Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:46 (3036775): wrapper (7.7.26015): starting
00:02:46 (3036775): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 00:02:46] Arguments: --nthreads 8
[2026-03-24 00:02:46] Threads: 8
[2026-03-24 00:02:46] Checking for CVMFS
[2026-03-24 00:02:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 00:02:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 00:02:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 00:02:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 00:02:49] 2.13.3.0 9277 199420 356924 157629 3 349 16804908 32935936 15721 16776704 0 848640174 99.706 645687899 32322 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-24 00:02:49] CVMFS is ok
[2026-03-24 00:02:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 00:02:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 00:02:49] Further information can be found at the LHC@home message board.
[2026-03-24 00:02:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 00:02:49] Checking for apptainer binary...
[2026-03-24 00:02:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 00:02:49] Running /usr/bin/apptainer --version
[2026-03-24 00:02:49] apptainer version 1.4.5-2.el9
[2026-03-24 00:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 00:02:50] c-5-2.aglt2.org
[2026-03-24 00:02:50] apptainer works
[2026-03-24 00:02:50] Set ATHENA_PROC_NUMBER=8
[2026-03-24 00:02:50] Set ATHENA_CORE_NUMBER=8
[2026-03-24 00:02:50] Starting ATLAS job with PandaID=7063507327
[2026-03-24 00:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 00:03:21]  *** The last 200 lines of the pilot log: ***
[2026-03-26 00:03:21] 2026-03-26 04:02:19,333 | INFO     | fitting pss+swap vs Time
[2026-03-26 00:03:21] 2026-03-26 04:02:19,355 | INFO     | sum of square deviations: 7020585254842.937
[2026-03-26 00:03:21] 2026-03-26 04:02:20,416 | INFO     | monitor loop #8222: job 0:7063507327 is in state 'finished'
[2026-03-26 00:03:21] 2026-03-26 04:02:20,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-26 00:03:21] 2026-03-26 04:02:20,900 | INFO     | sum of deviations: 5144990694395.49
[2026-03-26 00:03:21] 2026-03-26 04:02:20,901 | INFO     | mean x: 1774411457.156239
[2026-03-26 00:03:21] 2026-03-26 04:02:20,901 | INFO     | mean y: 2530404.7115588547
[2026-03-26 00:03:21] 2026-03-26 04:02:20,901 | INFO     | intersect: -1297835605.2019312
[2026-03-26 00:03:21] 2026-03-26 04:02:20,904 | INFO     | chi2: 7.637896895567206
[2026-03-26 00:03:21] 2026-03-26 04:02:20,908 | INFO     | sum of square deviations: 6983426760187.551
[2026-03-26 00:03:21] 2026-03-26 04:02:22,609 | INFO     | sum of deviations: 5494617684757.052
[2026-03-26 00:03:21] 2026-03-26 04:02:22,610 | INFO     | mean x: 1774411304.657932
[2026-03-26 00:03:21] 2026-03-26 04:02:22,627 | INFO     | mean y: 2531837.9886685554
[2026-03-26 00:03:21] 2026-03-26 04:02:22,627 | INFO     | intersect: -1393589589.1292217
[2026-03-26 00:03:21] 2026-03-26 04:02:22,646 | INFO     | chi2: 6.265709218107746
[2026-03-26 00:03:21] 2026-03-26 04:02:22,646 | INFO     | current chi2=6.265709218107746 (change=17.96551716030409 %)
[2026-03-26 00:03:21] 2026-03-26 04:02:22,647 | INFO     | right removable region: 2823
[2026-03-26 00:03:21] 2026-03-26 04:02:22,658 | INFO     | sum of square deviations: 6983425109527.561
[2026-03-26 00:03:21] 2026-03-26 04:02:23,015 | INFO     | monitor loop #8223: job 0:7063507327 is in state 'finished'
[2026-03-26 00:03:21] 2026-03-26 04:02:23,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-26 00:03:21] 2026-03-26 04:02:23,533 | INFO     | PID=3050695 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-26 00:03:21] 2026-03-26 04:02:23,537 | INFO     | .. there are 34 such processes running
[2026-03-26 00:03:21] 2026-03-26 04:02:23,850 | INFO     | sum of deviations: 4206641728586.052
[2026-03-26 00:03:21] 2026-03-26 04:02:23,850 | INFO     | mean x: 1774411609.657932
[2026-03-26 00:03:21] 2026-03-26 04:02:23,850 | INFO     | mean y: 2534255.1512039662
[2026-03-26 00:03:21] 2026-03-26 04:02:23,850 | INFO     | intersect: -1066327199.4795558
[2026-03-26 00:03:21] 2026-03-26 04:02:23,858 | INFO     | chi2: 3.8756668816855075
[2026-03-26 00:03:21] 2026-03-26 04:02:23,859 | INFO     | current chi2=3.8756668816855075 (change=49.257407704274954 %)
[2026-03-26 00:03:21] 2026-03-26 04:02:23,888 | INFO     | sum of square deviations: 6946396315756.172
[2026-03-26 00:03:21] 2026-03-26 04:02:24,552 | INFO     | time since job start (172655s) is within the limit (345600.0s)
[2026-03-26 00:03:21] 2026-03-26 04:02:24,709 | INFO     | sum of deviations: 3608922724594.13
[2026-03-26 00:03:21] 2026-03-26 04:02:24,709 | INFO     | mean x: 1774411762.159631
[2026-03-26 00:03:21] 2026-03-26 04:02:24,709 | INFO     | mean y: 2536716.39304718
[2026-03-26 00:03:21] 2026-03-26 04:02:24,709 | INFO     | intersect: -919339122.5537996
[2026-03-26 00:03:21] 2026-03-26 04:02:24,719 | INFO     | chi2: 2.3647794701048057
[2026-03-26 00:03:21] 2026-03-26 04:02:24,720 | INFO     | current chi2=2.3647794701048057 (change=38.983933802990435 %)
[2026-03-26 00:03:21] 2026-03-26 04:02:24,727 | INFO     | sum of square deviations: 6909499328317.542
[2026-03-26 00:03:21] 2026-03-26 04:02:25,708 | INFO     | monitor loop #8224: job 0:7063507327 is in state 'finished'
[2026-03-26 00:03:21] 2026-03-26 04:02:25,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-26 00:03:21] 2026-03-26 04:02:26,161 | INFO     | sum of deviations: 3269248704334.937
[2026-03-26 00:03:21] 2026-03-26 04:02:26,212 | INFO     | mean x: 1774411914.6599147
[2026-03-26 00:03:21] 2026-03-26 04:02:26,212 | INFO     | mean y: 2538120.4001421463
[2026-03-26 00:03:21] 2026-03-26 04:02:26,213 | INFO     | intersect: -837029781.3122007
[2026-03-26 00:03:21] 2026-03-26 04:02:26,268 | INFO     | chi2: 1.912735408743865
[2026-03-26 00:03:21] 2026-03-26 04:02:26,292 | INFO     | current chi2=1.912735408743865 (change=19.11569628693141 %)
[2026-03-26 00:03:21] 2026-03-26 04:02:26,292 | INFO     | left removable region: 30
[2026-03-26 00:03:21] 2026-03-26 04:02:26,296 | INFO     | sum of square deviations: 6755961276057.4375
[2026-03-26 00:03:21] 2026-03-26 04:02:26,646 | INFO     | time since job start (172657s) is within the limit (345600.0s)
[2026-03-26 00:03:21] 2026-03-26 04:02:27,440 | INFO     | sum of deviations: 3049669254558.2075
[2026-03-26 00:03:21] 2026-03-26 04:02:27,441 | INFO     | mean x: 1774412189.158969
[2026-03-26 00:03:21] 2026-03-26 04:02:27,441 | INFO     | mean y: 2541941.947726459
[2026-03-26 00:03:21] 2026-03-26 04:02:27,441 | INFO     | intersect: -798435162.1349854
[2026-03-26 00:03:21] 2026-03-26 04:02:27,472 | INFO     | chi2: 0.09149436109736639
[2026-03-26 00:03:21] 2026-03-26 04:02:27,472 | INFO     | current memory leak: 0.45 B/s (using 2793 data points, chi2=0.09)
[2026-03-26 00:03:21] 2026-03-26 04:02:27,475 | INFO     | could have reported an average CPU frequency of 2599 MHz (99 samples)
[2026-03-26 00:03:21] 2026-03-26 04:02:27,502 | INFO     | ..............................
[2026-03-26 00:03:21] 2026-03-26 04:02:27,502 | INFO     | . Timing measurements:
[2026-03-26 00:03:21] 2026-03-26 04:02:27,502 | INFO     | . get job = 0 s
[2026-03-26 00:03:21] 2026-03-26 04:02:27,503 | INFO     | . initial setup = 40 s
[2026-03-26 00:03:21] 2026-03-26 04:02:27,503 | INFO     | . payload setup = 75 s
[2026-03-26 00:03:21] 2026-03-26 04:02:27,503 | INFO     | . stage-in = 0 s
[2026-03-26 00:03:21] 2026-03-26 04:02:27,503 | INFO     | . payload execution = 172547 s
[2026-03-26 00:03:21] 2026-03-26 04:02:27,503 | INFO     | . stage-out = 11 s
[2026-03-26 00:03:21] 2026-03-26 04:02:27,503 | INFO     | . log creation = 3 s
[2026-03-26 00:03:21] 2026-03-26 04:02:27,503 | INFO     | ..............................
[2026-03-26 00:03:21] 2026-03-26 04:02:28,208 | INFO     | 
[2026-03-26 00:03:21] 2026-03-26 04:02:28,208 | INFO     | job summary report
[2026-03-26 00:03:21] 2026-03-26 04:02:28,208 | INFO     | --------------------------------------------------
[2026-03-26 00:03:21] 2026-03-26 04:02:28,208 | INFO     | PanDA job id: 7063507327
[2026-03-26 00:03:21] 2026-03-26 04:02:28,208 | INFO     | task id: 49182372
[2026-03-26 00:03:21] 2026-03-26 04:02:28,208 | INFO     | errors: (none)
[2026-03-26 00:03:21] 2026-03-26 04:02:28,209 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 00:03:21] 2026-03-26 04:02:28,209 | INFO     | pilot state: finished 
[2026-03-26 00:03:21] 2026-03-26 04:02:28,209 | INFO     | transexitcode: 0
[2026-03-26 00:03:21] 2026-03-26 04:02:28,209 | INFO     | exeerrorcode: 0
[2026-03-26 00:03:21] 2026-03-26 04:02:28,209 | INFO     | exeerrordiag: 
[2026-03-26 00:03:21] 2026-03-26 04:02:28,209 | INFO     | exitcode: 0
[2026-03-26 00:03:21] 2026-03-26 04:02:28,209 | INFO     | exitmsg: OK
[2026-03-26 00:03:21] 2026-03-26 04:02:28,209 | INFO     | cpuconsumptiontime: 121910 s
[2026-03-26 00:03:21] 2026-03-26 04:02:28,209 | INFO     | nevents: 400
[2026-03-26 00:03:21] 2026-03-26 04:02:28,209 | INFO     | neventsw: 0
[2026-03-26 00:03:21] 2026-03-26 04:02:28,210 | INFO     | pid: 3082664
[2026-03-26 00:03:21] 2026-03-26 04:02:28,210 | INFO     | pgrp: 3082664
[2026-03-26 00:03:21] 2026-03-26 04:02:28,210 | INFO     | corecount: 8
[2026-03-26 00:03:21] 2026-03-26 04:02:28,210 | INFO     | event service: False
[2026-03-26 00:03:21] 2026-03-26 04:02:28,210 | INFO     | sizes: {0: 2279822, 2: 2280283, 172628: 2379069, 172629: 2379068, 172643: 2388122, 172647: 2388178, 172656: 2388500}
[2026-03-26 00:03:21] 2026-03-26 04:02:28,210 | INFO     | --------------------------------------------------
[2026-03-26 00:03:21] 2026-03-26 04:02:28,210 | INFO     | 
[2026-03-26 00:03:21] 2026-03-26 04:02:28,210 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-26 00:03:21] 2026-03-26 04:02:28,444 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,444 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,445 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,445 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,446 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 00:03:21] 2026-03-26 04:02:28,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 00:03:21] 2026-03-26 04:02:28,447 | INFO     | job 7063507327 has completed (purged errors)
[2026-03-26 00:03:21] 2026-03-26 04:02:28,447 | INFO     | overall cleanup function is called
[2026-03-26 00:03:21] 2026-03-26 04:02:29,525 | INFO     | --- collectZombieJob: --- 10, [3082664]
[2026-03-26 00:03:21] 2026-03-26 04:02:29,525 | INFO     | zombie collector waiting for pid 3082664
[2026-03-26 00:03:21] 2026-03-26 04:02:29,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 00:03:21] 2026-03-26 04:02:29,525 | INFO     | collected zombie processes
[2026-03-26 00:03:21] 2026-03-26 04:02:29,526 | INFO     | will attempt to kill all subprocesses of pid=3082664
[2026-03-26 00:03:21] 2026-03-26 04:02:30,251 | INFO     | process IDs to be killed: [3082664] (in reverse order)
[2026-03-26 00:03:21] 2026-03-26 04:02:30,445 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 00:03:21] 2026-03-26 04:02:30,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 00:03:21] 2026-03-26 04:02:30,470 | INFO     | did not find any defunct processes belonging to 3082664
[2026-03-26 00:03:21] 2026-03-26 04:02:30,486 | INFO     | did not find any defunct processes belonging to 3082664
[2026-03-26 00:03:21] 2026-03-26 04:02:30,486 | INFO     | ready for new job
[2026-03-26 00:03:21] 2026-03-26 04:02:30,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 00:03:21] 2026-03-26 04:02:30,495 | INFO     | **************************************
[2026-03-26 00:03:21] 2026-03-26 04:02:30,495 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 00:03:21] 2026-03-26 04:02:30,495 | INFO     | **************************************
[2026-03-26 00:03:21] 2026-03-26 04:02:30,495 | INFO     | 
[2026-03-26 00:03:21] 2026-03-26 04:02:30,497 | INFO     | architecture information:
[2026-03-26 00:03:21] 2026-03-26 04:02:30,498 | INFO     | executing command: cat /etc/os-release
[2026-03-26 00:03:21] 2026-03-26 04:02:30,629 | INFO     | cat /etc/os-release:
[2026-03-26 00:03:21] NAME="CentOS Linux"
[2026-03-26 00:03:21] VERSION="7 (Core)"
[2026-03-26 00:03:21] ID="centos"
[2026-03-26 00:03:21] ID_LIKE="rhel fedora"
[2026-03-26 00:03:21] VERSION_ID="7"
[2026-03-26 00:03:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 00:03:21] ANSI_COLOR="0;31"
[2026-03-26 00:03:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 00:03:21] HOME_URL="https://www.centos.org/"
[2026-03-26 00:03:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 00:03:21] 
[2026-03-26 00:03:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 00:03:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 00:03:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 00:03:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 00:03:21] 
[2026-03-26 00:03:21] 2026-03-26 04:02:30,629 | INFO     | **************************************
[2026-03-26 00:03:21] 2026-03-26 04:02:31,133 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-26 00:03:21] 2026-03-26 04:02:31,389 | INFO     | sufficient remaining disk space (75693555712 B)
[2026-03-26 00:03:21] 2026-03-26 04:02:31,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 00:03:21] 2026-03-26 04:02:31,390 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 00:03:21] 2026-03-26 04:02:31,390 | INFO     | update_server=False
[2026-03-26 00:03:21] 2026-03-26 04:02:31,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 00:03:21] 2026-03-26 04:02:31,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 00:03:21] 2026-03-26 04:02:31,701 | INFO     | all job control threads have been joined
[2026-03-26 00:03:21] 2026-03-26 04:02:31,812 | INFO     | all data control threads have been joined
[2026-03-26 00:03:21] 2026-03-26 04:02:31,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 00:03:21] 2026-03-26 04:02:31,843 | INFO     | aborting loop
[2026-03-26 00:03:21] 2026-03-26 04:02:32,320 | INFO     | all payload control threads have been joined
[2026-03-26 00:03:21] 2026-03-26 04:02:32,396 | INFO     | [job] retrieve thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:32,700 | INFO     | [payload] failed_post thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:32,718 | INFO     | [job] control thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:32,768 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:32,818 | INFO     | [data] control thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:32,849 | INFO     | [job] job monitor thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:33,078 | INFO     | [payload] validate_post thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:33,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 00:03:21] 2026-03-26 04:02:33,267 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:33,332 | INFO     | [payload] control thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:33,412 | INFO     | [data] copytool_out thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:33,574 | INFO     | [job] validate thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:33,574 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:33,581 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:33,855 | INFO     | [data] copytool_in thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:34,211 | INFO     | [job] queue monitor thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:34,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 00:03:21] 2026-03-26 04:02:38,364 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 00:03:21] 2026-03-26 04:02:48,982 | INFO     | [monitor] cgroup control has ended
[2026-03-26 00:03:21] 2026-03-26 04:02:49,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629764642624)>', '<ExcThread(monitor, started 139629034460928)>']
[2026-03-26 00:03:21] 2026-03-26 04:02:54,439 | INFO     | all workflow threads have been joined
[2026-03-26 00:03:21] 2026-03-26 04:02:54,439 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 00:03:21] 2026-03-26 04:02:54,439 | INFO     | traces error code: 0
[2026-03-26 00:03:21] 2026-03-26 04:02:54,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 00:03:21] 2026-03-26 04:03:00,938 | INFO     | PID=3050695 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-26 00:03:21] 2026-03-26 04:03:00,939 | INFO     | .. there are 34 such processes running
[2026-03-26 00:03:21] 2026-03-26 04:03:00,939 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 00:03:21] 2026-03-26 04:03:00,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 00:03:21] 2026-03-26 04:03:00,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 00:03:21] 2026-03-26 04:03:00,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 00:03:21] 2026-03-26 04:03:00,940 | INFO     | [monitor] control thread has ended
[2026-03-26 00:03:21] 2026-03-26 04:03:01,144 [wrapper] ==== pilot stdout END ====
[2026-03-26 00:03:21] 2026-03-26 04:03:01,157 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 00:03:21] 2026-03-26 04:03:01,172 [wrapper] pilotpid: 3050695
[2026-03-26 00:03:21] 2026-03-26 04:03:01,187 [wrapper] Pilot exit status: 0
[2026-03-26 00:03:21] 2026-03-26 04:03:01,389 [wrapper] pandaids: 7063507327
[2026-03-26 00:03:21] 2026-03-26 04:03:02,393 [wrapper] cleanup supervisor_pilot 3671050 3050697
[2026-03-26 00:03:21] 2026-03-26 04:03:02,459 [wrapper] Test setup, not cleaning
[2026-03-26 00:03:21] 2026-03-26 04:03:02,491 [wrapper] apfmon messages muted
[2026-03-26 00:03:21] 2026-03-26 04:03:02,544 [wrapper] ==== wrapper stdout END ====
[2026-03-26 00:03:21] 2026-03-26 04:03:02,594 [wrapper] ==== wrapper stderr END ====
[2026-03-26 00:03:21]  *** Error codes and diagnostics ***
[2026-03-26 00:03:21]     "exeErrorCode": 0,
[2026-03-26 00:03:21]     "exeErrorDiag": "",
[2026-03-26 00:03:21]     "pilotErrorCode": 0,
[2026-03-26 00:03:21]     "pilotErrorDiag": "",
[2026-03-26 00:03:21]  *** Listing of results directory ***
[2026-03-26 00:03:21] total 500044
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas    585013 Mar 23 16:52 pilot3.tar.gz
[2026-03-26 00:03:21] -rwx------. 1 boincer umatlas     36322 Mar 23 16:56 runpilot2-wrapper.sh
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas      5111 Mar 23 17:01 queuedata.json
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas       100 Mar 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 00:03:21] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 24 00:02 run_atlas
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas       105 Mar 24 00:02 job.xml
[2026-03-26 00:03:21] -rw-r--r--. 2 boincer umatlas 233328033 Mar 24 00:02 EVNT.49136845._000006.pool.root.1
[2026-03-26 00:03:21] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 00:02 start_atlas.sh
[2026-03-26 00:03:21] drwxrwx--x. 2 boincer umatlas      4096 Mar 24 00:02 shared
[2026-03-26 00:03:21] -rw-r--r--. 2 boincer umatlas    597555 Mar 24 00:02 input.tar.gz
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas         0 Mar 24 00:02 boinc_lockfile
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas      2614 Mar 24 00:02 pandaJob.out
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas        57 Mar 24 00:02 setup.sh.local
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas   1010901 Mar 24 00:04 agis_schedconf.cvmfs.json
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas       439 Mar 24 00:04 workernode_map.json
[2026-03-26 00:03:21] drwx------. 5 boincer umatlas      4096 Mar 24 00:04 pilot3
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas      6660 Mar 25 23:57 init_data.xml
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas 232836399 Mar 25 23:59 HITS.49182372._000598.pool.root.1
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas       532 Mar 26 00:00 boinc_task_state.xml
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas      1048 Mar 26 00:01 memory_monitor_summary.json
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas   1511579 Mar 26 00:02 agis_ddmendpoints.agis.ALL.json
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas   2284990 Mar 26 00:02 log.49182372._000598.job.log.tgz.1
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas        95 Mar 26 00:02 pilot_heartbeat.json
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas      6391 Mar 26 00:02 heartbeat.json
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas       823 Mar 26 00:03 pilotlog.txt
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas      8192 Mar 26 00:03 boinc_mmap_file
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas        29 Mar 26 00:03 wrapper_checkpoint.txt
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas  18684493 Mar 26 00:03 log.49182372._000598.job.log.1
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas       357 Mar 26 00:03 output.list
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas       620 Mar 26 00:03 runtime_log
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas  20992000 Mar 26 00:03 result.tar.gz
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas      9328 Mar 26 00:03 runtime_log.err
[2026-03-26 00:03:21] -rw-------. 1 boincer umatlas       658 Mar 26 00:03 9FXMDmIV1O9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3YBMDmSUY6Lo.diag
[2026-03-26 00:03:21] -rw-r--r--. 1 boincer umatlas     21305 Mar 26 00:03 stderr.txt
[2026-03-26 00:03:22] HITS file was successfully produced:
[2026-03-26 00:03:22] -rw-------. 1 boincer umatlas 232836399 Mar 25 23:59 shared/HITS.pool.root.1
[2026-03-26 00:03:22]  *** Contents of shared directory: ***
[2026-03-26 00:03:22] total 476348
[2026-03-26 00:03:22] -rw-r--r--. 2 boincer umatlas 233328033 Mar 24 00:02 ATLAS.root_0
[2026-03-26 00:03:22] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 00:02 start_atlas.sh
[2026-03-26 00:03:22] -rw-r--r--. 2 boincer umatlas    597555 Mar 24 00:02 input.tar.gz
[2026-03-26 00:03:22] -rw-------. 1 boincer umatlas 232836399 Mar 25 23:59 HITS.pool.root.1
[2026-03-26 00:03:22] -rw-------. 1 boincer umatlas  20992000 Mar 26 00:03 result.tar.gz
00:03:23 (3036775): run_atlas exited; CPU time 129999.557767
00:03:23 (3036775): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN