18:32:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 18:32:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 18:32:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 18:32:57] 2.9.2.0 869526 0 29552 157691 3 1 27663056 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-25 18:32:57] CVMFS is ok
[2026-03-25 18:32:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 18:32:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 18:32:57] Further information can be found at the LHC@home message board.
[2026-03-25 18:32:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 18:32:57] Checking for apptainer binary...
[2026-03-25 18:32:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 18:32:57] Running /usr/bin/apptainer --version
[2026-03-25 18:32:57] apptainer version 1.4.1-1.1
[2026-03-25 18:32:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 18:32:57] atlasA115
[2026-03-25 18:32:57] apptainer works
[2026-03-25 18:32:57] Set ATHENA_PROC_NUMBER=3
[2026-03-25 18:32:57] Set ATHENA_CORE_NUMBER=3
[2026-03-25 18:32:57] Starting ATLAS job with PandaID=7058884896
[2026-03-25 18:32:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 20:18:18]  *** The last 200 lines of the pilot log: ***
[2026-03-25 20:18:18] 2026-03-25 19:17:25,236 | INFO     | update_server=False
[2026-03-25 20:18:18] 2026-03-25 19:17:25,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 20:18:18] 2026-03-25 19:17:25,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 20:18:18] 2026-03-25 19:17:25,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 20:18:18] 2026-03-25 19:17:25,236 | INFO     | aborting loop
[2026-03-25 20:18:18] 2026-03-25 19:17:25,346 | INFO     | all payload control threads have been joined
[2026-03-25 20:18:18] 2026-03-25 19:17:25,505 | INFO     | all data control threads have been joined
[2026-03-25 20:18:18] 2026-03-25 19:17:26,241 | INFO     | [job] retrieve thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:26,241 | INFO     | [job] queue monitor thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:26,242 | INFO     | [job] job monitor thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:26,348 | INFO     | [data] copytool_in thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:26,351 | INFO     | [payload] control thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:26,386 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:26,510 | INFO     | [data] control thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:26,714 | INFO     | [payload] validate_post thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:26,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 20:18:18] 2026-03-25 19:17:26,920 | INFO     | all job control threads have been joined
[2026-03-25 20:18:18] 2026-03-25 19:17:27,514 | INFO     | [payload] failed_post thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:27,671 | INFO     | [job] validate thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:27,693 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:27,720 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:27,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 20:18:18] 2026-03-25 19:17:27,925 | INFO     | [job] control thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:28,737 | INFO     | [data] copytool_out thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:31,877 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:35,394 | INFO     | job.realtimelogging is not enabled
[2026-03-25 20:18:18] 2026-03-25 19:17:36,400 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 20:18:18] 2026-03-25 19:17:55,549 | INFO     | PID=873599 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-25 20:18:18] 2026-03-25 19:17:55,550 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 20:18:18] 2026-03-25 19:17:55,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 20:18:18] 2026-03-25 19:17:55,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 20:18:18] 2026-03-25 19:18:04,396 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-25 20:18:18] 2026-03-25 19:18:12,218 | INFO     | [monitor] cgroup control has ended
[2026-03-25 20:18:18] 2026-03-25 19:18:13,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139902109022016)>', '<ExcThread(monitor, started 139901605488384)>']
[2026-03-25 20:18:18] 2026-03-25 19:18:13,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 20:18:18] 2026-03-25 19:18:13,641 | INFO     | [monitor] control thread has ended
[2026-03-25 20:18:18] 2026-03-25 19:18:18,273 | INFO     | all workflow threads have been joined
[2026-03-25 20:18:18] 2026-03-25 19:18:18,273 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 20:18:18] 2026-03-25 19:18:18,274 | INFO     | traces error code: 0
[2026-03-25 20:18:18] 2026-03-25 19:18:18,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 20:18:18] 2026-03-25 19:18:18,322 [wrapper] ==== pilot stdout END ====
[2026-03-25 20:18:18] 2026-03-25 19:18:18,324 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 20:18:18] 2026-03-25 19:18:18,326 [wrapper] pilotpid: 873599
[2026-03-25 20:18:18] 2026-03-25 19:18:18,328 [wrapper] Pilot exit status: 0
[2026-03-25 20:18:18] 2026-03-25 19:18:18,335 [wrapper] pandaids: 7058884896 7058884896
[2026-03-25 20:18:18] 2026-03-25 19:18:18,351 [wrapper] cleanup supervisor_pilot  882011 873600
[2026-03-25 20:18:18] 2026-03-25 19:18:18,353 [wrapper] Test setup, not cleaning
[2026-03-25 20:18:18] 2026-03-25 19:18:18,356 [wrapper] apfmon messages muted
[2026-03-25 20:18:18] 2026-03-25 19:18:18,358 [wrapper] ==== wrapper stdout END ====
[2026-03-25 20:18:18] 2026-03-25 19:18:18,360 [wrapper] ==== wrapper stderr END ====
[2026-03-25 20:18:18]  *** Error codes and diagnostics ***
[2026-03-25 20:18:18]     "exeErrorCode": 0,
[2026-03-25 20:18:18]     "exeErrorDiag": "",
[2026-03-25 20:18:18]     "pilotErrorCode": 0,
[2026-03-25 20:18:18]     "pilotErrorDiag": "",
[2026-03-25 20:18:18]  *** Listing of results directory ***
[2026-03-25 20:18:18] total 638684
[2026-03-25 20:18:18] drwx------ 5 boinc boinc      4096 Mar 10 17:00 pilot3
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc    585013 Mar 23 16:45 pilot3.tar.gz
[2026-03-25 20:18:18] -rwx------ 1 boinc boinc     36322 Mar 23 16:49 runpilot2-wrapper.sh
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc      5111 Mar 23 16:52 queuedata.json
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc       100 Mar 25 17:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 20:18:18] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 17:43 run_atlas
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc       105 Mar 25 17:43 job.xml
[2026-03-25 20:18:18] -rw-r--r-- 3 boinc boinc 220787426 Mar 25 17:43 EVNT.48967092._000508.pool.root.1
[2026-03-25 20:18:18] -rw-r--r-- 3 boinc boinc 220787426 Mar 25 17:43 ATLAS.root_0
[2026-03-25 20:18:18] -rw-r--r-- 2 boinc boinc    597535 Mar 25 17:43 input.tar.gz
[2026-03-25 20:18:18] -rw-r--r-- 2 boinc boinc     15845 Mar 25 17:43 start_atlas.sh
[2026-03-25 20:18:18] drwxrwx--x 2 boinc boinc      4096 Mar 25 17:43 shared
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc         0 Mar 25 17:43 boinc_setup_complete
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc         0 Mar 25 17:43 boinc_lockfile
[2026-03-25 20:18:18] -rw------- 1 boinc boinc   1511579 Mar 25 17:43 agis_ddmendpoints.agis.ALL.json
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc      6447 Mar 25 18:32 init_data.xml
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc      2601 Mar 25 18:32 pandaJob.out
[2026-03-25 20:18:18] -rw------- 1 boinc boinc   1012131 Mar 25 18:33 agis_schedconf.cvmfs.json
[2026-03-25 20:18:18] -rw------- 1 boinc boinc       430 Mar 25 18:33 workernode_map.json
[2026-03-25 20:18:18] -rw------- 1 boinc boinc 206160771 Mar 25 20:17 HITS.48967094._012697.pool.root.1
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc       529 Mar 25 20:17 boinc_task_state.xml
[2026-03-25 20:18:18] -rw------- 1 boinc boinc      1020 Mar 25 20:17 memory_monitor_summary.json
[2026-03-25 20:18:18] -rw------- 1 boinc boinc    261676 Mar 25 20:17 log.48967094._012697.job.log.tgz.1
[2026-03-25 20:18:18] -rw------- 1 boinc boinc      6322 Mar 25 20:17 heartbeat.json
[2026-03-25 20:18:18] -rw------- 1 boinc boinc        96 Mar 25 20:17 pilot_heartbeat.json
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc        27 Mar 25 20:18 wrapper_checkpoint.txt
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc      8192 Mar 25 20:18 boinc_mmap_file
[2026-03-25 20:18:18] -rw------- 1 boinc boinc      4819 Mar 25 20:18 pilotlog.txt
[2026-03-25 20:18:18] -rw------- 1 boinc boinc    904357 Mar 25 20:18 log.48967094._012697.job.log.1
[2026-03-25 20:18:18] -rw------- 1 boinc boinc       357 Mar 25 20:18 output.list
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc       620 Mar 25 20:18 runtime_log
[2026-03-25 20:18:18] -rw------- 1 boinc boinc   1187840 Mar 25 20:18 result.tar.gz
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc      8996 Mar 25 20:18 runtime_log.err
[2026-03-25 20:18:18] -rw------- 1 boinc boinc       785 Mar 25 20:18 BXjNDmBiwO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbvAMDm5R8Cwm.diag
[2026-03-25 20:18:18] -rw-r--r-- 1 boinc boinc      9721 Mar 25 20:18 stderr.txt
[2026-03-25 20:18:18] HITS file was successfully produced:
[2026-03-25 20:18:18] -rw------- 1 boinc boinc 206160771 Mar 25 20:17 shared/HITS.pool.root.1
[2026-03-25 20:18:18]  *** Contents of shared directory: ***
[2026-03-25 20:18:18] total 418716
[2026-03-25 20:18:18] -rw-r--r-- 3 boinc boinc 220787426 Mar 25 17:43 ATLAS.root_0
[2026-03-25 20:18:18] -rw-r--r-- 2 boinc boinc    597535 Mar 25 17:43 input.tar.gz
[2026-03-25 20:18:18] -rw-r--r-- 2 boinc boinc     15845 Mar 25 17:43 start_atlas.sh
[2026-03-25 20:18:18] -rw------- 1 boinc boinc 206160771 Mar 25 20:17 HITS.pool.root.1
[2026-03-25 20:18:18] -rw------- 1 boinc boinc   1187840 Mar 25 20:18 result.tar.gz
20:18:40 (869401): run_atlas exited; CPU time 17809.359323
20:18:40 (869401): called boinc_finish(0)

</stderr_txt>
]]>

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