Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:17:20 (2975522): wrapper (7.7.26015): starting
23:17:20 (2975522): wrapper: running run_atlas (--nthreads 2)
[2026-03-24 23:17:20] Arguments: --nthreads 2
[2026-03-24 23:17:20] Threads: 2
[2026-03-24 23:17:20] Checking for CVMFS
[2026-03-24 23:17:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 23:17:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 23:17:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 23:17:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 23:17:20] 2.9.2.0 2720343 3164 57804 157660 1 49 26892187 36864001 0 130560 0 640093 99.967 104638 19551 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-24 23:17:20] CVMFS is ok
[2026-03-24 23:17:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 23:17:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 23:17:20] Further information can be found at the LHC@home message board.
[2026-03-24 23:17:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 23:17:20] Checking for apptainer binary...
[2026-03-24 23:17:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 23:17:20] Running /usr/bin/apptainer --version
[2026-03-24 23:17:20] apptainer version 1.4.1-1.1
[2026-03-24 23:17:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 23:17:20] atlasA219
[2026-03-24 23:17:20] apptainer works
[2026-03-24 23:17:20] Set ATHENA_PROC_NUMBER=2
[2026-03-24 23:17:20] Set ATHENA_CORE_NUMBER=2
[2026-03-24 23:17:20] Starting ATLAS job with PandaID=7063261331
[2026-03-24 23:17:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 05:33:10]  *** The last 200 lines of the pilot log: ***
[2026-03-25 05:33:10] 2026-03-25 04:32:25,948 | INFO     | will attempt to kill all subprocesses of pid=2983971
[2026-03-25 05:33:10] 2026-03-25 04:32:25,989 | INFO     | process IDs to be killed: [2983971] (in reverse order)
[2026-03-25 05:33:10] 2026-03-25 04:32:26,015 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 05:33:10] 2026-03-25 04:32:26,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 05:33:10] 2026-03-25 04:32:26,016 | INFO     | did not find any defunct processes belonging to 2983971
[2026-03-25 05:33:10] 2026-03-25 04:32:26,017 | INFO     | did not find any defunct processes belonging to 2983971
[2026-03-25 05:33:10] 2026-03-25 04:32:26,017 | INFO     | ready for new job
[2026-03-25 05:33:10] 2026-03-25 04:32:26,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 05:33:10] 2026-03-25 04:32:26,018 | INFO     | **************************************
[2026-03-25 05:33:10] 2026-03-25 04:32:26,018 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 05:33:10] 2026-03-25 04:32:26,018 | INFO     | **************************************
[2026-03-25 05:33:10] 2026-03-25 04:32:26,018 | INFO     | 
[2026-03-25 05:33:10] 2026-03-25 04:32:26,018 | INFO     | architecture information:
[2026-03-25 05:33:10] 2026-03-25 04:32:26,019 | INFO     | executing command: cat /etc/os-release
[2026-03-25 05:33:10] 2026-03-25 04:32:26,027 | INFO     | cat /etc/os-release:
[2026-03-25 05:33:10] NAME="CentOS Linux"
[2026-03-25 05:33:10] VERSION="7 (Core)"
[2026-03-25 05:33:10] ID="centos"
[2026-03-25 05:33:10] ID_LIKE="rhel fedora"
[2026-03-25 05:33:10] VERSION_ID="7"
[2026-03-25 05:33:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 05:33:10] ANSI_COLOR="0;31"
[2026-03-25 05:33:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 05:33:10] HOME_URL="https://www.centos.org/"
[2026-03-25 05:33:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 05:33:10] 
[2026-03-25 05:33:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 05:33:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 05:33:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 05:33:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 05:33:10] 
[2026-03-25 05:33:10] 2026-03-25 04:32:26,028 | INFO     | **************************************
[2026-03-25 05:33:10] 2026-03-25 04:32:26,528 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-25 05:33:10] 2026-03-25 04:32:26,538 | INFO     | sufficient remaining disk space (182012870656 B)
[2026-03-25 05:33:10] 2026-03-25 04:32:26,538 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 05:33:10] 2026-03-25 04:32:26,538 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 05:33:10] 2026-03-25 04:32:26,538 | INFO     | update_server=False
[2026-03-25 05:33:10] 2026-03-25 04:32:26,538 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 05:33:10] 2026-03-25 04:32:26,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 05:33:10] 2026-03-25 04:32:26,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 05:33:10] 2026-03-25 04:32:26,539 | INFO     | aborting loop
[2026-03-25 05:33:10] 2026-03-25 04:32:26,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 05:33:10] 2026-03-25 04:32:26,625 | INFO     | all job control threads have been joined
[2026-03-25 05:33:10] 2026-03-25 04:32:27,035 | INFO     | all data control threads have been joined
[2026-03-25 05:33:10] 2026-03-25 04:32:27,438 [wrapper] supervise_pilot (15 min periods counter: 26)
[2026-03-25 05:33:10] 2026-03-25 04:32:27,492 | INFO     | all payload control threads have been joined
[2026-03-25 05:33:10] 2026-03-25 04:32:27,541 | INFO     | [job] job monitor thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:27,543 | INFO     | [job] queue monitor thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:27,543 | INFO     | [job] retrieve thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:27,555 | INFO     | [payload] failed_post thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:27,630 | INFO     | [job] control thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:28,035 | INFO     | [data] control thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:28,047 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:28,069 | INFO     | [job] validate thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:28,074 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:28,497 | INFO     | [payload] control thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:28,544 | INFO     | [data] copytool_out thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:28,576 | INFO     | [payload] validate_post thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:28,627 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:28,775 | INFO     | [data] copytool_in thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:29,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 05:33:10] 2026-03-25 04:32:33,499 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:37,417 | INFO     | job.realtimelogging is not enabled
[2026-03-25 05:33:10] 2026-03-25 04:32:38,422 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 05:33:10] 2026-03-25 04:32:56,937 | INFO     | PID=2979549 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 05:33:10] 2026-03-25 04:32:56,937 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 05:33:10] 2026-03-25 04:32:56,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 05:33:10] 2026-03-25 04:32:56,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 05:33:10] 2026-03-25 04:33:04,410 | INFO     | [monitor] cgroup control has ended
[2026-03-25 05:33:10] 2026-03-25 04:33:05,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022865217344)>', '<ExcThread(monitor, started 140021688424192)>']
[2026-03-25 05:33:10] 2026-03-25 04:33:05,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 05:33:10] 2026-03-25 04:33:05,982 | INFO     | [monitor] control thread has ended
[2026-03-25 05:33:10] 2026-03-25 04:33:10,863 | INFO     | all workflow threads have been joined
[2026-03-25 05:33:10] 2026-03-25 04:33:10,863 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 05:33:10] 2026-03-25 04:33:10,863 | INFO     | traces error code: 0
[2026-03-25 05:33:10] 2026-03-25 04:33:10,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 05:33:10] 2026-03-25 04:33:10,903 [wrapper] ==== pilot stdout END ====
[2026-03-25 05:33:10] 2026-03-25 04:33:10,906 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 05:33:10] 2026-03-25 04:33:10,908 [wrapper] pilotpid: 2979549
[2026-03-25 05:33:10] 2026-03-25 04:33:10,911 [wrapper] Pilot exit status: 0
[2026-03-25 05:33:10] 2026-03-25 04:33:10,918 [wrapper] pandaids: 7063261331
[2026-03-25 05:33:10] 2026-03-25 04:33:10,933 [wrapper] cleanup supervisor_pilot 3002418 2979550
[2026-03-25 05:33:10] 2026-03-25 04:33:10,936 [wrapper] Test setup, not cleaning
[2026-03-25 05:33:10] 2026-03-25 04:33:10,938 [wrapper] apfmon messages muted
[2026-03-25 05:33:10] 2026-03-25 04:33:10,940 [wrapper] ==== wrapper stdout END ====
[2026-03-25 05:33:10] 2026-03-25 04:33:10,942 [wrapper] ==== wrapper stderr END ====
[2026-03-25 05:33:10]  *** Error codes and diagnostics ***
[2026-03-25 05:33:10]     "exeErrorCode": 0,
[2026-03-25 05:33:10]     "exeErrorDiag": "",
[2026-03-25 05:33:10]     "pilotErrorCode": 0,
[2026-03-25 05:33:10]     "pilotErrorDiag": "",
[2026-03-25 05:33:10]  *** Listing of results directory ***
[2026-03-25 05:33:10] total 492772
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc    585013 Mar 23 14:53 pilot3.tar.gz
[2026-03-25 05:33:10] -rwx------ 1 boinc boinc     36322 Mar 23 14:54 runpilot2-wrapper.sh
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc      5111 Mar 23 14:57 queuedata.json
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc       100 Mar 24 23:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 05:33:10] -rwxr-xr-x 1 boinc boinc      7986 Mar 24 23:17 run_atlas
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc       105 Mar 24 23:17 job.xml
[2026-03-25 05:33:10] -rw-r--r-- 2 boinc boinc 243424952 Mar 24 23:17 EVNT.49129985._000001.pool.root.1
[2026-03-25 05:33:10] -rw-r--r-- 2 boinc boinc    597535 Mar 24 23:17 input.tar.gz
[2026-03-25 05:33:10] -rw-r--r-- 2 boinc boinc     15845 Mar 24 23:17 start_atlas.sh
[2026-03-25 05:33:10] drwxrwx--x 2 boinc boinc      4096 Mar 24 23:17 shared
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc         0 Mar 24 23:17 boinc_setup_complete
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc      6207 Mar 24 23:17 init_data.xml
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc         0 Mar 24 23:17 boinc_lockfile
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc      2598 Mar 24 23:17 pandaJob.out
[2026-03-25 05:33:10] -rw------- 1 boinc boinc   1010852 Mar 24 23:17 agis_schedconf.cvmfs.json
[2026-03-25 05:33:10] -rw------- 1 boinc boinc       429 Mar 24 23:17 workernode_map.json
[2026-03-25 05:33:10] drwx------ 5 boinc boinc      4096 Mar 24 23:17 pilot3
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc       530 Mar 25 05:31 boinc_task_state.xml
[2026-03-25 05:33:10] -rw------- 1 boinc boinc 249984165 Mar 25 05:31 HITS.49178885._000164.pool.root.1
[2026-03-25 05:33:10] -rw------- 1 boinc boinc        95 Mar 25 05:32 pilot_heartbeat.json
[2026-03-25 05:33:10] -rw------- 1 boinc boinc      1019 Mar 25 05:32 memory_monitor_summary.json
[2026-03-25 05:33:10] -rw------- 1 boinc boinc   1511579 Mar 25 05:32 agis_ddmendpoints.agis.ALL.json
[2026-03-25 05:33:10] -rw------- 1 boinc boinc    492092 Mar 25 05:32 log.49178885._000164.job.log.tgz.1
[2026-03-25 05:33:10] -rw------- 1 boinc boinc      6303 Mar 25 05:32 heartbeat.json
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc      8192 Mar 25 05:32 boinc_mmap_file
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc        28 Mar 25 05:32 wrapper_checkpoint.txt
[2026-03-25 05:33:10] -rw------- 1 boinc boinc      4820 Mar 25 05:33 pilotlog.txt
[2026-03-25 05:33:10] -rw------- 1 boinc boinc   3137635 Mar 25 05:33 log.49178885._000164.job.log.1
[2026-03-25 05:33:10] -rw------- 1 boinc boinc       357 Mar 25 05:33 output.list
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc       620 Mar 25 05:33 runtime_log
[2026-03-25 05:33:10] -rw------- 1 boinc boinc   3645440 Mar 25 05:33 result.tar.gz
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc      8912 Mar 25 05:33 runtime_log.err
[2026-03-25 05:33:10] -rw------- 1 boinc boinc       664 Mar 25 05:33 FqYMDmAvuO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkXAMDmsNjKen.diag
[2026-03-25 05:33:10] -rw-r--r-- 1 boinc boinc     10390 Mar 25 05:33 stderr.txt
[2026-03-25 05:33:10] HITS file was successfully produced:
[2026-03-25 05:33:10] -rw------- 1 boinc boinc 249984165 Mar 25 05:31 shared/HITS.pool.root.1
[2026-03-25 05:33:10]  *** Contents of shared directory: ***
[2026-03-25 05:33:10] total 486016
[2026-03-25 05:33:10] -rw-r--r-- 2 boinc boinc 243424952 Mar 24 23:17 ATLAS.root_0
[2026-03-25 05:33:10] -rw-r--r-- 2 boinc boinc    597535 Mar 24 23:17 input.tar.gz
[2026-03-25 05:33:10] -rw-r--r-- 2 boinc boinc     15845 Mar 24 23:17 start_atlas.sh
[2026-03-25 05:33:10] -rw------- 1 boinc boinc 249984165 Mar 25 05:31 HITS.pool.root.1
[2026-03-25 05:33:10] -rw------- 1 boinc boinc   3645440 Mar 25 05:33 result.tar.gz
05:33:12 (2975522): run_atlas exited; CPU time 44249.312315
05:33:12 (2975522): called boinc_finish(0)

</stderr_txt>
]]>

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