Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-24 09:08:47 (9308): vboxwrapper version 26210
2026-03-24 09:08:47 (9308): BOINC client version: 7.16.11
2026-03-24 09:08:48 (9308): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-03-24 09:08:48 (9308): Successfully copied 'init_data.xml' to the shared directory.
2026-03-24 09:08:49 (9308): Create VM. (boinc_c3f37c5c24f94aad, slot#1)
2026-03-24 09:08:49 (9308): Setting Memory Size for VM. (4300MB)
2026-03-24 09:08:50 (9308): Setting CPU Count for VM. (3)
2026-03-24 09:08:50 (9308): Setting Chipset Options for VM.
2026-03-24 09:08:50 (9308): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-24 09:08:50 (9308): Setting Boot Options for VM.
2026-03-24 09:08:51 (9308): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-24 09:08:51 (9308): Enabling VM Network Access.
2026-03-24 09:08:51 (9308): Disabling USB Support for VM.
2026-03-24 09:08:52 (9308): Disabling COM Port Support for VM.
2026-03-24 09:08:52 (9308): Disabling LPT Port Support for VM.
2026-03-24 09:08:52 (9308): Disabling Audio Support for VM.
2026-03-24 09:08:53 (9308): Disabling Clipboard Support for VM.
2026-03-24 09:08:53 (9308): Disabling Drag and Drop Support for VM.
2026-03-24 09:08:53 (9308): Adding storage controller(s) to VM.
2026-03-24 09:08:53 (9308): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-24 09:08:54 (9308): Adding VirtualBox Guest Additions to VM.
2026-03-24 09:08:55 (9308): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-24 09:08:55 (9308): forwarding host port 55800 to guest port 80
2026-03-24 09:08:55 (9308): Enabling remote desktop for VM.
2026-03-24 09:08:55 (9308): Required extension pack not installed, remote desktop not enabled.
2026-03-24 09:08:55 (9308): Enabling shared directory for VM.
2026-03-24 09:08:56 (9308): Starting VM using VBoxManage interface. (boinc_c3f37c5c24f94aad, slot#1)
2026-03-24 09:08:59 (9308): Successfully started VM. (PID = '1656')
2026-03-24 09:08:59 (9308): Reporting VM Process ID to BOINC.
2026-03-24 09:08:59 (9308): Guest Log: BIOS: VirtualBox 6.1.12
2026-03-24 09:08:59 (9308): Guest Log: CPUID EDX: 0x178bfbff
2026-03-24 09:08:59 (9308): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-24 09:08:59 (9308): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-24 09:08:59 (9308): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-24 09:08:59 (9308): Detected: Web Application Enabled (http://localhost:55800)
2026-03-24 09:08:59 (9308): Preference change detected
2026-03-24 09:08:59 (9308): Setting CPU throttle for VM. (100%)
2026-03-24 09:08:59 (9308): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-24 09:09:01 (9308): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-24 09:09:01 (9308): Guest Log: BIOS: Booting from Hard Disk...
2026-03-24 09:09:04 (9308): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-24 09:09:04 (9308): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-24 09:09:04 (9308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-24 09:09:10 (9308): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-24 09:09:10 (9308): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-24 09:09:16 (9308): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-24 09:09:16 (9308): Guest Log: 00:00:00.000140 main     Log opened 2026-03-24T09:09:14.848879000Z
2026-03-24 09:09:16 (9308): Guest Log: 00:00:00.000228 main     OS Product: Linux
2026-03-24 09:09:16 (9308): Guest Log: 00:00:00.000248 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-24 09:09:16 (9308): Guest Log: 00:00:00.000265 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-24 09:09:16 (9308): Guest Log: 00:00:00.000281 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-24 09:09:16 (9308): Guest Log: 00:00:00.000282 main     Process ID: 1291
2026-03-24 09:09:16 (9308): Guest Log: 00:00:00.000282 main     Package type: LINUX_64BITS_GENERIC
2026-03-24 09:09:16 (9308): Guest Log: 00:00:00.000999 main     5.2.32 r132073 started. Verbose level = 0
2026-03-24 09:09:16 (9308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-24 09:09:16 (9308): Guest Log: [INFO] Mounting shared directory
2026-03-24 09:09:16 (9308): Guest Log: [INFO] Checking for init_data.xml
2026-03-24 09:09:26 (9308): Guest Log: 00:00:10.020541 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 448 210 000ns (GuestNow=1 774 339 766 402 517 000 ns GuestLast=1 774 343 354 850 727 000 ns fSetTimeLastLoop=true )
2026-03-24 09:09:40 (9308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-24 09:09:40 (9308): Guest Log: [INFO] Detected branch: prod
2026-03-24 09:09:41 (9308): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-24 09:09:41 (9308): Guest Log: Copying input files
2026-03-24 09:09:43 (9308): Guest Log: Copied input files into RunAtlas.
2026-03-24 09:09:43 (9308): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-24 09:09:43 (9308): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-24 09:09:43 (9308): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-24 09:09:43 (9308): Guest Log: Further information can be found at the LHC@home message board.
2026-03-24 09:09:53 (9308): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-24 09:09:53 (9308): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-24 09:09:53 (9308): Guest Log: 2.6.3.0 1569 0 30184 157636 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-24 09:09:55 (9308): Guest Log: copied the webapp to /var/www
2026-03-24 09:09:55 (9308): Guest Log: ATHENA_PROC_NUMBER=3
2026-03-24 09:09:55 (9308): Guest Log: ATHENA_CORE_NUMBER=3
2026-03-24 09:09:55 (9308): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-24 09:09:55 (9308): Guest Log:  *** Starting ATLAS job. (PandaID=7056968924 taskID=49180657) ***
2026-03-24 10:49:37 (9308): Status Report: Elapsed Time: '6000.000000'
2026-03-24 10:49:37 (9308): Status Report: CPU Time: '16924.156250'
2026-03-24 12:30:31 (9308): Status Report: Elapsed Time: '12000.000000'
2026-03-24 12:30:31 (9308): Status Report: CPU Time: '35058.953125'
2026-03-24 14:11:15 (9308): Status Report: Elapsed Time: '18000.000000'
2026-03-24 14:11:15 (9308): Status Report: CPU Time: '53162.093750'
2026-03-24 14:13:12 (9308): VM state change detected. (old = 'running', new = 'paused')
2026-03-24 14:15:49 (9308): VM state change detected. (old = 'paused', new = 'running')
2026-03-24 15:55:04 (9308): Status Report: Elapsed Time: '24000.214958'
2026-03-24 15:55:04 (9308): Status Report: CPU Time: '71314.656250'
2026-03-24 16:20:48 (9308): VM state change detected. (old = 'running', new = 'paused')
2026-03-25 00:17:38 (9308): VM state change detected. (old = 'paused', new = 'running')
2026-03-25 00:17:39 (9308): Guest Log: 07:08:57.803327 timesync vgsvcTimeSyncWorker: Radical host time change: 28 614 494 000 000ns (HostNow=1 774 394 232 746 000 000 ns HostLast=1 774 365 618 252 000 000 ns)
2026-03-25 00:17:49 (9308): Guest Log: 07:09:07.804283 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 748 561 721 000ns (GuestNow=1 774 394 242 747 001 000 ns GuestLast=1 774 365 494 185 280 000 ns fSetTimeLastLoop=true )
2026-03-25 01:33:21 (9308): Status Report: Elapsed Time: '30000.775755'
2026-03-25 01:33:21 (9308): Status Report: CPU Time: '89589.312500'
2026-03-25 02:05:00 (9308): Guest Log:  *** Job finished ***
2026-03-25 02:05:00 (9308): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:18,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:18,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:27,253 | INFO     | [monitor] cgroup control has ended
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:27,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355418224448)>', '<ExcThread(monitor, started 140355118798592)>']
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:28,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:28,032 | INFO     | [monitor] control thread has ended
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,439 | INFO     | all workflow threads have been joined
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,439 | INFO     | end of generic workflow (traces error code: 0)
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,439 | INFO     | traces error code: 0
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,553 [wrapper] ==== pilot stdout END ====
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,558 [wrapper] ==== wrapper stdout RESUME ====
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,562 [wrapper] pilotpid: 5959
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,567 [wrapper] Pilot exit status: 0
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,688 [wrapper] pandaids: 7056968924
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,716 [wrapper] cleanup supervisor_pilot   989 5960
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,721 [wrapper] Test setup, not cleaning
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,726 [wrapper] apfmon messages muted
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,730 [wrapper] ==== wrapper stdout END ====
2026-03-25 02:05:00 (9308): Guest Log: 2026-03-25 01:04:32,734 [wrapper] ==== wrapper stderr END ====
2026-03-25 02:05:00 (9308): Guest Log:  *** Error codes and diagnostics ***
2026-03-25 02:05:00 (9308): Guest Log:     "exeErrorCode": 0,
2026-03-25 02:05:00 (9308): Guest Log:     "exeErrorDiag": "",
2026-03-25 02:05:00 (9308): Guest Log:     "pilotErrorCode": 0,
2026-03-25 02:05:00 (9308): Guest Log:     "pilotErrorDiag": "",
2026-03-25 02:05:00 (9308): Guest Log:  *** Listing of results directory ***
2026-03-25 02:05:00 (9308): Guest Log: total 254996
2026-03-25 02:05:00 (9308): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 22 04:31 runpilot2-wrapper.sh
2026-03-25 02:05:00 (9308): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 23 20:52 pilot3.tar.gz
2026-03-25 02:05:00 (9308): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 23 21:32 queuedata.json
2026-03-25 02:05:00 (9308): Guest Log: -rwxr-xr-x. 1 atlas atlas      8838 Mar 24 08:09 init_data.xml
2026-03-25 02:05:00 (9308): Guest Log: -rwxr-xr-x. 1 atlas atlas    597550 Mar 24 08:09 input.tar.gz
2026-03-25 02:05:00 (9308): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 24 08:09 start_atlas.sh
2026-03-25 02:05:00 (9308): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 24 08:09 EVNT.49133633._000016.pool.root.1 -> /data/./ATLAS.root_0
2026-03-25 02:05:00 (9308): Guest Log: -rw-r--r--. 1 atlas atlas      2613 Mar 24 08:09 pandaJob.out
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas   1010885 Mar 24 08:10 agis_schedconf.cvmfs.json
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas       424 Mar 24 08:10 workernode_map.json
2026-03-25 02:05:00 (9308): Guest Log: drwx------. 5 atlas atlas      4096 Mar 24 08:10 pilot3
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas 247062418 Mar 25 01:03 HITS.49180657._000390.pool.root.1
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas      1024 Mar 25 01:03 memory_monitor_summary.json
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 25 01:03 agis_ddmendpoints.agis.ALL.json
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas    629087 Mar 25 01:03 log.49180657._000390.job.log.tgz.1
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas      6354 Mar 25 01:03 heartbeat.json
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas        98 Mar 25 01:04 pilot_heartbeat.json
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 25 01:04 pilotlog.txt
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas   4464255 Mar 25 01:04 log.49180657._000390.job.log.1
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas       357 Mar 25 01:04 output.list
2026-03-25 02:05:00 (9308): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 25 01:04 runtime_log
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas   5109760 Mar 25 01:04 result.tar.gz
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas       656 Mar 25 01:04 XZOLDmSePO9n9Rq4apOajLDm4fhM0noT9bVooX4SDm880LDmp0sZQo.diag
2026-03-25 02:05:00 (9308): Guest Log: -rw-r--r--. 1 atlas atlas      8746 Mar 25 01:04 runtime_log.err
2026-03-25 02:05:00 (9308): Guest Log: Looking for outputfile HITS.49180657._000390.pool.root.1
2026-03-25 02:05:00 (9308): Guest Log: HITS file was successfully produced
2026-03-25 02:05:00 (9308): Guest Log: -rw-------. 1 atlas atlas 247062418 Mar 25 01:03 /home/atlas/RunAtlas/HITS.49180657._000390.pool.root.1
2026-03-25 02:05:01 (9308): Guest Log: Successfully finished the ATLAS job!
2026-03-25 02:05:01 (9308): Guest Log: Copying the results back to the shared directory!
2026-03-25 02:05:01 (9308): Guest Log:  *** Contents of shared directory: ***
2026-03-25 02:05:01 (9308): Guest Log: total 489888
2026-03-25 02:05:01 (9308): Guest Log: -rwxrwxrwx. 1 root root 248844282 Mar 24 08:08 ATLAS.root_0
2026-03-25 02:05:01 (9308): Guest Log: -rwxrwxrwx. 1 root root 247062418 Mar 25  2026 HITS.pool.root.1
2026-03-25 02:05:01 (9308): Guest Log: -rwxrwxrwx. 1 root root      8838 Mar 24 08:08 init_data.xml
2026-03-25 02:05:01 (9308): Guest Log: -rwxrwxrwx. 1 root root    597550 Mar 24 08:02 input.tar.gz
2026-03-25 02:05:01 (9308): Guest Log: -rwxrwxrwx. 1 root root   5109760 Mar 25  2026 result.tar.gz
2026-03-25 02:05:01 (9308): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 24 08:02 start_atlas.sh
2026-03-25 02:05:01 (9308): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-25 02:05:01 (9308): VM Completion File Detected.
2026-03-25 02:05:01 (9308): Powering off VM.
2026-03-25 02:05:02 (9308): Successfully stopped VM.
2026-03-25 02:05:02 (9308): Deregistering VM. (boinc_c3f37c5c24f94aad, slot#1)
2026-03-25 02:05:02 (9308): Removing network bandwidth throttle group from VM.
2026-03-25 02:05:02 (9308): Removing VM from VirtualBox.
2026-03-25 02:05:07 (9308): called boinc_finish(0)

</stderr_txt>
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