Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:10:00 (3187113): wrapper (7.7.26015): starting
22:10:00 (3187113): wrapper: running run_atlas (--nthreads 11)
[2026-03-24 22:10:00] Arguments: --nthreads 11
[2026-03-24 22:10:00] Threads: 11
[2026-03-24 22:10:00] Checking for CVMFS
[2026-03-24 22:10:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 22:10:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 22:10:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 22:10:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 22:10:03] 2.13.3.0 7558 200792 383968 157665 2 320 21327979 32935937 28347 16776704 0 571962634 99.477 825528066 37649 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-24 22:10:03] CVMFS is ok
[2026-03-24 22:10:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 22:10:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 22:10:03] Further information can be found at the LHC@home message board.
[2026-03-24 22:10:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 22:10:03] Checking for apptainer binary...
[2026-03-24 22:10:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 22:10:03] Running /usr/bin/apptainer --version
[2026-03-24 22:10:03] apptainer version 1.4.5-2.el9
[2026-03-24 22:10:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 22:10:04] c6-6-39-2.aglt2.org
[2026-03-24 22:10:04] apptainer works
[2026-03-24 22:10:05] Set ATHENA_PROC_NUMBER=11
[2026-03-24 22:10:05] Set ATHENA_CORE_NUMBER=11
[2026-03-24 22:10:05] Starting ATLAS job with PandaID=7056945391
[2026-03-24 22:10:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 17:59:38]  *** The last 200 lines of the pilot log: ***
[2026-03-25 17:59:38] 2026-03-25 21:58:22,945 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7056945391/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 17:59:38] 2026-03-25 21:58:22,997 | INFO     | extracted standard info from prmon json
[2026-03-25 17:59:38] 2026-03-25 21:58:22,998 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 17:59:38] 2026-03-25 21:58:22,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 17:59:38] 2026-03-25 21:58:23,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 17:59:38] 2026-03-25 21:58:23,114 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 17:59:38] 2026-03-25 21:58:23,715 | INFO     | fitting pss+swap vs Time
[2026-03-25 17:59:38] 2026-03-25 21:58:23,717 | INFO     | sum of square deviations: 489025067412.1238
[2026-03-25 17:59:38] 2026-03-25 21:58:23,906 | INFO     | number of running child processes to parent process 3204040: 1
[2026-03-25 17:59:38] 2026-03-25 21:58:23,944 | INFO     | maximum number of monitored processes: 6
[2026-03-25 17:59:38] 2026-03-25 21:58:23,977 | INFO     | sum of deviations: 297367792673.39136
[2026-03-25 17:59:38] 2026-03-25 21:58:23,977 | INFO     | mean x: 1774440361.773196
[2026-03-25 17:59:38] 2026-03-25 21:58:23,977 | INFO     | mean y: 2654122.9484536084
[2026-03-25 17:59:38] 2026-03-25 21:58:23,978 | INFO     | intersect: -1076352759.875377
[2026-03-25 17:59:38] 2026-03-25 21:58:23,980 | INFO     | chi2: 4.60506625458942
[2026-03-25 17:59:38] 2026-03-25 21:58:23,982 | INFO     | sum of square deviations: 482750237446.74927
[2026-03-25 17:59:38] 2026-03-25 21:58:24,071 | INFO     | sum of deviations: 539651294269.0341
[2026-03-25 17:59:38] 2026-03-25 21:58:24,072 | INFO     | mean x: 1774440209.2743745
[2026-03-25 17:59:38] 2026-03-25 21:58:24,072 | INFO     | mean y: 2660001.220017256
[2026-03-25 17:59:38] 2026-03-25 21:58:24,072 | INFO     | intersect: -1980930852.308169
[2026-03-25 17:59:38] 2026-03-25 21:58:24,078 | INFO     | chi2: 2.3537647631694303
[2026-03-25 17:59:38] 2026-03-25 21:58:24,078 | INFO     | current chi2=2.3537647631694303 (change=48.88749405453911 %)
[2026-03-25 17:59:38] 2026-03-25 21:58:24,080 | INFO     | sum of square deviations: 476529244647.42096
[2026-03-25 17:59:38] 2026-03-25 21:58:24,822 | INFO     | sum of deviations: 534902986375.36163
[2026-03-25 17:59:38] 2026-03-25 21:58:24,822 | INFO     | mean x: 1774440056.7746966
[2026-03-25 17:59:38] 2026-03-25 21:58:24,822 | INFO     | mean y: 2659884.820623917
[2026-03-25 17:59:38] 2026-03-25 21:58:24,822 | INFO     | intersect: -1989145017.3425584
[2026-03-25 17:59:38] 2026-03-25 21:58:24,867 | INFO     | chi2: 2.3538384124959184
[2026-03-25 17:59:38] 2026-03-25 21:58:24,867 | INFO     | current chi2=2.3538384124959184 (change=-0.0031290011491612174 %)
[2026-03-25 17:59:38] 2026-03-25 21:58:24,867 | INFO     | right removable region: 1153
[2026-03-25 17:59:38] 2026-03-25 21:58:24,869 | INFO     | sum of square deviations: 482750043466.7491
[2026-03-25 17:59:38] 2026-03-25 21:58:24,910 | INFO     | sum of deviations: 20943016834.08792
[2026-03-25 17:59:38] 2026-03-25 21:58:24,910 | INFO     | mean x: 1774440514.2743745
[2026-03-25 17:59:38] 2026-03-25 21:58:24,910 | INFO     | mean y: 2660832.8110440033
[2026-03-25 17:59:38] 2026-03-25 21:58:24,910 | INFO     | intersect: -74319248.42243497
[2026-03-25 17:59:38] 2026-03-25 21:58:24,912 | INFO     | chi2: 2.4557222567983863
[2026-03-25 17:59:38] 2026-03-25 21:58:24,912 | INFO     | current chi2=2.4557222567983863 (change=46.673465243827756 %)
[2026-03-25 17:59:38] 2026-03-25 21:58:24,914 | INFO     | sum of square deviations: 476528927508.8711
[2026-03-25 17:59:38] 2026-03-25 21:58:25,045 | INFO     | sum of deviations: -55139750028.91502
[2026-03-25 17:59:38] 2026-03-25 21:58:25,046 | INFO     | mean x: 1774440666.7755632
[2026-03-25 17:59:38] 2026-03-25 21:58:25,072 | INFO     | mean y: 2662697.9462738303
[2026-03-25 17:59:38] 2026-03-25 21:58:25,072 | INFO     | intersect: 207985416.37730637
[2026-03-25 17:59:38] 2026-03-25 21:58:25,073 | INFO     | chi2: 2.3291793535570604
[2026-03-25 17:59:38] 2026-03-25 21:58:25,074 | INFO     | current chi2=2.3291793535570604 (change=5.152981078825438 %)
[2026-03-25 17:59:38] 2026-03-25 21:58:25,074 | INFO     | left removable region: 20
[2026-03-25 17:59:38] 2026-03-25 21:58:25,075 | INFO     | sum of square deviations: 450984232218.9776
[2026-03-25 17:59:38] 2026-03-25 21:58:25,126 | INFO     | sum of deviations: 143717666091.51535
[2026-03-25 17:59:38] 2026-03-25 21:58:25,126 | INFO     | mean x: 1774440636.2771404
[2026-03-25 17:59:38] 2026-03-25 21:58:25,127 | INFO     | mean y: 2669551.4060017653
[2026-03-25 17:59:38] 2026-03-25 21:58:25,127 | INFO     | intersect: -562801364.525863
[2026-03-25 17:59:38] 2026-03-25 21:58:25,128 | INFO     | chi2: 0.0077360968846631115
[2026-03-25 17:59:38] 2026-03-25 21:58:25,128 | INFO     | current memory leak: 0.32 B/s (using 1133 data points, chi2=0.01)
[2026-03-25 17:59:38] 2026-03-25 21:58:25,129 | INFO     | could have reported an average CPU frequency of 3076 MHz (43 samples)
[2026-03-25 17:59:38] 2026-03-25 21:58:25,130 | INFO     | ..............................
[2026-03-25 17:59:38] 2026-03-25 21:58:25,130 | INFO     | . Timing measurements:
[2026-03-25 17:59:38] 2026-03-25 21:58:25,130 | INFO     | . get job = 0 s
[2026-03-25 17:59:38] 2026-03-25 21:58:25,130 | INFO     | . initial setup = 54 s
[2026-03-25 17:59:38] 2026-03-25 21:58:25,130 | INFO     | . payload setup = 73 s
[2026-03-25 17:59:38] 2026-03-25 21:58:25,130 | INFO     | . stage-in = 0 s
[2026-03-25 17:59:38] 2026-03-25 21:58:25,130 | INFO     | . payload execution = 71025 s
[2026-03-25 17:59:38] 2026-03-25 21:58:25,130 | INFO     | . stage-out = 7 s
[2026-03-25 17:59:38] 2026-03-25 21:58:25,130 | INFO     | . log creation = 1 s
[2026-03-25 17:59:38] 2026-03-25 21:58:25,130 | INFO     | ..............................
[2026-03-25 17:59:38] 2026-03-25 21:58:25,700 | INFO     | 
[2026-03-25 17:59:38] 2026-03-25 21:58:25,700 | INFO     | job summary report
[2026-03-25 17:59:38] 2026-03-25 21:58:25,700 | INFO     | --------------------------------------------------
[2026-03-25 17:59:38] 2026-03-25 21:58:25,700 | INFO     | PanDA job id: 7056945391
[2026-03-25 17:59:38] 2026-03-25 21:58:25,700 | INFO     | task id: 49178919
[2026-03-25 17:59:38] 2026-03-25 21:58:25,700 | INFO     | errors: (none)
[2026-03-25 17:59:38] 2026-03-25 21:58:25,700 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 17:59:38] 2026-03-25 21:58:25,700 | INFO     | pilot state: finished 
[2026-03-25 17:59:38] 2026-03-25 21:58:25,700 | INFO     | transexitcode: 0
[2026-03-25 17:59:38] 2026-03-25 21:58:25,701 | INFO     | exeerrorcode: 0
[2026-03-25 17:59:38] 2026-03-25 21:58:25,701 | INFO     | exeerrordiag: 
[2026-03-25 17:59:38] 2026-03-25 21:58:25,711 | INFO     | exitcode: 0
[2026-03-25 17:59:38] 2026-03-25 21:58:25,711 | INFO     | exitmsg: OK
[2026-03-25 17:59:38] 2026-03-25 21:58:25,711 | INFO     | cpuconsumptiontime: 111119 s
[2026-03-25 17:59:38] 2026-03-25 21:58:25,711 | INFO     | nevents: 400
[2026-03-25 17:59:38] 2026-03-25 21:58:25,711 | INFO     | neventsw: 0
[2026-03-25 17:59:38] 2026-03-25 21:58:25,711 | INFO     | pid: 3204040
[2026-03-25 17:59:38] 2026-03-25 21:58:25,711 | INFO     | pgrp: 3204040
[2026-03-25 17:59:38] 2026-03-25 21:58:25,711 | INFO     | corecount: 11
[2026-03-25 17:59:38] 2026-03-25 21:58:25,711 | INFO     | event service: False
[2026-03-25 17:59:38] 2026-03-25 21:58:25,711 | INFO     | sizes: {0: 2279885, 1: 2279913, 2: 2280346, 13: 2280374, 71103: 2335264, 71111: 2344262, 71112: 2344446, 71117: 2344640}
[2026-03-25 17:59:38] 2026-03-25 21:58:25,712 | INFO     | --------------------------------------------------
[2026-03-25 17:59:38] 2026-03-25 21:58:25,713 | INFO     | 
[2026-03-25 17:59:38] 2026-03-25 21:58:25,713 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-25 17:59:38] 2026-03-25 21:58:26,465 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,466 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,466 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,466 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | job 7056945391 has completed (purged errors)
[2026-03-25 17:59:38] 2026-03-25 21:58:26,467 | INFO     | overall cleanup function is called
[2026-03-25 17:59:38] 2026-03-25 21:58:27,667 | INFO     | --- collectZombieJob: --- 10, [3204040]
[2026-03-25 17:59:38] 2026-03-25 21:58:27,667 | INFO     | zombie collector waiting for pid 3204040
[2026-03-25 17:59:38] 2026-03-25 21:58:27,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 17:59:38] 2026-03-25 21:58:27,668 | INFO     | collected zombie processes
[2026-03-25 17:59:38] 2026-03-25 21:58:27,668 | INFO     | will attempt to kill all subprocesses of pid=3204040
[2026-03-25 17:59:38] 2026-03-25 21:58:28,562 | INFO     | PID=3194106 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-25 17:59:38] 2026-03-25 21:58:28,562 | INFO     | .. there are 39 such processes running
[2026-03-25 17:59:38] 2026-03-25 21:58:29,367 | INFO     | process IDs to be killed: [3204040] (in reverse order)
[2026-03-25 17:59:38] 2026-03-25 21:58:30,175 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 17:59:38] 2026-03-25 21:58:30,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 17:59:38] 2026-03-25 21:58:30,208 | INFO     | did not find any defunct processes belonging to 3204040
[2026-03-25 17:59:38] 2026-03-25 21:58:30,227 | INFO     | did not find any defunct processes belonging to 3204040
[2026-03-25 17:59:38] 2026-03-25 21:58:30,230 | INFO     | ready for new job
[2026-03-25 17:59:38] 2026-03-25 21:58:30,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 17:59:38] 2026-03-25 21:58:30,255 | INFO     | **************************************
[2026-03-25 17:59:38] 2026-03-25 21:58:30,255 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 17:59:38] 2026-03-25 21:58:30,255 | INFO     | **************************************
[2026-03-25 17:59:38] 2026-03-25 21:58:30,255 | INFO     | 
[2026-03-25 17:59:38] 2026-03-25 21:58:30,266 | INFO     | architecture information:
[2026-03-25 17:59:38] 2026-03-25 21:58:30,281 | INFO     | executing command: cat /etc/os-release
[2026-03-25 17:59:38] 2026-03-25 21:58:30,472 | INFO     | cat /etc/os-release:
[2026-03-25 17:59:38] NAME="CentOS Linux"
[2026-03-25 17:59:38] VERSION="7 (Core)"
[2026-03-25 17:59:38] ID="centos"
[2026-03-25 17:59:38] ID_LIKE="rhel fedora"
[2026-03-25 17:59:38] VERSION_ID="7"
[2026-03-25 17:59:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 17:59:38] ANSI_COLOR="0;31"
[2026-03-25 17:59:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 17:59:38] HOME_URL="https://www.centos.org/"
[2026-03-25 17:59:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 17:59:38] 
[2026-03-25 17:59:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 17:59:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 17:59:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 17:59:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 17:59:38] 
[2026-03-25 17:59:38] 2026-03-25 21:58:30,472 | INFO     | **************************************
[2026-03-25 17:59:38] 2026-03-25 21:58:30,975 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-25 17:59:38] 2026-03-25 21:58:31,170 | INFO     | sufficient remaining disk space (74090283008 B)
[2026-03-25 17:59:38] 2026-03-25 21:58:31,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 17:59:38] 2026-03-25 21:58:31,171 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 17:59:38] 2026-03-25 21:58:31,171 | INFO     | update_server=False
[2026-03-25 17:59:38] 2026-03-25 21:58:31,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 17:59:38] 2026-03-25 21:58:31,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 17:59:38] 2026-03-25 21:58:31,172 | INFO     | aborting loop
[2026-03-25 17:59:38] 2026-03-25 21:58:31,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 17:59:38] 2026-03-25 21:58:31,234 | INFO     | all job control threads have been joined
[2026-03-25 17:59:38] 2026-03-25 21:58:31,302 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 17:59:38] 2026-03-25 21:58:31,726 | INFO     | all payload control threads have been joined
[2026-03-25 17:59:38] 2026-03-25 21:58:31,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 17:59:38] 2026-03-25 21:58:32,178 | INFO     | [job] retrieve thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:32,191 | INFO     | [job] job monitor thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:32,193 | INFO     | [job] queue monitor thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:32,201 | INFO     | all data control threads have been joined
[2026-03-25 17:59:38] 2026-03-25 21:58:32,241 | INFO     | [job] control thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:32,304 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:32,310 | INFO     | [job] validate thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:32,691 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:32,693 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:32,724 | INFO     | [payload] validate_post thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:32,790 | INFO     | [payload] control thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:32,812 | INFO     | [data] copytool_in thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:33,010 | INFO     | [payload] failed_post thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:33,205 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:33,212 | INFO     | [data] control thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:33,310 | INFO     | [data] copytool_out thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:58:35,934 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 17:59:38] 2026-03-25 21:59:01,668 | INFO     | PID=3194106 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 17:59:38] 2026-03-25 21:59:01,668 | INFO     | .. there are 39 such processes running
[2026-03-25 17:59:38] 2026-03-25 21:59:01,670 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 17:59:38] 2026-03-25 21:59:01,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 17:59:38] 2026-03-25 21:59:01,670 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 17:59:38] 2026-03-25 21:59:28,737 | INFO     | [monitor] cgroup control has ended
[2026-03-25 17:59:38] 2026-03-25 21:59:30,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674250008384)>', '<ExcThread(monitor, started 140673894295296)>']
[2026-03-25 17:59:38] 2026-03-25 21:59:31,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 17:59:38] 2026-03-25 21:59:31,029 | INFO     | [monitor] control thread has ended
[2026-03-25 17:59:38] 2026-03-25 21:59:35,079 | INFO     | all workflow threads have been joined
[2026-03-25 17:59:38] 2026-03-25 21:59:35,079 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 17:59:38] 2026-03-25 21:59:35,079 | INFO     | traces error code: 0
[2026-03-25 17:59:38] 2026-03-25 21:59:35,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 17:59:38] 2026-03-25 21:59:35,758 [wrapper] ==== pilot stdout END ====
[2026-03-25 17:59:38] 2026-03-25 21:59:35,925 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 17:59:38] 2026-03-25 21:59:35,971 [wrapper] pilotpid: 3194106
[2026-03-25 17:59:38] 2026-03-25 21:59:36,028 [wrapper] Pilot exit status: 0
[2026-03-25 17:59:38] 2026-03-25 21:59:36,339 [wrapper] pandaids: 7056945391
[2026-03-25 17:59:38] 2026-03-25 21:59:36,984 [wrapper] cleanup supervisor_pilot 3586360 3194107
[2026-03-25 17:59:38] 2026-03-25 21:59:37,046 [wrapper] Test setup, not cleaning
[2026-03-25 17:59:38] 2026-03-25 21:59:37,080 [wrapper] apfmon messages muted
[2026-03-25 17:59:38] 2026-03-25 21:59:37,122 [wrapper] ==== wrapper stdout END ====
[2026-03-25 17:59:38] 2026-03-25 21:59:37,161 [wrapper] ==== wrapper stderr END ====
[2026-03-25 17:59:38]  *** Error codes and diagnostics ***
[2026-03-25 17:59:38]     "exeErrorCode": 0,
[2026-03-25 17:59:38]     "exeErrorDiag": "",
[2026-03-25 17:59:38]     "pilotErrorCode": 0,
[2026-03-25 17:59:38]     "pilotErrorDiag": "",
[2026-03-25 17:59:38]  *** Listing of results directory ***
[2026-03-25 17:59:38] total 480596
[2026-03-25 17:59:38] -rwx------. 1 boincer umatlas     36322 Mar 22 00:30 runpilot2-wrapper.sh
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas    585013 Mar 23 16:52 pilot3.tar.gz
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas      5111 Mar 23 17:15 queuedata.json
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas       100 Mar 24 22:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 17:59:38] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 24 22:09 run_atlas
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas       105 Mar 24 22:09 job.xml
[2026-03-25 17:59:38] -rw-r--r--. 2 boincer umatlas 237765880 Mar 24 22:10 EVNT.49130085._000005.pool.root.1
[2026-03-25 17:59:38] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 22:10 start_atlas.sh
[2026-03-25 17:59:38] drwxrwx--x. 2 boincer umatlas      4096 Mar 24 22:10 shared
[2026-03-25 17:59:38] -rw-r--r--. 2 boincer umatlas    597554 Mar 24 22:10 input.tar.gz
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas         0 Mar 24 22:10 boinc_lockfile
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas      2625 Mar 24 22:10 pandaJob.out
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas        57 Mar 24 22:10 setup.sh.local
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas   1010844 Mar 24 22:12 agis_schedconf.cvmfs.json
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas       442 Mar 24 22:12 workernode_map.json
[2026-03-25 17:59:38] drwx------. 5 boincer umatlas      4096 Mar 24 22:12 pilot3
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas 233046132 Mar 25 17:54 HITS.49178919._000119.pool.root.1
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas       532 Mar 25 17:54 boinc_task_state.xml
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas      6842 Mar 25 17:55 init_data.xml
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas      1045 Mar 25 17:58 memory_monitor_summary.json
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas   1511579 Mar 25 17:58 agis_ddmendpoints.agis.ALL.json
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas   1124053 Mar 25 17:58 log.49178919._000119.job.log.tgz.1
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas      6397 Mar 25 17:58 heartbeat.json
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas        95 Mar 25 17:59 pilot_heartbeat.json
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas      4820 Mar 25 17:59 pilotlog.txt
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas      8192 Mar 25 17:59 boinc_mmap_file
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas        29 Mar 25 17:59 wrapper_checkpoint.txt
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas   7565098 Mar 25 17:59 log.49178919._000119.job.log.1
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas       357 Mar 25 17:59 output.list
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas       620 Mar 25 17:59 runtime_log
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas   8704000 Mar 25 17:59 result.tar.gz
[2026-03-25 17:59:38] -rw-------. 1 boincer umatlas       661 Mar 25 17:59 SVLLDm5cPO9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOp0LDm683Qkm.diag
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas      9349 Mar 25 17:59 runtime_log.err
[2026-03-25 17:59:38] -rw-r--r--. 1 boincer umatlas     21268 Mar 25 17:59 stderr.txt
[2026-03-25 17:59:39] HITS file was successfully produced:
[2026-03-25 17:59:39] -rw-------. 1 boincer umatlas 233046132 Mar 25 17:54 shared/HITS.pool.root.1
[2026-03-25 17:59:39]  *** Contents of shared directory: ***
[2026-03-25 17:59:39] total 468888
[2026-03-25 17:59:39] -rw-r--r--. 2 boincer umatlas 237765880 Mar 24 22:10 ATLAS.root_0
[2026-03-25 17:59:39] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 22:10 start_atlas.sh
[2026-03-25 17:59:39] -rw-r--r--. 2 boincer umatlas    597554 Mar 24 22:10 input.tar.gz
[2026-03-25 17:59:39] -rw-------. 1 boincer umatlas 233046132 Mar 25 17:54 HITS.pool.root.1
[2026-03-25 17:59:39] -rw-------. 1 boincer umatlas   8704000 Mar 25 17:59 result.tar.gz
17:59:40 (3187113): run_atlas exited; CPU time 114014.004431
17:59:40 (3187113): called boinc_finish(0)

</stderr_txt>
]]>

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