Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
13:16:52 (97692): wrapper (7.7.26015): starting
13:16:52 (97692): wrapper: running run_atlas (--nthreads 4)
[2026-03-23 13:16:52] Arguments: --nthreads 4
[2026-03-23 13:16:52] Threads: 4
[2026-03-23 13:16:52] Checking for CVMFS
[2026-03-23 13:16:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 13:16:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 13:16:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 13:16:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 13:16:54] 2.13.3.0 8899 327 52848 157612 0 252 2624786 4096000 2610 130560 0 300360 99.995 1821 171 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-23 13:16:54] CVMFS is ok
[2026-03-23 13:16:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 13:16:54] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-23 13:16:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-23 13:16:54] Further information can be found at the LHC@home message board.
[2026-03-23 13:16:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 13:16:54] Checking for apptainer binary...
[2026-03-23 13:16:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 13:16:54] Running /usr/bin/apptainer --version
[2026-03-23 13:16:54] apptainer version 1.4.5
[2026-03-23 13:16:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 13:16:54] T3500-Ubuntu
[2026-03-23 13:16:54] apptainer works
[2026-03-23 13:16:54] Set ATHENA_PROC_NUMBER=4
[2026-03-23 13:16:54] Set ATHENA_CORE_NUMBER=4
[2026-03-23 13:16:54] Starting ATLAS job with PandaID=7063067854
[2026-03-23 13:16:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 19:49:57]  *** The last 200 lines of the pilot log: ***
[2026-03-23 19:49:57] 2026-03-23 23:49:11,520 | INFO     | preparing for final server update for job 7063067854 in state='finished'
[2026-03-23 19:49:57] 2026-03-23 23:49:11,899 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-23 19:49:57] 2026-03-23 23:49:11,900 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-7063067854/jobReport.json
[2026-03-23 19:49:57] 2026-03-23 23:49:11,902 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/8/workernode_map.json
[2026-03-23 19:49:57] 2026-03-23 23:49:11,903 | INFO     | this job has now completed (state=finished)
[2026-03-23 19:49:57] 2026-03-23 23:49:11,903 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-23 19:49:57] 2026-03-23 23:49:11,903 | INFO     | log transfer has been attempted: DONE
[2026-03-23 19:49:57] 2026-03-23 23:49:11,903 | INFO     | job 7063067854 has finished - writing final server update
[2026-03-23 19:49:57] 2026-03-23 23:49:11,903 | INFO     | total number of processed events: 400 (read)
[2026-03-23 19:49:57] 2026-03-23 23:49:11,909 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-7063067854/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 19:49:57] 2026-03-23 23:49:11,910 | INFO     | extracted standard info from prmon json
[2026-03-23 19:49:57] 2026-03-23 23:49:11,910 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 19:49:57] 2026-03-23 23:49:11,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 19:49:57] 2026-03-23 23:49:11,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 19:49:57] 2026-03-23 23:49:11,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 19:49:57] 2026-03-23 23:49:11,917 | INFO     | fitting pss+swap vs Time
[2026-03-23 19:49:57] 2026-03-23 23:49:11,917 | INFO     | sum of square deviations: 17695289920.0
[2026-03-23 19:49:57] 2026-03-23 23:49:11,921 | INFO     | sum of deviations: -50062563299.0
[2026-03-23 19:49:57] 2026-03-23 23:49:11,921 | INFO     | mean x: 1774297974.0
[2026-03-23 19:49:57] 2026-03-23 23:49:11,921 | INFO     | mean y: 2380016.722077922
[2026-03-23 19:49:57] 2026-03-23 23:49:11,921 | INFO     | intersect: 5022128494.211983
[2026-03-23 19:49:57] 2026-03-23 23:49:11,922 | INFO     | chi2: 1.542044040147578
[2026-03-23 19:49:57] 2026-03-23 23:49:11,922 | INFO     | sum of square deviations: 17014774835.0
[2026-03-23 19:49:57] 2026-03-23 23:49:11,925 | INFO     | sum of deviations: -48990806657.99999
[2026-03-23 19:49:57] 2026-03-23 23:49:11,925 | INFO     | mean x: 1774297821.5
[2026-03-23 19:49:57] 2026-03-23 23:49:11,926 | INFO     | mean y: 2380256.9105263157
[2026-03-23 19:49:57] 2026-03-23 23:49:11,926 | INFO     | intersect: 5111133230.121241
[2026-03-23 19:49:57] 2026-03-23 23:49:11,926 | INFO     | chi2: 1.5413774584999687
[2026-03-23 19:49:57] 2026-03-23 23:49:11,926 | INFO     | current chi2=1.5413774584999687 (change=0.04322714723150512 %)
[2026-03-23 19:49:57] 2026-03-23 23:49:11,926 | INFO     | right removable region: 379
[2026-03-23 19:49:57] 2026-03-23 23:49:11,927 | INFO     | sum of square deviations: 17014774835.0
[2026-03-23 19:49:57] 2026-03-23 23:49:11,930 | INFO     | sum of deviations: -98148011708.49998
[2026-03-23 19:49:57] 2026-03-23 23:49:11,930 | INFO     | mean x: 1774298126.5
[2026-03-23 19:49:57] 2026-03-23 23:49:11,930 | INFO     | mean y: 2390712.1868421054
[2026-03-23 19:49:57] 2026-03-23 23:49:11,930 | INFO     | intersect: 10237250413.995619
[2026-03-23 19:49:57] 2026-03-23 23:49:11,931 | INFO     | chi2: 0.18828364357243535
[2026-03-23 19:49:57] 2026-03-23 23:49:11,931 | INFO     | current chi2=0.18828364357243535 (change=87.78999570243039 %)
[2026-03-23 19:49:57] 2026-03-23 23:49:11,931 | INFO     | sum of square deviations: 16351934500.0
[2026-03-23 19:49:57] 2026-03-23 23:49:11,935 | INFO     | sum of deviations: -92258482784.00002
[2026-03-23 19:49:57] 2026-03-23 23:49:11,935 | INFO     | mean x: 1774298279.0
[2026-03-23 19:49:57] 2026-03-23 23:49:11,935 | INFO     | mean y: 2389355.752
[2026-03-23 19:49:57] 2026-03-23 23:49:11,935 | INFO     | intersect: 10013074466.238613
[2026-03-23 19:49:57] 2026-03-23 23:49:11,936 | INFO     | chi2: 0.18710271215827073
[2026-03-23 19:49:57] 2026-03-23 23:49:11,936 | INFO     | current chi2=0.18710271215827073 (change=0.6272087111540811 %)
[2026-03-23 19:49:57] 2026-03-23 23:49:11,936 | INFO     | left removable region: 20
[2026-03-23 19:49:57] 2026-03-23 23:49:11,936 | INFO     | sum of square deviations: 14346910860.0
[2026-03-23 19:49:57] 2026-03-23 23:49:11,940 | INFO     | sum of deviations: -76008087420.0
[2026-03-23 19:49:57] 2026-03-23 23:49:11,940 | INFO     | mean x: 1774298401.0
[2026-03-23 19:49:57] 2026-03-23 23:49:11,940 | INFO     | mean y: 2386248.4233983285
[2026-03-23 19:49:57] 2026-03-23 23:49:11,940 | INFO     | intersect: 9402390840.936369
[2026-03-23 19:49:57] 2026-03-23 23:49:11,940 | INFO     | chi2: 0.17835279064213255
[2026-03-23 19:49:57] 2026-03-23 23:49:11,941 | INFO     | current memory leak: -5.30 B/s (using 359 data points, chi2=0.18)
[2026-03-23 19:49:57] 2026-03-23 23:49:11,941 | INFO     | could have reported an average CPU frequency of 3198 MHz (17 samples)
[2026-03-23 19:49:57] 2026-03-23 23:49:11,941 | INFO     | ..............................
[2026-03-23 19:49:57] 2026-03-23 23:49:11,941 | INFO     | . Timing measurements:
[2026-03-23 19:49:57] 2026-03-23 23:49:11,942 | INFO     | . get job = 0 s
[2026-03-23 19:49:57] 2026-03-23 23:49:11,942 | INFO     | . initial setup = 6 s
[2026-03-23 19:49:57] 2026-03-23 23:49:11,942 | INFO     | . payload setup = 11 s
[2026-03-23 19:49:57] 2026-03-23 23:49:11,942 | INFO     | . stage-in = 0 s
[2026-03-23 19:49:57] 2026-03-23 23:49:11,942 | INFO     | . payload execution = 23487 s
[2026-03-23 19:49:57] 2026-03-23 23:49:11,942 | INFO     | . stage-out = 2 s
[2026-03-23 19:49:57] 2026-03-23 23:49:11,942 | INFO     | . log creation = 0 s
[2026-03-23 19:49:57] 2026-03-23 23:49:11,942 | INFO     | ..............................
[2026-03-23 19:49:57] 2026-03-23 23:49:12,049 | INFO     | time since job start (23518s) is within the limit (345600.0s)
[2026-03-23 19:49:57] 2026-03-23 23:49:12,329 | INFO     | 
[2026-03-23 19:49:57] 2026-03-23 23:49:12,329 | INFO     | job summary report
[2026-03-23 19:49:57] 2026-03-23 23:49:12,329 | INFO     | --------------------------------------------------
[2026-03-23 19:49:57] 2026-03-23 23:49:12,329 | INFO     | PanDA job id: 7063067854
[2026-03-23 19:49:57] 2026-03-23 23:49:12,329 | INFO     | task id: 49177296
[2026-03-23 19:49:57] 2026-03-23 23:49:12,329 | INFO     | errors: (none)
[2026-03-23 19:49:57] 2026-03-23 23:49:12,330 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 19:49:57] 2026-03-23 23:49:12,330 | INFO     | pilot state: finished 
[2026-03-23 19:49:57] 2026-03-23 23:49:12,330 | INFO     | transexitcode: 0
[2026-03-23 19:49:57] 2026-03-23 23:49:12,330 | INFO     | exeerrorcode: 0
[2026-03-23 19:49:57] 2026-03-23 23:49:12,330 | INFO     | exeerrordiag: 
[2026-03-23 19:49:57] 2026-03-23 23:49:12,330 | INFO     | exitcode: 0
[2026-03-23 19:49:57] 2026-03-23 23:49:12,330 | INFO     | exitmsg: OK
[2026-03-23 19:49:57] 2026-03-23 23:49:12,330 | INFO     | cpuconsumptiontime: 93174 s
[2026-03-23 19:49:57] 2026-03-23 23:49:12,330 | INFO     | nevents: 400
[2026-03-23 19:49:57] 2026-03-23 23:49:12,330 | INFO     | neventsw: 0
[2026-03-23 19:49:57] 2026-03-23 23:49:12,331 | INFO     | pid: 106499
[2026-03-23 19:49:57] 2026-03-23 23:49:12,331 | INFO     | pgrp: 106499
[2026-03-23 19:49:57] 2026-03-23 23:49:12,331 | INFO     | corecount: 4
[2026-03-23 19:49:57] 2026-03-23 23:49:12,331 | INFO     | event service: False
[2026-03-23 19:49:57] 2026-03-23 23:49:12,331 | INFO     | sizes: {0: 2280285, 11: 2280285, 23502: 2315252, 23505: 2324528, 23506: 2324560}
[2026-03-23 19:49:57] 2026-03-23 23:49:12,331 | INFO     | --------------------------------------------------
[2026-03-23 19:49:57] 2026-03-23 23:49:12,331 | INFO     | 
[2026-03-23 19:49:57] 2026-03-23 23:49:12,331 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/8
[2026-03-23 19:49:57] 2026-03-23 23:49:12,355 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,356 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,356 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,356 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,357 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,357 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 19:49:57] 2026-03-23 23:49:12,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 19:49:57] 2026-03-23 23:49:12,358 | INFO     | job 7063067854 has completed (purged errors)
[2026-03-23 19:49:57] 2026-03-23 23:49:12,358 | INFO     | overall cleanup function is called
[2026-03-23 19:49:57] 2026-03-23 23:49:13,366 | INFO     | --- collectZombieJob: --- 10, [106499]
[2026-03-23 19:49:57] 2026-03-23 23:49:13,366 | INFO     | zombie collector waiting for pid 106499
[2026-03-23 19:49:57] 2026-03-23 23:49:13,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 19:49:57] 2026-03-23 23:49:13,366 | INFO     | collected zombie processes
[2026-03-23 19:49:57] 2026-03-23 23:49:13,366 | INFO     | will attempt to kill all subprocesses of pid=106499
[2026-03-23 19:49:57] 2026-03-23 23:49:13,590 | INFO     | process IDs to be killed: [106499] (in reverse order)
[2026-03-23 19:49:57] 2026-03-23 23:49:13,665 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 19:49:57] 2026-03-23 23:49:13,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 19:49:57] 2026-03-23 23:49:13,670 | INFO     | did not find any defunct processes belonging to 106499
[2026-03-23 19:49:57] 2026-03-23 23:49:13,676 | INFO     | did not find any defunct processes belonging to 106499
[2026-03-23 19:49:57] 2026-03-23 23:49:13,676 | INFO     | ready for new job
[2026-03-23 19:49:57] 2026-03-23 23:49:13,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 19:49:57] 2026-03-23 23:49:13,678 | INFO     | **************************************
[2026-03-23 19:49:57] 2026-03-23 23:49:13,678 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 19:49:57] 2026-03-23 23:49:13,678 | INFO     | **************************************
[2026-03-23 19:49:57] 2026-03-23 23:49:13,678 | INFO     | 
[2026-03-23 19:49:57] 2026-03-23 23:49:13,680 | INFO     | architecture information:
[2026-03-23 19:49:57] 2026-03-23 23:49:13,681 | INFO     | executing command: cat /etc/os-release
[2026-03-23 19:49:57] 2026-03-23 23:49:13,699 | INFO     | cat /etc/os-release:
[2026-03-23 19:49:57] NAME="CentOS Linux"
[2026-03-23 19:49:57] VERSION="7 (Core)"
[2026-03-23 19:49:57] ID="centos"
[2026-03-23 19:49:57] ID_LIKE="rhel fedora"
[2026-03-23 19:49:57] VERSION_ID="7"
[2026-03-23 19:49:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 19:49:57] ANSI_COLOR="0;31"
[2026-03-23 19:49:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 19:49:57] HOME_URL="https://www.centos.org/"
[2026-03-23 19:49:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 19:49:57] 
[2026-03-23 19:49:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 19:49:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 19:49:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 19:49:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 19:49:57] 
[2026-03-23 19:49:57] 2026-03-23 23:49:13,700 | INFO     | **************************************
[2026-03-23 19:49:57] 2026-03-23 23:49:14,202 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/8
[2026-03-23 19:49:57] 2026-03-23 23:49:14,221 | INFO     | sufficient remaining disk space (406467903488 B)
[2026-03-23 19:49:57] 2026-03-23 23:49:14,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 19:49:57] 2026-03-23 23:49:14,222 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 19:49:57] 2026-03-23 23:49:14,222 | INFO     | update_server=False
[2026-03-23 19:49:57] 2026-03-23 23:49:14,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 19:49:57] 2026-03-23 23:49:14,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 19:49:57] 2026-03-23 23:49:14,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 19:49:57] 2026-03-23 23:49:14,223 | INFO     | aborting loop
[2026-03-23 19:49:57] 2026-03-23 23:49:14,447 | INFO     | all data control threads have been joined
[2026-03-23 19:49:57] 2026-03-23 23:49:15,227 | INFO     | [job] retrieve thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:15,228 | INFO     | [job] job monitor thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:15,251 | INFO     | all job control threads have been joined
[2026-03-23 19:49:57] 2026-03-23 23:49:15,272 | INFO     | [payload] validate_post thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:15,348 | INFO     | all payload control threads have been joined
[2026-03-23 19:49:57] 2026-03-23 23:49:15,388 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:15,452 | INFO     | [data] control thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:15,614 | INFO     | [data] copytool_in thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:16,128 | INFO     | [payload] failed_post thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:16,229 | INFO     | [data] copytool_out thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:16,257 | INFO     | [job] control thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:16,273 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:16,354 | INFO     | [payload] control thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:16,443 | INFO     | [job] validate thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:16,593 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:17,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 19:49:57] 2026-03-23 23:49:17,347 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 19:49:57] 2026-03-23 23:49:18,045 | INFO     | [job] queue monitor thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:21,353 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:24,311 | INFO     | job.realtimelogging is not enabled
[2026-03-23 19:49:57] 2026-03-23 23:49:25,317 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 19:49:57] 2026-03-23 23:49:45,366 | INFO     | PID=101898 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-23 19:49:57] 2026-03-23 23:49:45,366 | INFO     | .. there are 4 such processes running
[2026-03-23 19:49:57] 2026-03-23 23:49:45,367 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 19:49:57] 2026-03-23 23:49:45,367 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 19:49:57] 2026-03-23 23:49:45,367 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 19:49:57] 2026-03-23 23:49:50,441 | INFO     | [monitor] cgroup control has ended
[2026-03-23 19:49:57] 2026-03-23 23:49:51,815 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129303601309504)>', '<ExcThread(monitor, started 129303245207296)>']
[2026-03-23 19:49:57] 2026-03-23 23:49:52,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 19:49:57] 2026-03-23 23:49:52,402 | INFO     | [monitor] control thread has ended
[2026-03-23 19:49:57] 2026-03-23 23:49:56,841 | INFO     | all workflow threads have been joined
[2026-03-23 19:49:57] 2026-03-23 23:49:56,841 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 19:49:57] 2026-03-23 23:49:56,842 | INFO     | traces error code: 0
[2026-03-23 19:49:57] 2026-03-23 23:49:56,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 19:49:57] 2026-03-23 23:49:56,978 [wrapper] ==== pilot stdout END ====
[2026-03-23 19:49:57] 2026-03-23 23:49:56,981 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 19:49:57] 2026-03-23 23:49:56,985 [wrapper] pilotpid: 101898
[2026-03-23 19:49:57] 2026-03-23 23:49:56,989 [wrapper] Pilot exit status: 0
[2026-03-23 19:49:57] 2026-03-23 23:49:57,004 [wrapper] pandaids: 7063067854
[2026-03-23 19:49:57] 2026-03-23 23:49:57,055 [wrapper] cleanup supervisor_pilot  161944 101899
[2026-03-23 19:49:57] 2026-03-23 23:49:57,059 [wrapper] Test setup, not cleaning
[2026-03-23 19:49:57] 2026-03-23 23:49:57,063 [wrapper] apfmon messages muted
[2026-03-23 19:49:57] 2026-03-23 23:49:57,067 [wrapper] ==== wrapper stdout END ====
[2026-03-23 19:49:57] 2026-03-23 23:49:57,071 [wrapper] ==== wrapper stderr END ====
[2026-03-23 19:49:57]  *** Error codes and diagnostics ***
[2026-03-23 19:49:57]     "exeErrorCode": 0,
[2026-03-23 19:49:57]     "exeErrorDiag": "",
[2026-03-23 19:49:57]     "pilotErrorCode": 0,
[2026-03-23 19:49:57]     "pilotErrorDiag": "",
[2026-03-23 19:49:57]  *** Listing of results directory ***
[2026-03-23 19:49:57] total 479480
[2026-03-23 19:49:57] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 23 06:11 queuedata.json
[2026-03-23 19:49:57] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 23 06:11 pilot3.tar.gz
[2026-03-23 19:49:57] -rwx------ 1 whitlerd whitlerd     36322 Mar 23 06:12 runpilot2-wrapper.sh
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 23 13:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 19:49:57] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 23 13:16 run_atlas
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 23 13:16 job.xml
[2026-03-23 19:49:57] -rw-r--r-- 2 whitlerd whitlerd 237717313 Mar 23 13:16 EVNT.49177293._000001.pool.root.1
[2026-03-23 19:49:57] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 23 13:16 shared
[2026-03-23 19:49:57] -rw-r--r-- 2 whitlerd whitlerd    597537 Mar 23 13:16 input.tar.gz
[2026-03-23 19:49:57] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 23 13:16 start_atlas.sh
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 23 13:16 boinc_setup_complete
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd      9201 Mar 23 13:16 init_data.xml
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 23 13:16 boinc_lockfile
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd      2629 Mar 23 13:16 pandaJob.out
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd   1010850 Mar 23 13:17 agis_schedconf.cvmfs.json
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd       437 Mar 23 13:17 workernode_map.json
[2026-03-23 19:49:57] drwx------ 5 whitlerd whitlerd      4096 Mar 23 13:17 pilot3
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd 241579977 Mar 23 19:48 HITS.49177296._000045.pool.root.1
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 23 19:48 boinc_task_state.xml
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd      1042 Mar 23 19:49 memory_monitor_summary.json
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd   1511579 Mar 23 19:49 agis_ddmendpoints.agis.ALL.json
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd    533854 Mar 23 19:49 log.49177296._000045.job.log.tgz.1
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd      6347 Mar 23 19:49 heartbeat.json
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd        95 Mar 23 19:49 pilot_heartbeat.json
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 23 19:49 wrapper_checkpoint.txt
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 23 19:49 boinc_mmap_file
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd      4905 Mar 23 19:49 pilotlog.txt
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd   3335623 Mar 23 19:49 log.49177296._000045.job.log.1
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd       357 Mar 23 19:49 output.list
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 23 19:49 runtime_log
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd   3891200 Mar 23 19:49 result.tar.gz
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd      9020 Mar 23 19:49 runtime_log.err
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd       654 Mar 23 19:49 2ayMDmYRrO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBv9LDmedgSNm.diag
[2026-03-23 19:49:57] -rw-rw-r-- 1 whitlerd whitlerd     21356 Mar 23 19:49 stderr.txt
[2026-03-23 19:49:57] HITS file was successfully produced:
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd 241579977 Mar 23 19:48 shared/HITS.pool.root.1
[2026-03-23 19:49:57]  *** Contents of shared directory: ***
[2026-03-23 19:49:57] total 472476
[2026-03-23 19:49:57] -rw-r--r-- 2 whitlerd whitlerd 237717313 Mar 23 13:16 ATLAS.root_0
[2026-03-23 19:49:57] -rw-r--r-- 2 whitlerd whitlerd    597537 Mar 23 13:16 input.tar.gz
[2026-03-23 19:49:57] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 23 13:16 start_atlas.sh
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd 241579977 Mar 23 19:48 HITS.pool.root.1
[2026-03-23 19:49:57] -rw------- 1 whitlerd whitlerd   3891200 Mar 23 19:49 result.tar.gz
19:49:58 (97692): run_atlas exited; CPU time 93721.554301
19:49:58 (97692): called boinc_finish(0)

</stderr_txt>
]]>

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