Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:25:17 (533242): wrapper (7.7.26015): starting
04:25:17 (533242): wrapper: running run_atlas (--nthreads 12)
[2026-03-24 04:25:17] Arguments: --nthreads 12
[2026-03-24 04:25:17] Threads: 12
[2026-03-24 04:25:17] Checking for CVMFS
[2026-03-24 04:25:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 04:25:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 04:25:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 04:25:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 04:25:19] 2.13.3.0 417792 265 46456 157612 2 188 2854404 4096000 923 130560 0 485340 99.996 2923 411 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-24 04:25:19] CVMFS is ok
[2026-03-24 04:25:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 04:25:19] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-24 04:25:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-24 04:25:19] Further information can be found at the LHC@home message board.
[2026-03-24 04:25:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 04:25:19] Checking for apptainer binary...
[2026-03-24 04:25:19] apptainer is not installed, using version from CVMFS
[2026-03-24 04:25:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 04:25:19] dc
[2026-03-24 04:25:19] apptainer works
[2026-03-24 04:25:19] Set ATHENA_PROC_NUMBER=12
[2026-03-24 04:25:19] Set ATHENA_CORE_NUMBER=12
[2026-03-24 04:25:19] Starting ATLAS job with PandaID=7062985613
[2026-03-24 04:25:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 05:30:52]  *** The last 200 lines of the pilot log: ***
[2026-03-24 05:30:52]  guid=80f58d01-0c40-4f70-92f0-a3f69ffc8fbc
[2026-03-24 05:30:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-24 05:30:52]  is_altstaged=None
[2026-03-24 05:30:52]  is_tar=False
[2026-03-24 05:30:52]  lfn=log.49269246._000053.job.log.tgz.1
[2026-03-24 05:30:52]  mtime=0
[2026-03-24 05:30:52]  protocol_id=None
[2026-03-24 05:30:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-24 05:30:52]  replicas=None
[2026-03-24 05:30:52]  scope=mc23_13p6TeV
[2026-03-24 05:30:52]  status=None
[2026-03-24 05:30:52]  status_code=0
[2026-03-24 05:30:52]  storage_token=
[2026-03-24 05:30:52]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-7062985613/log.49269246._000053.job.log.tgz.1
[2026-03-24 05:30:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/ec/log.49269246._000053.job.log.tgz.1
[2026-03-24 05:30:52]  workdir=None
[2026-03-24 05:30:52] ]
[2026-03-24 05:30:52] 2026-03-23 18:30:09,388 | INFO     | transferring file log.49269246._000053.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-7062985613/log.49269246._000053.job.log.tgz.1 to /var/lib/boinc
[2026-03-24 05:30:52] 2026-03-23 18:30:09,389 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-7062985613/log.49269246._000053.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.492692
[2026-03-24 05:30:52] 2026-03-23 18:30:09,402 | INFO     | adding to output.list: log.49269246._000053.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/ec/log.49269246._000053.job.log.tg
[2026-03-24 05:30:52] 2026-03-23 18:30:09,403 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-24 05:30:52] 2026-03-23 18:30:09,403 | INFO     | summary of transferred files:
[2026-03-24 05:30:52] 2026-03-23 18:30:09,403 | INFO     |  -- lfn=log.49269246._000053.job.log.tgz.1, status_code=0, status=transferred
[2026-03-24 05:30:52] 2026-03-23 18:30:09,403 | INFO     | stage-out finished correctly
[2026-03-24 05:30:52] 2026-03-23 18:30:09,745 | INFO     | time since job start (3868s) is within the limit (345600.0s)
[2026-03-24 05:30:52] 2026-03-23 18:30:10,631 | INFO     | monitor loop #297: job 0:7062985613 is in state 'finished'
[2026-03-24 05:30:52] 2026-03-23 18:30:10,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-24 05:30:52] 2026-03-23 18:30:11,463 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-24 05:30:52] 2026-03-23 18:30:11,750 | INFO     | time since job start (3870s) is within the limit (345600.0s)
[2026-03-24 05:30:52] 2026-03-23 18:30:12,858 | INFO     | job 7062985613 has state=finished
[2026-03-24 05:30:52] 2026-03-23 18:30:12,858 | INFO     | preparing for final server update for job 7062985613 in state='finished'
[2026-03-24 05:30:52] 2026-03-23 18:30:12,859 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7062985613/jobReport.json
[2026-03-24 05:30:52] 2026-03-23 18:30:12,860 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-24 05:30:52] 2026-03-23 18:30:12,860 | INFO     | this job has now completed (state=finished)
[2026-03-24 05:30:52] 2026-03-23 18:30:12,860 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 05:30:52] 2026-03-23 18:30:12,860 | INFO     | log transfer has been attempted: DONE
[2026-03-24 05:30:52] 2026-03-23 18:30:12,860 | INFO     | job 7062985613 has finished - writing final server update
[2026-03-24 05:30:52] 2026-03-23 18:30:12,860 | INFO     | total number of processed events: 400 (read)
[2026-03-24 05:30:52] 2026-03-23 18:30:12,862 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7062985613/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 05:30:52] 2026-03-23 18:30:12,862 | INFO     | extracted standard info from prmon json
[2026-03-24 05:30:52] 2026-03-23 18:30:12,862 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 05:30:52] 2026-03-23 18:30:12,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 05:30:52] 2026-03-23 18:30:12,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 05:30:52] 2026-03-23 18:30:12,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 05:30:52] 2026-03-23 18:30:12,863 | INFO     | fitting pss+swap vs Time
[2026-03-24 05:30:52] 2026-03-23 18:30:12,863 | INFO     | sum of square deviations: 57407588.0
[2026-03-24 05:30:52] 2026-03-23 18:30:12,863 | INFO     | sum of deviations: -1101189141.0
[2026-03-24 05:30:52] 2026-03-23 18:30:12,863 | INFO     | mean x: 1774288775.0
[2026-03-24 05:30:52] 2026-03-23 18:30:12,863 | INFO     | mean y: 2916764.0877192984
[2026-03-24 05:30:52] 2026-03-23 18:30:12,863 | INFO     | intersect: 34037224772.781487
[2026-03-24 05:30:52] 2026-03-23 18:30:12,863 | INFO     | chi2: 0.029545195797652468
[2026-03-24 05:30:52] 2026-03-23 18:30:12,863 | INFO     | current memory leak: -19.18 B/s (using 57 data points, chi2=0.03)
[2026-03-24 05:30:52] 2026-03-23 18:30:12,863 | INFO     | could have reported an average CPU frequency of 3393 MHz (6 samples)
[2026-03-24 05:30:52] 2026-03-23 18:30:12,863 | INFO     | ..............................
[2026-03-24 05:30:52] 2026-03-23 18:30:12,864 | INFO     | . Timing measurements:
[2026-03-24 05:30:52] 2026-03-23 18:30:12,864 | INFO     | . get job = 0 s
[2026-03-24 05:30:52] 2026-03-23 18:30:12,864 | INFO     | . initial setup = 6 s
[2026-03-24 05:30:52] 2026-03-23 18:30:12,864 | INFO     | . payload setup = 7 s
[2026-03-24 05:30:52] 2026-03-23 18:30:12,864 | INFO     | . stage-in = 0 s
[2026-03-24 05:30:52] 2026-03-23 18:30:12,864 | INFO     | . payload execution = 3846 s
[2026-03-24 05:30:52] 2026-03-23 18:30:12,864 | INFO     | . stage-out = 0 s
[2026-03-24 05:30:52] 2026-03-23 18:30:12,864 | INFO     | . log creation = 0 s
[2026-03-24 05:30:52] 2026-03-23 18:30:12,864 | INFO     | ..............................
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | 
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | job summary report
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | --------------------------------------------------
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | PanDA job id: 7062985613
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | task id: 49269246
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | errors: (none)
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | pilot state: finished 
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | transexitcode: 0
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | exeerrorcode: 0
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | exeerrordiag: 
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | exitcode: 0
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | exitmsg: OK
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | cpuconsumptiontime: 42447 s
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | nevents: 400
[2026-03-24 05:30:52] 2026-03-23 18:30:12,895 | INFO     | neventsw: 0
[2026-03-24 05:30:52] 2026-03-23 18:30:12,896 | INFO     | pid: 541900
[2026-03-24 05:30:52] 2026-03-23 18:30:12,896 | INFO     | pgrp: 541900
[2026-03-24 05:30:52] 2026-03-23 18:30:12,896 | INFO     | corecount: 12
[2026-03-24 05:30:52] 2026-03-23 18:30:12,896 | INFO     | event service: False
[2026-03-24 05:30:52] 2026-03-23 18:30:12,896 | INFO     | sizes: {0: 2280003, 1: 2280293, 11: 2280293, 3857: 2315213, 3859: 2315213, 3861: 2315407}
[2026-03-24 05:30:52] 2026-03-23 18:30:12,896 | INFO     | --------------------------------------------------
[2026-03-24 05:30:52] 2026-03-23 18:30:12,896 | INFO     | 
[2026-03-24 05:30:52] 2026-03-23 18:30:12,896 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-24 05:30:52] 2026-03-23 18:30:12,910 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,910 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,910 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,910 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | job 7062985613 has completed (purged errors)
[2026-03-24 05:30:52] 2026-03-23 18:30:12,911 | INFO     | overall cleanup function is called
[2026-03-24 05:30:52] 2026-03-23 18:30:13,918 | INFO     | --- collectZombieJob: --- 10, [541900]
[2026-03-24 05:30:52] 2026-03-23 18:30:13,918 | INFO     | zombie collector waiting for pid 541900
[2026-03-24 05:30:52] 2026-03-23 18:30:13,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 05:30:52] 2026-03-23 18:30:13,918 | INFO     | collected zombie processes
[2026-03-24 05:30:52] 2026-03-23 18:30:13,918 | INFO     | will attempt to kill all subprocesses of pid=541900
[2026-03-24 05:30:52] 2026-03-23 18:30:13,965 | INFO     | process IDs to be killed: [541900] (in reverse order)
[2026-03-24 05:30:52] 2026-03-23 18:30:13,997 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 05:30:52] 2026-03-23 18:30:13,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 05:30:52] 2026-03-23 18:30:13,998 | INFO     | did not find any defunct processes belonging to 541900
[2026-03-24 05:30:52] 2026-03-23 18:30:13,999 | INFO     | did not find any defunct processes belonging to 541900
[2026-03-24 05:30:52] 2026-03-23 18:30:13,999 | INFO     | ready for new job
[2026-03-24 05:30:52] 2026-03-23 18:30:14,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 05:30:52] 2026-03-23 18:30:14,000 | INFO     | **************************************
[2026-03-24 05:30:52] 2026-03-23 18:30:14,000 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 05:30:52] 2026-03-23 18:30:14,000 | INFO     | **************************************
[2026-03-24 05:30:52] 2026-03-23 18:30:14,000 | INFO     | 
[2026-03-24 05:30:52] 2026-03-23 18:30:14,001 | INFO     | pilot is running in a VM
[2026-03-24 05:30:52] 2026-03-23 18:30:14,001 | INFO     | architecture information:
[2026-03-24 05:30:52] 2026-03-23 18:30:14,001 | INFO     | executing command: cat /etc/os-release
[2026-03-24 05:30:52] 2026-03-23 18:30:14,010 | INFO     | cat /etc/os-release:
[2026-03-24 05:30:52] NAME="CentOS Linux"
[2026-03-24 05:30:52] VERSION="7 (Core)"
[2026-03-24 05:30:52] ID="centos"
[2026-03-24 05:30:52] ID_LIKE="rhel fedora"
[2026-03-24 05:30:52] VERSION_ID="7"
[2026-03-24 05:30:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 05:30:52] ANSI_COLOR="0;31"
[2026-03-24 05:30:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 05:30:52] HOME_URL="https://www.centos.org/"
[2026-03-24 05:30:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 05:30:52] 
[2026-03-24 05:30:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 05:30:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 05:30:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 05:30:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 05:30:52] 
[2026-03-24 05:30:52] 2026-03-23 18:30:14,010 | INFO     | **************************************
[2026-03-24 05:30:52] 2026-03-23 18:30:14,513 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-24 05:30:52] 2026-03-23 18:30:14,526 | INFO     | sufficient remaining disk space (172965756928 B)
[2026-03-24 05:30:52] 2026-03-23 18:30:14,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 05:30:52] 2026-03-23 18:30:14,527 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 05:30:52] 2026-03-23 18:30:14,527 | INFO     | update_server=False
[2026-03-24 05:30:52] 2026-03-23 18:30:14,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 05:30:52] 2026-03-23 18:30:14,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 05:30:52] 2026-03-23 18:30:14,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 05:30:52] 2026-03-23 18:30:14,527 | INFO     | aborting loop
[2026-03-24 05:30:52] 2026-03-23 18:30:14,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 05:30:52] 2026-03-23 18:30:15,532 | INFO     | [job] retrieve thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:15,532 | INFO     | [job] queue monitor thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:15,533 | INFO     | [job] job monitor thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:15,541 | INFO     | all payload control threads have been joined
[2026-03-24 05:30:52] 2026-03-23 18:30:15,559 | INFO     | all data control threads have been joined
[2026-03-24 05:30:52] 2026-03-23 18:30:15,580 | INFO     | [data] copytool_in thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:15,904 | INFO     | all job control threads have been joined
[2026-03-24 05:30:52] 2026-03-23 18:30:16,054 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:16,485 | INFO     | [payload] validate_post thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:16,546 | INFO     | [payload] control thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:16,564 | INFO     | [data] control thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:16,708 | INFO     | [payload] failed_post thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:16,766 | INFO     | [job] validate thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:16,909 | INFO     | [job] control thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:16,958 | INFO     | [data] copytool_out thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:16,969 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:16,972 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:17,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 05:30:52] 2026-03-23 18:30:21,506 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:25,068 | INFO     | job.realtimelogging is not enabled
[2026-03-24 05:30:52] 2026-03-23 18:30:26,074 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 05:30:52] 2026-03-23 18:30:44,891 | INFO     | PID=537384 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-24 05:30:52] 2026-03-23 18:30:44,891 | INFO     | .. there are 2 such processes running
[2026-03-24 05:30:52] 2026-03-23 18:30:44,891 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 05:30:52] 2026-03-23 18:30:44,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 05:30:52] 2026-03-23 18:30:44,891 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 05:30:52] 2026-03-23 18:30:46,760 | INFO     | [monitor] cgroup control has ended
[2026-03-24 05:30:52] 2026-03-23 18:30:47,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127956006586176)>', '<ExcThread(monitor, started 127955321743104)>']
[2026-03-24 05:30:52] 2026-03-23 18:30:47,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 05:30:52] 2026-03-23 18:30:47,907 | INFO     | [monitor] control thread has ended
[2026-03-24 05:30:52] 2026-03-23 18:30:52,624 | INFO     | all workflow threads have been joined
[2026-03-24 05:30:52] 2026-03-23 18:30:52,625 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 05:30:52] 2026-03-23 18:30:52,625 | INFO     | traces error code: 0
[2026-03-24 05:30:52] 2026-03-23 18:30:52,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 05:30:52] 2026-03-23 18:30:52,681 [wrapper] ==== pilot stdout END ====
[2026-03-24 05:30:52] 2026-03-23 18:30:52,683 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 05:30:52] 2026-03-23 18:30:52,684 [wrapper] pilotpid: 537384
[2026-03-24 05:30:52] 2026-03-23 18:30:52,686 [wrapper] Pilot exit status: 0
[2026-03-24 05:30:52] 2026-03-23 18:30:52,692 [wrapper] pandaids: 7062985613
[2026-03-24 05:30:52] 2026-03-23 18:30:52,710 [wrapper] cleanup supervisor_pilot  560003 537385
[2026-03-24 05:30:52] 2026-03-23 18:30:52,712 [wrapper] Test setup, not cleaning
[2026-03-24 05:30:52] 2026-03-23 18:30:52,714 [wrapper] apfmon messages muted
[2026-03-24 05:30:52] 2026-03-23 18:30:52,716 [wrapper] ==== wrapper stdout END ====
[2026-03-24 05:30:52] 2026-03-23 18:30:52,717 [wrapper] ==== wrapper stderr END ====
[2026-03-24 05:30:52]  *** Error codes and diagnostics ***
[2026-03-24 05:30:52]     "exeErrorCode": 0,
[2026-03-24 05:30:52]     "exeErrorDiag": "",
[2026-03-24 05:30:52]     "pilotErrorCode": 0,
[2026-03-24 05:30:52]     "pilotErrorDiag": "",
[2026-03-24 05:30:52]  *** Listing of results directory ***
[2026-03-24 05:30:52] total 479100
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc    585013 Mar 23 19:14 pilot3.tar.gz
[2026-03-24 05:30:52] -rwx------ 1 boinc boinc     36322 Mar 23 19:18 runpilot2-wrapper.sh
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc      5111 Mar 23 19:21 queuedata.json
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc       100 Mar 24 04:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 05:30:52] -rwxr-xr-x 1 boinc boinc      7986 Mar 24 04:25 run_atlas
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc       105 Mar 24 04:25 job.xml
[2026-03-24 05:30:52] -rw-r--r-- 2 boinc boinc 253512936 Mar 24 04:25 EVNT.49124147._000001.pool.root.1
[2026-03-24 05:30:52] -rw-r--r-- 2 boinc boinc    597539 Mar 24 04:25 input.tar.gz
[2026-03-24 05:30:52] drwxrwx--x 2 boinc boinc      4096 Mar 24 04:25 shared
[2026-03-24 05:30:52] -rw-r--r-- 2 boinc boinc     15845 Mar 24 04:25 start_atlas.sh
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc         0 Mar 24 04:25 boinc_setup_complete
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc      6366 Mar 24 04:25 init_data.xml
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc         0 Mar 24 04:25 boinc_lockfile
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc      2582 Mar 24 04:25 pandaJob.out
[2026-03-24 05:30:52] -rw------- 1 boinc boinc   1010850 Mar 24 04:25 agis_schedconf.cvmfs.json
[2026-03-24 05:30:52] -rw------- 1 boinc boinc   1511579 Mar 24 04:25 agis_ddmendpoints.agis.ALL.json
[2026-03-24 05:30:52] -rw------- 1 boinc boinc       416 Mar 24 04:25 workernode_map.json
[2026-03-24 05:30:52] drwx------ 5 boinc boinc      4096 Mar 24 04:25 pilot3
[2026-03-24 05:30:52] -rw------- 1 boinc boinc 231212243 Mar 24 05:29 HITS.49269246._000053.pool.root.1
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc       529 Mar 24 05:30 boinc_task_state.xml
[2026-03-24 05:30:52] -rw------- 1 boinc boinc      1016 Mar 24 05:30 memory_monitor_summary.json
[2026-03-24 05:30:52] -rw------- 1 boinc boinc    376200 Mar 24 05:30 log.49269246._000053.job.log.tgz.1
[2026-03-24 05:30:52] -rw------- 1 boinc boinc        95 Mar 24 05:30 pilot_heartbeat.json
[2026-03-24 05:30:52] -rw------- 1 boinc boinc      6251 Mar 24 05:30 heartbeat.json
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc      8192 Mar 24 05:30 boinc_mmap_file
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc        27 Mar 24 05:30 wrapper_checkpoint.txt
[2026-03-24 05:30:52] -rw------- 1 boinc boinc      4960 Mar 24 05:30 pilotlog.txt
[2026-03-24 05:30:52] -rw------- 1 boinc boinc    591617 Mar 24 05:30 log.49269246._000053.job.log.1
[2026-03-24 05:30:52] -rw------- 1 boinc boinc       357 Mar 24 05:30 output.list
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc       620 Mar 24 05:30 runtime_log
[2026-03-24 05:30:52] -rw------- 1 boinc boinc    983040 Mar 24 05:30 result.tar.gz
[2026-03-24 05:30:52] -rw------- 1 boinc boinc       636 Mar 24 05:30 MIJLDmlfpO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAs9LDmQM3BAn.diag
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc      8856 Mar 24 05:30 runtime_log.err
[2026-03-24 05:30:52] -rw-r--r-- 1 boinc boinc     21422 Mar 24 05:30 stderr.txt
[2026-03-24 05:30:52] HITS file was successfully produced:
[2026-03-24 05:30:52] -rw------- 1 boinc boinc 231212243 Mar 24 05:29 shared/HITS.pool.root.1
[2026-03-24 05:30:52]  *** Contents of shared directory: ***
[2026-03-24 05:30:52] total 474936
[2026-03-24 05:30:52] -rw-r--r-- 2 boinc boinc 253512936 Mar 24 04:25 ATLAS.root_0
[2026-03-24 05:30:52] -rw-r--r-- 2 boinc boinc    597539 Mar 24 04:25 input.tar.gz
[2026-03-24 05:30:52] -rw-r--r-- 2 boinc boinc     15845 Mar 24 04:25 start_atlas.sh
[2026-03-24 05:30:52] -rw------- 1 boinc boinc 231212243 Mar 24 05:29 HITS.pool.root.1
[2026-03-24 05:30:52] -rw------- 1 boinc boinc    983040 Mar 24 05:30 result.tar.gz
05:30:54 (533242): run_atlas exited; CPU time 42458.046121
05:30:54 (533242): called boinc_finish(0)

</stderr_txt>
]]>

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