Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:04:33 (21042): wrapper (7.7.26015): starting
10:04:33 (21042): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 10:04:33] Arguments: --nthreads 8
[2026-03-25 10:04:33] Threads: 8
[2026-03-25 10:04:33] Checking for CVMFS
[2026-03-25 10:04:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 10:04:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 10:04:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 10:04:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 10:04:36] 2.11.2.0 9669 143212 137072 157676 3 255 13106095 25165824 4533 130560 151 42583780 99.835 34991381 1122 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-25 10:04:36] CVMFS is ok
[2026-03-25 10:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 10:04:36] Checking for apptainer binary...
[2026-03-25 10:04:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 10:04:36] Running /usr/bin/apptainer --version
[2026-03-25 10:04:36] apptainer version 1.3.2-1.el7
[2026-03-25 10:04:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 10:04:39] cg-vwn394.simple-grid.lan
[2026-03-25 10:04:39] apptainer works
[2026-03-25 10:04:39] Set ATHENA_PROC_NUMBER=8
[2026-03-25 10:04:39] Set ATHENA_CORE_NUMBER=8
[2026-03-25 10:04:40] Starting ATLAS job with PandaID=7060578631
[2026-03-25 10:04:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 17:36:48]  *** The last 200 lines of the pilot log: ***
[2026-03-25 17:36:48] 2026-03-25 16:36:04,694 | INFO     | log transfer has been attempted: DONE
[2026-03-25 17:36:48] 2026-03-25 16:36:04,694 | INFO     | job 7060578631 has finished - writing final server update
[2026-03-25 17:36:48] 2026-03-25 16:36:04,694 | INFO     | total number of processed events: 400 (read)
[2026-03-25 17:36:48] 2026-03-25 16:36:04,696 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7060578631/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 17:36:48] 2026-03-25 16:36:04,697 | INFO     | extracted standard info from prmon json
[2026-03-25 17:36:48] 2026-03-25 16:36:04,697 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 17:36:48] 2026-03-25 16:36:04,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 17:36:48] 2026-03-25 16:36:04,698 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 17:36:48] 2026-03-25 16:36:04,698 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 17:36:48] 2026-03-25 16:36:04,707 | INFO     | fitting pss+swap vs Time
[2026-03-25 17:36:48] 2026-03-25 16:36:04,708 | INFO     | sum of square deviations: 25523715770.0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,717 | INFO     | sum of deviations: 89227217287.00006
[2026-03-25 17:36:48] 2026-03-25 16:36:04,718 | INFO     | mean x: 1774443280.0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,718 | INFO     | mean y: 2516508.9402298853
[2026-03-25 17:36:48] 2026-03-25 16:36:04,718 | INFO     | intersect: -6200680452.456473
[2026-03-25 17:36:48] 2026-03-25 16:36:04,719 | INFO     | chi2: 7.0922890185913285
[2026-03-25 17:36:48] 2026-03-25 16:36:04,719 | INFO     | sum of square deviations: 24653662247.5
[2026-03-25 17:36:48] 2026-03-25 16:36:04,725 | INFO     | sum of deviations: 117741094161.50002
[2026-03-25 17:36:48] 2026-03-25 16:36:04,726 | INFO     | mean x: 1774443127.5
[2026-03-25 17:36:48] 2026-03-25 16:36:04,726 | INFO     | mean y: 2521458.9790697675
[2026-03-25 17:36:48] 2026-03-25 16:36:04,726 | INFO     | intersect: -8471873673.95458
[2026-03-25 17:36:48] 2026-03-25 16:36:04,727 | INFO     | chi2: 6.353940982217456
[2026-03-25 17:36:48] 2026-03-25 16:36:04,727 | INFO     | current chi2=6.353940982217456 (change=10.410574561166474 %)
[2026-03-25 17:36:48] 2026-03-25 16:36:04,727 | INFO     | right removable region: 429
[2026-03-25 17:36:48] 2026-03-25 16:36:04,728 | INFO     | sum of square deviations: 24653662247.5
[2026-03-25 17:36:48] 2026-03-25 16:36:04,734 | INFO     | sum of deviations: -65731632200.99994
[2026-03-25 17:36:48] 2026-03-25 16:36:04,742 | INFO     | mean x: 1774443432.5
[2026-03-25 17:36:48] 2026-03-25 16:36:04,743 | INFO     | mean y: 2543656.2139534885
[2026-03-25 17:36:48] 2026-03-25 16:36:04,743 | INFO     | intersect: 4733567464.995037
[2026-03-25 17:36:48] 2026-03-25 16:36:04,743 | INFO     | chi2: 2.456363311354319
[2026-03-25 17:36:48] 2026-03-25 16:36:04,744 | INFO     | current chi2=2.456363311354319 (change=65.36571895314269 %)
[2026-03-25 17:36:48] 2026-03-25 16:36:04,744 | INFO     | sum of square deviations: 23803609100.0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,750 | INFO     | sum of deviations: -141218065982.0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,751 | INFO     | mean x: 1774443585.0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,751 | INFO     | mean y: 2557153.2164705885
[2026-03-25 17:36:48] 2026-03-25 16:36:04,751 | INFO     | intersect: 10529678910.894243
[2026-03-25 17:36:48] 2026-03-25 16:36:04,752 | INFO     | chi2: 1.0917764979086033
[2026-03-25 17:36:48] 2026-03-25 16:36:04,752 | INFO     | current chi2=1.0917764979086033 (change=55.553134470704535 %)
[2026-03-25 17:36:48] 2026-03-25 16:36:04,753 | INFO     | sum of square deviations: 22973323765.0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,758 | INFO     | sum of deviations: -146495715862.5
[2026-03-25 17:36:48] 2026-03-25 16:36:04,759 | INFO     | mean x: 1774443737.5
[2026-03-25 17:36:48] 2026-03-25 16:36:04,759 | INFO     | mean y: 2558115.988095238
[2026-03-25 17:36:48] 2026-03-25 16:36:04,759 | INFO     | intersect: 11317786519.238369
[2026-03-25 17:36:48] 2026-03-25 16:36:04,760 | INFO     | chi2: 1.0648774922262547
[2026-03-25 17:36:48] 2026-03-25 16:36:04,760 | INFO     | current chi2=1.0648774922262547 (change=2.4637831766736213 %)
[2026-03-25 17:36:48] 2026-03-25 16:36:04,760 | INFO     | left removable region: 30
[2026-03-25 17:36:48] 2026-03-25 16:36:04,761 | INFO     | sum of square deviations: 19696741400.0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,766 | INFO     | sum of deviations: -80099648206.9999
[2026-03-25 17:36:48] 2026-03-25 16:36:04,766 | INFO     | mean x: 1774444012.0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,766 | INFO     | mean y: 2556671.260651629
[2026-03-25 17:36:48] 2026-03-25 16:36:04,766 | INFO     | intersect: 7218589934.723078
[2026-03-25 17:36:48] 2026-03-25 16:36:04,767 | INFO     | chi2: 0.24203891455738225
[2026-03-25 17:36:48] 2026-03-25 16:36:04,767 | INFO     | current memory leak: -4.07 B/s (using 399 data points, chi2=0.24)
[2026-03-25 17:36:48] 2026-03-25 16:36:04,768 | INFO     | could have reported an average CPU frequency of 1999 MHz (18 samples)
[2026-03-25 17:36:48] 2026-03-25 16:36:04,768 | INFO     | ..............................
[2026-03-25 17:36:48] 2026-03-25 16:36:04,768 | INFO     | . Timing measurements:
[2026-03-25 17:36:48] 2026-03-25 16:36:04,769 | INFO     | . get job = 0 s
[2026-03-25 17:36:48] 2026-03-25 16:36:04,769 | INFO     | . initial setup = 104 s
[2026-03-25 17:36:48] 2026-03-25 16:36:04,769 | INFO     | . payload setup = 128 s
[2026-03-25 17:36:48] 2026-03-25 16:36:04,769 | INFO     | . stage-in = 0 s
[2026-03-25 17:36:48] 2026-03-25 16:36:04,769 | INFO     | . payload execution = 26621 s
[2026-03-25 17:36:48] 2026-03-25 16:36:04,769 | INFO     | . stage-out = 4 s
[2026-03-25 17:36:48] 2026-03-25 16:36:04,769 | INFO     | . log creation = 1 s
[2026-03-25 17:36:48] 2026-03-25 16:36:04,769 | INFO     | ..............................
[2026-03-25 17:36:48] 2026-03-25 16:36:04,883 | INFO     | 
[2026-03-25 17:36:48] 2026-03-25 16:36:04,883 | INFO     | job summary report
[2026-03-25 17:36:48] 2026-03-25 16:36:04,883 | INFO     | --------------------------------------------------
[2026-03-25 17:36:48] 2026-03-25 16:36:04,883 | INFO     | PanDA job id: 7060578631
[2026-03-25 17:36:48] 2026-03-25 16:36:04,884 | INFO     | task id: 49268065
[2026-03-25 17:36:48] 2026-03-25 16:36:04,884 | INFO     | errors: (none)
[2026-03-25 17:36:48] 2026-03-25 16:36:04,884 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 17:36:48] 2026-03-25 16:36:04,884 | INFO     | pilot state: finished 
[2026-03-25 17:36:48] 2026-03-25 16:36:04,884 | INFO     | transexitcode: 0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,884 | INFO     | exeerrorcode: 0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,884 | INFO     | exeerrordiag: 
[2026-03-25 17:36:48] 2026-03-25 16:36:04,884 | INFO     | exitcode: 0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,884 | INFO     | exitmsg: OK
[2026-03-25 17:36:48] 2026-03-25 16:36:04,885 | INFO     | cpuconsumptiontime: 105223 s
[2026-03-25 17:36:48] 2026-03-25 16:36:04,885 | INFO     | nevents: 400
[2026-03-25 17:36:48] 2026-03-25 16:36:04,885 | INFO     | neventsw: 0
[2026-03-25 17:36:48] 2026-03-25 16:36:04,885 | INFO     | pid: 29320
[2026-03-25 17:36:48] 2026-03-25 16:36:04,885 | INFO     | pgrp: 29320
[2026-03-25 17:36:48] 2026-03-25 16:36:04,885 | INFO     | corecount: 8
[2026-03-25 17:36:48] 2026-03-25 16:36:04,885 | INFO     | event service: False
[2026-03-25 17:36:48] 2026-03-25 16:36:04,885 | INFO     | sizes: {0: 2279139, 1: 2279825, 2: 2280286, 13: 2280286, 26753: 2316612, 26754: 2316611, 26758: 2325795, 26759: 2325851, 26760: 2326045}
[2026-03-25 17:36:48] 2026-03-25 16:36:04,885 | INFO     | --------------------------------------------------
[2026-03-25 17:36:48] 2026-03-25 16:36:04,886 | INFO     | 
[2026-03-25 17:36:48] 2026-03-25 16:36:04,886 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-25 17:36:48] 2026-03-25 16:36:05,325 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,325 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,325 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,325 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,327 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 17:36:48] 2026-03-25 16:36:05,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,327 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 17:36:48] 2026-03-25 16:36:05,327 | INFO     | job 7060578631 has completed (purged errors)
[2026-03-25 17:36:48] 2026-03-25 16:36:05,327 | INFO     | overall cleanup function is called
[2026-03-25 17:36:48] 2026-03-25 16:36:06,336 | INFO     | --- collectZombieJob: --- 10, [29320]
[2026-03-25 17:36:48] 2026-03-25 16:36:06,336 | INFO     | zombie collector waiting for pid 29320
[2026-03-25 17:36:48] 2026-03-25 16:36:06,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 17:36:48] 2026-03-25 16:36:06,337 | INFO     | collected zombie processes
[2026-03-25 17:36:48] 2026-03-25 16:36:06,337 | INFO     | will attempt to kill all subprocesses of pid=29320
[2026-03-25 17:36:48] 2026-03-25 16:36:06,446 | INFO     | process IDs to be killed: [29320] (in reverse order)
[2026-03-25 17:36:48] 2026-03-25 16:36:07,457 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 17:36:48] 2026-03-25 16:36:07,457 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 17:36:48] 2026-03-25 16:36:07,460 | INFO     | did not find any defunct processes belonging to 29320
[2026-03-25 17:36:48] 2026-03-25 16:36:07,463 | INFO     | did not find any defunct processes belonging to 29320
[2026-03-25 17:36:48] 2026-03-25 16:36:07,464 | INFO     | ready for new job
[2026-03-25 17:36:48] 2026-03-25 16:36:07,464 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 17:36:48] 2026-03-25 16:36:07,467 | INFO     | **************************************
[2026-03-25 17:36:48] 2026-03-25 16:36:07,467 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 17:36:48] 2026-03-25 16:36:07,467 | INFO     | **************************************
[2026-03-25 17:36:48] 2026-03-25 16:36:07,467 | INFO     | 
[2026-03-25 17:36:48] 2026-03-25 16:36:07,468 | INFO     | pilot is running in a VM
[2026-03-25 17:36:48] 2026-03-25 16:36:07,468 | INFO     | architecture information:
[2026-03-25 17:36:48] 2026-03-25 16:36:07,469 | INFO     | executing command: cat /etc/os-release
[2026-03-25 17:36:48] 2026-03-25 16:36:07,623 | INFO     | cat /etc/os-release:
[2026-03-25 17:36:48] NAME="CentOS Linux"
[2026-03-25 17:36:48] VERSION="7 (Core)"
[2026-03-25 17:36:48] ID="centos"
[2026-03-25 17:36:48] ID_LIKE="rhel fedora"
[2026-03-25 17:36:48] VERSION_ID="7"
[2026-03-25 17:36:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 17:36:48] ANSI_COLOR="0;31"
[2026-03-25 17:36:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 17:36:48] HOME_URL="https://www.centos.org/"
[2026-03-25 17:36:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 17:36:48] 
[2026-03-25 17:36:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 17:36:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 17:36:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 17:36:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 17:36:48] 
[2026-03-25 17:36:48] 2026-03-25 16:36:07,623 | INFO     | **************************************
[2026-03-25 17:36:48] 2026-03-25 16:36:08,126 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-25 17:36:48] 2026-03-25 16:36:08,236 | INFO     | sufficient remaining disk space (495525560320 B)
[2026-03-25 17:36:48] 2026-03-25 16:36:08,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 17:36:48] 2026-03-25 16:36:08,236 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 17:36:48] 2026-03-25 16:36:08,236 | INFO     | update_server=False
[2026-03-25 17:36:48] 2026-03-25 16:36:08,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 17:36:48] 2026-03-25 16:36:08,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 17:36:48] 2026-03-25 16:36:08,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 17:36:48] 2026-03-25 16:36:08,290 | INFO     | aborting loop
[2026-03-25 17:36:48] 2026-03-25 16:36:08,502 | INFO     | all job control threads have been joined
[2026-03-25 17:36:48] 2026-03-25 16:36:08,801 | INFO     | all data control threads have been joined
[2026-03-25 17:36:48] 2026-03-25 16:36:08,842 | INFO     | all payload control threads have been joined
[2026-03-25 17:36:48] 2026-03-25 16:36:09,242 | INFO     | [job] retrieve thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:09,296 | INFO     | [job] job monitor thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:09,351 | INFO     | [job] validate thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:09,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 17:36:48] 2026-03-25 16:36:09,501 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:09,508 | INFO     | [job] control thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:09,756 | INFO     | [data] copytool_in thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:09,807 | INFO     | [data] control thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:09,848 | INFO     | [payload] control thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:09,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 17:36:48] 2026-03-25 16:36:09,925 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:10,244 | INFO     | [data] copytool_out thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:10,263 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:10,317 | INFO     | [payload] validate_post thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:10,368 | INFO     | [payload] failed_post thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:10,726 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:10,908 | INFO     | [job] queue monitor thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:13,415 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 17:36:48] 2026-03-25 16:36:36,792 | INFO     | PID=24820 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 17:36:48] 2026-03-25 16:36:36,792 | INFO     | .. there are 9 such processes running
[2026-03-25 17:36:48] 2026-03-25 16:36:36,792 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 17:36:48] 2026-03-25 16:36:36,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 17:36:48] 2026-03-25 16:36:36,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 17:36:48] 2026-03-25 16:36:37,399 | INFO     | [monitor] cgroup control has ended
[2026-03-25 17:36:48] 2026-03-25 16:36:38,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208252671808)>', '<ExcThread(monitor, started 140207563192064)>']
[2026-03-25 17:36:48] 2026-03-25 16:36:38,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 17:36:48] 2026-03-25 16:36:38,804 | INFO     | [monitor] control thread has ended
[2026-03-25 17:36:48] 2026-03-25 16:36:43,484 | INFO     | all workflow threads have been joined
[2026-03-25 17:36:48] 2026-03-25 16:36:43,484 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 17:36:48] 2026-03-25 16:36:43,485 | INFO     | traces error code: 0
[2026-03-25 17:36:48] 2026-03-25 16:36:43,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 17:36:48] 2026-03-25 16:36:43,824 [wrapper] ==== pilot stdout END ====
[2026-03-25 17:36:48] 2026-03-25 16:36:43,950 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 17:36:48] 2026-03-25 16:36:44,047 [wrapper] pilotpid: 24820
[2026-03-25 17:36:48] 2026-03-25 16:36:44,167 [wrapper] Pilot exit status: 0
[2026-03-25 17:36:48] 2026-03-25 16:36:44,674 [wrapper] pandaids: 7060578631
[2026-03-25 17:36:48] 2026-03-25 16:36:45,735 [wrapper] cleanup supervisor_pilot  7575 24821
[2026-03-25 17:36:48] 2026-03-25 16:36:45,780 [wrapper] Test setup, not cleaning
[2026-03-25 17:36:48] 2026-03-25 16:36:45,823 [wrapper] apfmon messages muted
[2026-03-25 17:36:48] 2026-03-25 16:36:45,873 [wrapper] ==== wrapper stdout END ====
[2026-03-25 17:36:48] 2026-03-25 16:36:45,944 [wrapper] ==== wrapper stderr END ====
[2026-03-25 17:36:48]  *** Error codes and diagnostics ***
[2026-03-25 17:36:48]     "exeErrorCode": 0,
[2026-03-25 17:36:48]     "exeErrorDiag": "",
[2026-03-25 17:36:48]     "pilotErrorCode": 0,
[2026-03-25 17:36:48]     "pilotErrorDiag": "",
[2026-03-25 17:36:48]  *** Listing of results directory ***
[2026-03-25 17:36:48] total 491928
[2026-03-25 17:36:48] -rwx------. 1 boinc boinc     36322 Mar 22 05:32 runpilot2-wrapper.sh
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc    585013 Mar 23 22:53 pilot3.tar.gz
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc      5111 Mar 23 22:56 queuedata.json
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc       100 Mar 25 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 17:36:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar 25 10:04 run_atlas
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc       105 Mar 25 10:04 job.xml
[2026-03-25 17:36:48] -rw-r--r--. 2 boinc boinc 257868523 Mar 25 10:04 EVNT.49122475._000001.pool.root.1
[2026-03-25 17:36:48] -rw-r--r--. 2 boinc boinc     15845 Mar 25 10:04 start_atlas.sh
[2026-03-25 17:36:48] drwxrwx--x. 2 boinc boinc        68 Mar 25 10:04 shared
[2026-03-25 17:36:48] -rw-r--r--. 2 boinc boinc    597548 Mar 25 10:04 input.tar.gz
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc      6392 Mar 25 10:04 init_data.xml
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc         0 Mar 25 10:04 boinc_lockfile
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc      2599 Mar 25 10:04 pandaJob.out
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc       415 Mar 25 10:09 workernode_map.json
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc   1010820 Mar 25 10:09 agis_schedconf.cvmfs.json
[2026-03-25 17:36:48] drwx------. 5 boinc boinc      4096 Mar 25 10:09 pilot3
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc 233289027 Mar 25 17:34 HITS.49268065._000030.pool.root.1
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc       532 Mar 25 17:34 boinc_task_state.xml
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc        95 Mar 25 17:35 pilot_heartbeat.json
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc      1012 Mar 25 17:35 memory_monitor_summary.json
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc   1511579 Mar 25 17:35 agis_ddmendpoints.agis.ALL.json
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc    623830 Mar 25 17:36 log.49268065._000030.job.log.tgz.1
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc      6304 Mar 25 17:36 heartbeat.json
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc      8192 Mar 25 17:36 boinc_mmap_file
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc        29 Mar 25 17:36 wrapper_checkpoint.txt
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc      4881 Mar 25 17:36 pilotlog.txt
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc   3697008 Mar 25 17:36 log.49268065._000030.job.log.1
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc       357 Mar 25 17:36 output.list
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc       620 Mar 25 17:36 runtime_log
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc   4341760 Mar 25 17:36 result.tar.gz
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc      8832 Mar 25 17:36 runtime_log.err
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc       658 Mar 25 17:36 nEeNDmrfPO9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMS1LDm7eogKo.diag
[2026-03-25 17:36:48] -rw-r--r--. 1 boinc boinc     20739 Mar 25 17:36 stderr.txt
[2026-03-25 17:36:48] HITS file was successfully produced:
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc 233289027 Mar 25 17:34 shared/HITS.pool.root.1
[2026-03-25 17:36:48]  *** Contents of shared directory: ***
[2026-03-25 17:36:48] total 484492
[2026-03-25 17:36:48] -rw-r--r--. 2 boinc boinc 257868523 Mar 25 10:04 ATLAS.root_0
[2026-03-25 17:36:48] -rw-r--r--. 2 boinc boinc     15845 Mar 25 10:04 start_atlas.sh
[2026-03-25 17:36:48] -rw-r--r--. 2 boinc boinc    597548 Mar 25 10:04 input.tar.gz
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc 233289027 Mar 25 17:34 HITS.pool.root.1
[2026-03-25 17:36:48] -rw-------. 1 boinc boinc   4341760 Mar 25 17:36 result.tar.gz
17:36:50 (21042): run_atlas exited; CPU time 105623.113561
17:36:50 (21042): called boinc_finish(0)

</stderr_txt>
]]>

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