Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:24:13 (220012): wrapper (7.7.26015): starting
04:24:13 (220012): wrapper: running run_atlas (--nthreads 3)
[2026-03-25 04:24:13] Arguments: --nthreads 3
[2026-03-25 04:24:13] Threads: 3
[2026-03-25 04:24:13] Checking for CVMFS
[2026-03-25 04:24:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 04:24:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 04:24:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 04:24:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 04:24:14] 2.9.2.0 4141979 3580 78236 157668 2 49 35428198 36864001 0 130560 0 1022226 99.976 124182 7242 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-25 04:24:14] CVMFS is ok
[2026-03-25 04:24:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 04:24:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 04:24:14] Further information can be found at the LHC@home message board.
[2026-03-25 04:24:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 04:24:14] Checking for apptainer binary...
[2026-03-25 04:24:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 04:24:14] Running /usr/bin/apptainer --version
[2026-03-25 04:24:14] apptainer version 1.4.1-1.1
[2026-03-25 04:24:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 04:24:14] atlasA217a
[2026-03-25 04:24:14] apptainer works
[2026-03-25 04:24:14] Set ATHENA_PROC_NUMBER=3
[2026-03-25 04:24:14] Set ATHENA_CORE_NUMBER=3
[2026-03-25 04:24:14] Starting ATLAS job with PandaID=7063388006
[2026-03-25 04:24:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 07:39:42]  *** The last 200 lines of the pilot log: ***
[2026-03-25 07:39:42] 2026-03-25 06:39:03,614 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 07:39:42] 2026-03-25 06:39:03,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 07:39:42] 2026-03-25 06:39:03,691 | INFO     | all job control threads have been joined
[2026-03-25 07:39:42] 2026-03-25 06:39:03,700 | INFO     | all data control threads have been joined
[2026-03-25 07:39:42] 2026-03-25 06:39:03,733 | INFO     | all payload control threads have been joined
[2026-03-25 07:39:42] 2026-03-25 06:39:04,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 07:39:42] 2026-03-25 06:39:04,619 | INFO     | [job] retrieve thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:04,619 | INFO     | [job] queue monitor thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:04,619 | INFO     | [job] job monitor thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:04,647 | INFO     | [data] copytool_in thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:04,697 | INFO     | [job] control thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:04,705 | INFO     | [data] control thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:04,739 | INFO     | [payload] control thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:04,863 | INFO     | [payload] validate_post thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:05,860 | INFO     | [job] validate thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:05,944 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:05,967 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:05,990 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:06,006 | INFO     | [payload] failed_post thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:06,404 | INFO     | [data] copytool_out thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:07,620 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:14,120 | INFO     | job.realtimelogging is not enabled
[2026-03-25 07:39:42] 2026-03-25 06:39:15,126 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 07:39:42] 2026-03-25 06:39:20,361 [wrapper] supervise_pilot (15 min periods counter: 14)
[2026-03-25 07:39:42] 2026-03-25 06:39:36,398 | INFO     | [monitor] cgroup control has ended
[2026-03-25 07:39:42] 2026-03-25 06:39:37,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140665854457664)>', '<ExcThread(monitor, started 140665144997632)>']
[2026-03-25 07:39:42] 2026-03-25 06:39:37,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 07:39:42] 2026-03-25 06:39:37,788 | INFO     | [monitor] control thread has ended
[2026-03-25 07:39:42] 2026-03-25 06:39:42,758 | INFO     | all workflow threads have been joined
[2026-03-25 07:39:42] 2026-03-25 06:39:42,758 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 07:39:42] 2026-03-25 06:39:42,758 | INFO     | traces error code: 0
[2026-03-25 07:39:42] 2026-03-25 06:39:42,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 07:39:42] 2026-03-25 06:39:42,809 [wrapper] ==== pilot stdout END ====
[2026-03-25 07:39:42] 2026-03-25 06:39:42,812 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 07:39:42] 2026-03-25 06:39:42,814 [wrapper] pilotpid: 224057
[2026-03-25 07:39:42] 2026-03-25 06:39:42,816 [wrapper] Pilot exit status: 0
[2026-03-25 07:39:42] 2026-03-25 06:39:42,823 [wrapper] pandaids: 7063388006
[2026-03-25 07:39:42] 2026-03-25 06:39:42,839 [wrapper] cleanup supervisor_pilot  234618 224058
[2026-03-25 07:39:42] 2026-03-25 06:39:42,841 [wrapper] Test setup, not cleaning
[2026-03-25 07:39:42] 2026-03-25 06:39:42,843 [wrapper] apfmon messages muted
[2026-03-25 07:39:42] 2026-03-25 06:39:42,845 [wrapper] ==== wrapper stdout END ====
[2026-03-25 07:39:42] 2026-03-25 06:39:42,848 [wrapper] ==== wrapper stderr END ====
[2026-03-25 07:39:42]  *** Error codes and diagnostics ***
[2026-03-25 07:39:42]     "exeErrorCode": 0,
[2026-03-25 07:39:42]     "exeErrorDiag": "",
[2026-03-25 07:39:42]     "pilotErrorCode": 0,
[2026-03-25 07:39:42]     "pilotErrorDiag": "",
[2026-03-25 07:39:42]  *** Listing of results directory ***
[2026-03-25 07:39:42] total 479540
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc      5111 Mar 23 16:45 queuedata.json
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc    585013 Mar 23 16:45 pilot3.tar.gz
[2026-03-25 07:39:42] -rwx------ 1 boinc boinc     36322 Mar 23 16:45 runpilot2-wrapper.sh
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc       100 Mar 25 04:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 07:39:42] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 04:24 run_atlas
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc       105 Mar 25 04:24 job.xml
[2026-03-25 07:39:42] -rw-r--r-- 2 boinc boinc 243400710 Mar 25 04:24 EVNT.49131861._000003.pool.root.1
[2026-03-25 07:39:42] -rw-r--r-- 2 boinc boinc    597539 Mar 25 04:24 input.tar.gz
[2026-03-25 07:39:42] -rw-r--r-- 2 boinc boinc     15845 Mar 25 04:24 start_atlas.sh
[2026-03-25 07:39:42] drwxrwx--x 2 boinc boinc      4096 Mar 25 04:24 shared
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc         0 Mar 25 04:24 boinc_setup_complete
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc      6442 Mar 25 04:24 init_data.xml
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc         0 Mar 25 04:24 boinc_lockfile
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc      2602 Mar 25 04:24 pandaJob.out
[2026-03-25 07:39:42] -rw------- 1 boinc boinc   1010836 Mar 25 04:24 agis_schedconf.cvmfs.json
[2026-03-25 07:39:42] -rw------- 1 boinc boinc       422 Mar 25 04:24 workernode_map.json
[2026-03-25 07:39:42] drwx------ 5 boinc boinc      4096 Mar 25 04:24 pilot3
[2026-03-25 07:39:42] -rw------- 1 boinc boinc        95 Mar 25 07:38 pilot_heartbeat.json
[2026-03-25 07:39:42] -rw------- 1 boinc boinc 239719485 Mar 25 07:38 HITS.49179615._000877.pool.root.1
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc       530 Mar 25 07:38 boinc_task_state.xml
[2026-03-25 07:39:42] -rw------- 1 boinc boinc      1021 Mar 25 07:38 memory_monitor_summary.json
[2026-03-25 07:39:42] -rw------- 1 boinc boinc   1511579 Mar 25 07:39 agis_ddmendpoints.agis.ALL.json
[2026-03-25 07:39:42] -rw------- 1 boinc boinc    349202 Mar 25 07:39 log.49179615._000877.job.log.tgz.1
[2026-03-25 07:39:42] -rw------- 1 boinc boinc      6316 Mar 25 07:39 heartbeat.json
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc      8192 Mar 25 07:39 boinc_mmap_file
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc        28 Mar 25 07:39 wrapper_checkpoint.txt
[2026-03-25 07:39:42] -rw------- 1 boinc boinc      4624 Mar 25 07:39 pilotlog.txt
[2026-03-25 07:39:42] -rw------- 1 boinc boinc   1650210 Mar 25 07:39 log.49179615._000877.job.log.1
[2026-03-25 07:39:42] -rw------- 1 boinc boinc       357 Mar 25 07:39 output.list
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc       620 Mar 25 07:39 runtime_log
[2026-03-25 07:39:42] -rw------- 1 boinc boinc   2017280 Mar 25 07:39 result.tar.gz
[2026-03-25 07:39:42] -rw------- 1 boinc boinc       664 Mar 25 07:39 v8vLDmkewO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5hAMDmHnWP7n.diag
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc      8917 Mar 25 07:39 runtime_log.err
[2026-03-25 07:39:42] -rw-r--r-- 1 boinc boinc      6618 Mar 25 07:39 stderr.txt
[2026-03-25 07:39:42] HITS file was successfully produced:
[2026-03-25 07:39:42] -rw------- 1 boinc boinc 239719485 Mar 25 07:38 shared/HITS.pool.root.1
[2026-03-25 07:39:42]  *** Contents of shared directory: ***
[2026-03-25 07:39:42] total 474384
[2026-03-25 07:39:42] -rw-r--r-- 2 boinc boinc 243400710 Mar 25 04:24 ATLAS.root_0
[2026-03-25 07:39:42] -rw-r--r-- 2 boinc boinc    597539 Mar 25 04:24 input.tar.gz
[2026-03-25 07:39:42] -rw-r--r-- 2 boinc boinc     15845 Mar 25 04:24 start_atlas.sh
[2026-03-25 07:39:42] -rw------- 1 boinc boinc 239719485 Mar 25 07:38 HITS.pool.root.1
[2026-03-25 07:39:42] -rw------- 1 boinc boinc   2017280 Mar 25 07:39 result.tar.gz
07:39:44 (220012): run_atlas exited; CPU time 34029.317942
07:39:44 (220012): called boinc_finish(0)

</stderr_txt>
]]>

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