Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:33:19 (3723505): wrapper (7.7.26015): starting
11:33:19 (3723505): wrapper: running run_atlas (--nthreads 12)
[2026-03-24 11:33:19] Arguments: --nthreads 12
[2026-03-24 11:33:19] Threads: 12
[2026-03-24 11:33:19] Checking for CVMFS
[2026-03-24 11:33:19] No cvmfs_config command found, will try listing directly
[2026-03-24 11:33:19] CVMFS is ok
[2026-03-24 11:33:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 11:33:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 11:33:19] Further information can be found at the LHC@home message board.
[2026-03-24 11:33:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 11:33:19] Checking for apptainer binary...
[2026-03-24 11:33:19] which: no apptainer in ((null))
[2026-03-24 11:33:19] apptainer is not installed, using version from CVMFS
[2026-03-24 11:33:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 11:33:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-24 11:33:19] apptainer works
[2026-03-24 11:33:19] Set ATHENA_PROC_NUMBER=12
[2026-03-24 11:33:19] Set ATHENA_CORE_NUMBER=12
[2026-03-24 11:33:19] Starting ATLAS job with PandaID=7056900581
[2026-03-24 11:33:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 12:39:45]  *** The last 200 lines of the pilot log: ***
[2026-03-24 12:39:45]  is_altstaged=None
[2026-03-24 12:39:45]  is_tar=False
[2026-03-24 12:39:45]  lfn=log.49176553._000338.job.log.tgz.1
[2026-03-24 12:39:45]  mtime=0
[2026-03-24 12:39:45]  protocol_id=None
[2026-03-24 12:39:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-24 12:39:45]  replicas=None
[2026-03-24 12:39:45]  scope=mc23_13p6TeV
[2026-03-24 12:39:45]  status=None
[2026-03-24 12:39:45]  status_code=0
[2026-03-24 12:39:45]  storage_token=
[2026-03-24 12:39:45]  surl=/var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7056900581/log.49176553._000338.job.log.tgz.1
[2026-03-24 12:39:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/fe/log.49176553._000338.job.log.tgz.1
[2026-03-24 12:39:45]  workdir=None
[2026-03-24 12:39:45] ]
[2026-03-24 12:39:45] 2026-03-24 11:38:58,392 | INFO     | transferring file log.49176553._000338.job.log.tgz.1 from /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7056900581/log.49176553._000338.job.log.tgz.1 to /var/lib/
[2026-03-24 12:39:45] 2026-03-24 11:38:58,392 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7056900581/log.49176553._000338.job.log.tgz.1 /var/lib/boinc/var/slot204/slots/1/
[2026-03-24 12:39:45] 2026-03-24 11:38:58,407 | INFO     | adding to output.list: log.49176553._000338.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/fe/log.49176553._000338.job.log.tg
[2026-03-24 12:39:45] 2026-03-24 11:38:58,407 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-24 12:39:45] 2026-03-24 11:38:58,408 | INFO     | summary of transferred files:
[2026-03-24 12:39:45] 2026-03-24 11:38:58,408 | INFO     |  -- lfn=log.49176553._000338.job.log.tgz.1, status_code=0, status=transferred
[2026-03-24 12:39:45] 2026-03-24 11:38:58,408 | INFO     | stage-out finished correctly
[2026-03-24 12:39:45] 2026-03-24 11:38:59,159 | INFO     | time since job start (3927s) is within the limit (345600.0s)
[2026-03-24 12:39:45] 2026-03-24 11:38:59,457 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-24 12:39:45] 2026-03-24 11:38:59,504 | INFO     | job 7056900581 has state=finished
[2026-03-24 12:39:45] 2026-03-24 11:38:59,505 | INFO     | preparing for final server update for job 7056900581 in state='finished'
[2026-03-24 12:39:45] 2026-03-24 11:38:59,505 | INFO     | reading metadata from: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7056900581/jobReport.json
[2026-03-24 12:39:45] 2026-03-24 11:38:59,506 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot204/slots/1/workernode_map.json
[2026-03-24 12:39:45] 2026-03-24 11:38:59,507 | INFO     | this job has now completed (state=finished)
[2026-03-24 12:39:45] 2026-03-24 11:38:59,507 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 12:39:45] 2026-03-24 11:38:59,507 | INFO     | log transfer has been attempted: DONE
[2026-03-24 12:39:45] 2026-03-24 11:38:59,507 | INFO     | job 7056900581 has finished - writing final server update
[2026-03-24 12:39:45] 2026-03-24 11:38:59,507 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1808094/.job.ad'
[2026-03-24 12:39:45] 2026-03-24 11:38:59,507 | INFO     | total number of processed events: 400 (read)
[2026-03-24 12:39:45] 2026-03-24 11:38:59,527 | INFO     | using path: /var/lib/boinc/var/slot204/slots/1/PanDA_Pilot-7056900581/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 12:39:45] 2026-03-24 11:38:59,527 | INFO     | extracted standard info from prmon json
[2026-03-24 12:39:45] 2026-03-24 11:38:59,527 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 12:39:45] 2026-03-24 11:38:59,527 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 12:39:45] 2026-03-24 11:38:59,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 12:39:45] 2026-03-24 11:38:59,528 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 12:39:45] 2026-03-24 11:38:59,529 | INFO     | fitting pss+swap vs Time
[2026-03-24 12:39:45] 2026-03-24 11:38:59,529 | INFO     | sum of square deviations: 57407588.0
[2026-03-24 12:39:45] 2026-03-24 11:38:59,529 | INFO     | sum of deviations: -1013308271.0000001
[2026-03-24 12:39:45] 2026-03-24 11:38:59,529 | INFO     | mean x: 1774350447.0
[2026-03-24 12:39:45] 2026-03-24 11:38:59,529 | INFO     | mean y: 2728193.2280701753
[2026-03-24 12:39:45] 2026-03-24 11:38:59,529 | INFO     | intersect: 31322002286.360973
[2026-03-24 12:39:45] 2026-03-24 11:38:59,529 | INFO     | chi2: 0.0011957388011016035
[2026-03-24 12:39:45] 2026-03-24 11:38:59,529 | INFO     | current memory leak: -17.65 B/s (using 57 data points, chi2=0.00)
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | could have reported an average CPU frequency of 3574 MHz (6 samples)
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | ..............................
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | . Timing measurements:
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | . get job = 0 s
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | . initial setup = 4 s
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | . payload setup = 6 s
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | . stage-in = 0 s
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | . payload execution = 3903 s
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | . stage-out = 0 s
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | . log creation = 0 s
[2026-03-24 12:39:45] 2026-03-24 11:38:59,530 | INFO     | ..............................
[2026-03-24 12:39:45] 2026-03-24 11:38:59,902 | INFO     | 
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | job summary report
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | --------------------------------------------------
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | PanDA job id: 7056900581
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | task id: 49176553
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | errors: (none)
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | pilot state: finished 
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | transexitcode: 0
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | exeerrorcode: 0
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | exeerrordiag: 
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | exitcode: 0
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | exitmsg: OK
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | cpuconsumptiontime: 43642 s
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | nevents: 400
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | neventsw: 0
[2026-03-24 12:39:45] 2026-03-24 11:38:59,903 | INFO     | pid: 3734174
[2026-03-24 12:39:45] 2026-03-24 11:38:59,904 | INFO     | pgrp: 3734174
[2026-03-24 12:39:45] 2026-03-24 11:38:59,904 | INFO     | corecount: 12
[2026-03-24 12:39:45] 2026-03-24 11:38:59,904 | INFO     | event service: False
[2026-03-24 12:39:45] 2026-03-24 11:38:59,904 | INFO     | sizes: {0: 2279218, 1: 2280348, 11: 2280348, 3914: 2306256, 3915: 2315278, 3916: 2315656}
[2026-03-24 12:39:45] 2026-03-24 11:38:59,904 | INFO     | --------------------------------------------------
[2026-03-24 12:39:45] 2026-03-24 11:38:59,904 | INFO     | 
[2026-03-24 12:39:45] 2026-03-24 11:38:59,904 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/1
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,925 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 12:39:45] 2026-03-24 11:38:59,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,925 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 12:39:45] 2026-03-24 11:38:59,925 | INFO     | job 7056900581 has completed (purged errors)
[2026-03-24 12:39:45] 2026-03-24 11:38:59,925 | INFO     | overall cleanup function is called
[2026-03-24 12:39:45] 2026-03-24 11:39:00,933 | INFO     | --- collectZombieJob: --- 10, [3734174]
[2026-03-24 12:39:45] 2026-03-24 11:39:00,933 | INFO     | zombie collector waiting for pid 3734174
[2026-03-24 12:39:45] 2026-03-24 11:39:00,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 12:39:45] 2026-03-24 11:39:00,933 | INFO     | collected zombie processes
[2026-03-24 12:39:45] 2026-03-24 11:39:00,933 | INFO     | will attempt to kill all subprocesses of pid=3734174
[2026-03-24 12:39:45] 2026-03-24 11:39:01,300 | INFO     | process IDs to be killed: [3734174] (in reverse order)
[2026-03-24 12:39:45] 2026-03-24 11:39:01,467 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 12:39:45] 2026-03-24 11:39:01,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 12:39:45] 2026-03-24 11:39:01,496 | INFO     | did not find any defunct processes belonging to 3734174
[2026-03-24 12:39:45] 2026-03-24 11:39:01,520 | INFO     | did not find any defunct processes belonging to 3734174
[2026-03-24 12:39:45] 2026-03-24 11:39:01,520 | INFO     | ready for new job
[2026-03-24 12:39:45] 2026-03-24 11:39:01,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 12:39:45] 2026-03-24 11:39:01,522 | INFO     | **************************************
[2026-03-24 12:39:45] 2026-03-24 11:39:01,522 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 12:39:45] 2026-03-24 11:39:01,522 | INFO     | **************************************
[2026-03-24 12:39:45] 2026-03-24 11:39:01,522 | INFO     | 
[2026-03-24 12:39:45] 2026-03-24 11:39:01,528 | INFO     | architecture information:
[2026-03-24 12:39:45] 2026-03-24 11:39:01,529 | INFO     | executing command: cat /etc/os-release
[2026-03-24 12:39:45] 2026-03-24 11:39:01,543 | INFO     | cat /etc/os-release:
[2026-03-24 12:39:45] NAME="CentOS Linux"
[2026-03-24 12:39:45] VERSION="7 (Core)"
[2026-03-24 12:39:45] ID="centos"
[2026-03-24 12:39:45] ID_LIKE="rhel fedora"
[2026-03-24 12:39:45] VERSION_ID="7"
[2026-03-24 12:39:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 12:39:45] ANSI_COLOR="0;31"
[2026-03-24 12:39:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 12:39:45] HOME_URL="https://www.centos.org/"
[2026-03-24 12:39:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 12:39:45] 
[2026-03-24 12:39:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 12:39:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 12:39:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 12:39:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 12:39:45] 
[2026-03-24 12:39:45] 2026-03-24 11:39:01,543 | INFO     | **************************************
[2026-03-24 12:39:45] 2026-03-24 11:39:02,046 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/1
[2026-03-24 12:39:45] 2026-03-24 11:39:02,064 | INFO     | sufficient remaining disk space (19379781632 B)
[2026-03-24 12:39:45] 2026-03-24 11:39:02,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 12:39:45] 2026-03-24 11:39:02,064 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 12:39:45] 2026-03-24 11:39:02,064 | INFO     | update_server=False
[2026-03-24 12:39:45] 2026-03-24 11:39:02,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 12:39:45] 2026-03-24 11:39:02,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 12:39:45] 2026-03-24 11:39:02,182 | INFO     | all data control threads have been joined
[2026-03-24 12:39:45] 2026-03-24 11:39:02,289 | INFO     | all job control threads have been joined
[2026-03-24 12:39:45] 2026-03-24 11:39:02,830 | WARNING  | process 3734174 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 12:39:45] 2026-03-24 11:39:02,959 | INFO     | all payload control threads have been joined
[2026-03-24 12:39:45] 2026-03-24 11:39:03,069 | INFO     | [job] retrieve thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:03,135 | INFO     | using path: /var/lib/boinc/var/slot204/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 12:39:45] 2026-03-24 11:39:03,188 | INFO     | [data] control thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:03,294 | INFO     | [job] control thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:03,503 | INFO     | number of running child processes to parent process 3734174: 1
[2026-03-24 12:39:45] 2026-03-24 11:39:03,503 | INFO     | maximum number of monitored processes: 6
[2026-03-24 12:39:45] 2026-03-24 11:39:03,503 | INFO     | aborting job monitoring since job object (job id=7056900581) has expired
[2026-03-24 12:39:45] 2026-03-24 11:39:03,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 12:39:45] 2026-03-24 11:39:03,504 | INFO     | will abort loop
[2026-03-24 12:39:45] 2026-03-24 11:39:03,963 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:03,964 | INFO     | [payload] control thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:04,050 | INFO     | [payload] failed_post thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:04,068 | INFO     | [job] validate thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:04,069 | INFO     | [data] copytool_out thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:04,184 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:04,243 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:04,382 | INFO     | [data] copytool_in thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:04,509 | INFO     | [job] job monitor thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:04,574 | INFO     | [payload] validate_post thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:04,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 12:39:45] 2026-03-24 11:39:05,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 12:39:45] 2026-03-24 11:39:05,595 | INFO     | [job] queue monitor thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:09,515 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:12,317 | INFO     | job.realtimelogging is not enabled
[2026-03-24 12:39:45] 2026-03-24 11:39:13,322 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 12:39:45] 2026-03-24 11:39:32,656 | INFO     | PID=3728342 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-24 12:39:45] 2026-03-24 11:39:32,656 | INFO     | .. there are 15 such processes running
[2026-03-24 12:39:45] 2026-03-24 11:39:32,656 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 12:39:45] 2026-03-24 11:39:32,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 12:39:45] 2026-03-24 11:39:32,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 12:39:45] 2026-03-24 11:39:38,798 | INFO     | [monitor] cgroup control has ended
[2026-03-24 12:39:45] 2026-03-24 11:39:40,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22483020449600)>', '<ExcThread(monitor, started 22482785683200)>']
[2026-03-24 12:39:45] 2026-03-24 11:39:40,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 12:39:45] 2026-03-24 11:39:40,693 | INFO     | [monitor] control thread has ended
[2026-03-24 12:39:45] 2026-03-24 11:39:45,452 | INFO     | all workflow threads have been joined
[2026-03-24 12:39:45] 2026-03-24 11:39:45,452 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 12:39:45] 2026-03-24 11:39:45,452 | INFO     | traces error code: 0
[2026-03-24 12:39:45] 2026-03-24 11:39:45,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 12:39:45] 2026-03-24 11:39:45,591 [wrapper] ==== pilot stdout END ====
[2026-03-24 12:39:45] 2026-03-24 11:39:45,596 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 12:39:45] 2026-03-24 11:39:45,599 [wrapper] pilotpid: 3728342
[2026-03-24 12:39:45] 2026-03-24 11:39:45,600 [wrapper] Pilot exit status: 0
[2026-03-24 12:39:45] 2026-03-24 11:39:45,607 [wrapper] pandaids: 7056900581
[2026-03-24 12:39:45] 2026-03-24 11:39:45,715 [wrapper] cleanup supervisor_pilot 3982393 3728343
[2026-03-24 12:39:45] 2026-03-24 11:39:45,718 [wrapper] Test setup, not cleaning
[2026-03-24 12:39:45] 2026-03-24 11:39:45,720 [wrapper] apfmon messages muted
[2026-03-24 12:39:45] 2026-03-24 11:39:45,723 [wrapper] ==== wrapper stdout END ====
[2026-03-24 12:39:45] 2026-03-24 11:39:45,724 [wrapper] ==== wrapper stderr END ====
[2026-03-24 12:39:45]  *** Error codes and diagnostics ***
[2026-03-24 12:39:45]     "exeErrorCode": 0,
[2026-03-24 12:39:45]     "exeErrorDiag": "",
[2026-03-24 12:39:45]     "pilotErrorCode": 0,
[2026-03-24 12:39:45]     "pilotErrorDiag": "",
[2026-03-24 12:39:45]  *** Listing of results directory ***
[2026-03-24 12:39:45] total 472824
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc    585013 Mar 23 06:30 pilot3.tar.gz
[2026-03-24 12:39:45] -rwx------. 1 boinc boinc     36322 Mar 23 06:46 runpilot2-wrapper.sh
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc      5111 Mar 23 06:52 queuedata.json
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc       100 Mar 24 11:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 12:39:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar 24 11:33 run_atlas
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc       105 Mar 24 11:33 job.xml
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc      6711 Mar 24 11:33 init_data.xml
[2026-03-24 12:39:45] -rw-r--r--. 2 boinc boinc 240186530 Mar 24 11:33 EVNT.49134354._000014.pool.root.1
[2026-03-24 12:39:45] -rw-r--r--. 2 boinc boinc     15845 Mar 24 11:33 start_atlas.sh
[2026-03-24 12:39:45] drwxrwx--x. 2 boinc boinc      4096 Mar 24 11:33 shared
[2026-03-24 12:39:45] -rw-r--r--. 2 boinc boinc    597538 Mar 24 11:33 input.tar.gz
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc         0 Mar 24 11:33 boinc_lockfile
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc      2618 Mar 24 11:33 pandaJob.out
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc   1010550 Mar 24 11:33 agis_schedconf.cvmfs.json
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc   1511579 Mar 24 11:33 agis_ddmendpoints.agis.ALL.json
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc       445 Mar 24 11:33 workernode_map.json
[2026-03-24 12:39:45] drwx------. 5 boinc boinc      4096 Mar 24 11:33 pilot3
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc 238108304 Mar 24 12:38 HITS.49176553._000338.pool.root.1
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc       529 Mar 24 12:38 boinc_task_state.xml
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc        95 Mar 24 12:38 pilot_heartbeat.json
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc      1027 Mar 24 12:38 memory_monitor_summary.json
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc    378228 Mar 24 12:38 log.49176553._000338.job.log.tgz.1
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc      6351 Mar 24 12:38 heartbeat.json
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc      8192 Mar 24 12:39 boinc_mmap_file
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc        27 Mar 24 12:39 wrapper_checkpoint.txt
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc      5435 Mar 24 12:39 pilotlog.txt
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc    590930 Mar 24 12:39 log.49176553._000338.job.log.1
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc       357 Mar 24 12:39 output.list
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc       620 Mar 24 12:39 runtime_log
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc    983040 Mar 24 12:39 result.tar.gz
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc       663 Mar 24 12:39 xYAODm9HnO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOY9LDm6Vmpvn.diag
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc      9223 Mar 24 12:39 runtime_log.err
[2026-03-24 12:39:45] -rw-r--r--. 1 boinc boinc     21370 Mar 24 12:39 stderr.txt
[2026-03-24 12:39:45] HITS file was successfully produced:
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc 238108304 Mar 24 12:38 shared/HITS.pool.root.1
[2026-03-24 12:39:45]  *** Contents of shared directory: ***
[2026-03-24 12:39:45] total 468656
[2026-03-24 12:39:45] -rw-r--r--. 2 boinc boinc 240186530 Mar 24 11:33 ATLAS.root_0
[2026-03-24 12:39:45] -rw-r--r--. 2 boinc boinc     15845 Mar 24 11:33 start_atlas.sh
[2026-03-24 12:39:45] -rw-r--r--. 2 boinc boinc    597538 Mar 24 11:33 input.tar.gz
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc 238108304 Mar 24 12:38 HITS.pool.root.1
[2026-03-24 12:39:45] -rw-------. 1 boinc boinc    983040 Mar 24 12:39 result.tar.gz
12:39:47 (3723505): run_atlas exited; CPU time 43787.852307
12:39:47 (3723505): called boinc_finish(0)

</stderr_txt>
]]>

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