Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:31:42 (256414): wrapper (7.7.26015): starting
11:31:42 (256414): wrapper: running run_atlas (--nthreads 12)
[2026-03-24 11:31:42] Arguments: --nthreads 12
[2026-03-24 11:31:42] Threads: 12
[2026-03-24 11:31:42] Checking for CVMFS
[2026-03-24 11:31:42] No cvmfs_config command found, will try listing directly
[2026-03-24 11:31:42] CVMFS is ok
[2026-03-24 11:31:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 11:31:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 11:31:42] Further information can be found at the LHC@home message board.
[2026-03-24 11:31:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 11:31:42] Checking for apptainer binary...
[2026-03-24 11:31:42] which: no apptainer in ((null))
[2026-03-24 11:31:42] apptainer is not installed, using version from CVMFS
[2026-03-24 11:31:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 11:31:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-24 11:31:42] apptainer works
[2026-03-24 11:31:42] Set ATHENA_PROC_NUMBER=12
[2026-03-24 11:31:42] Set ATHENA_CORE_NUMBER=12
[2026-03-24 11:31:42] Starting ATLAS job with PandaID=7062824528
[2026-03-24 11:31:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 12:54:08]  *** The last 200 lines of the pilot log: ***
[2026-03-24 12:54:08]  filesize=384636
[2026-03-24 12:54:08]  filetype=log
[2026-03-24 12:54:08]  guid=085c498c-9d05-4264-9b66-5b0ae90f9396
[2026-03-24 12:54:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-24 12:54:08]  is_altstaged=None
[2026-03-24 12:54:08]  is_tar=False
[2026-03-24 12:54:08]  lfn=log.49178289._000107.job.log.tgz.1
[2026-03-24 12:54:08]  mtime=0
[2026-03-24 12:54:08]  protocol_id=None
[2026-03-24 12:54:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-24 12:54:08]  replicas=None
[2026-03-24 12:54:08]  scope=mc23_13p6TeV
[2026-03-24 12:54:08]  status=None
[2026-03-24 12:54:08]  status_code=0
[2026-03-24 12:54:08]  storage_token=
[2026-03-24 12:54:08]  surl=/var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062824528/log.49178289._000107.job.log.tgz.1
[2026-03-24 12:54:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/1a/log.49178289._000107.job.log.tgz.1
[2026-03-24 12:54:08]  workdir=None
[2026-03-24 12:54:08] ]
[2026-03-24 12:54:08] 2026-03-24 11:53:26,196 | INFO     | transferring file log.49178289._000107.job.log.tgz.1 from /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062824528/log.49178289._000107.job.log.tgz.1 to /var/lib/
[2026-03-24 12:54:08] 2026-03-24 11:53:26,196 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062824528/log.49178289._000107.job.log.tgz.1 /var/lib/boinc/var/slot120/slots/2/
[2026-03-24 12:54:08] 2026-03-24 11:53:26,214 | INFO     | adding to output.list: log.49178289._000107.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/1a/log.49178289._000107.job.log.tg
[2026-03-24 12:54:08] 2026-03-24 11:53:26,215 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-24 12:54:08] 2026-03-24 11:53:26,215 | INFO     | summary of transferred files:
[2026-03-24 12:54:08] 2026-03-24 11:53:26,215 | INFO     |  -- lfn=log.49178289._000107.job.log.tgz.1, status_code=0, status=transferred
[2026-03-24 12:54:08] 2026-03-24 11:53:26,215 | INFO     | stage-out finished correctly
[2026-03-24 12:54:08] 2026-03-24 11:53:27,012 | INFO     | time since job start (4893s) is within the limit (345600.0s)
[2026-03-24 12:54:08] 2026-03-24 11:53:27,994 | INFO     | monitor loop #361: job 0:7062824528 is in state 'finished'
[2026-03-24 12:54:08] 2026-03-24 11:53:27,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-24 12:54:08] 2026-03-24 11:53:28,373 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-24 12:54:08] 2026-03-24 11:53:28,420 | INFO     | job 7062824528 has state=finished
[2026-03-24 12:54:08] 2026-03-24 11:53:28,420 | INFO     | preparing for final server update for job 7062824528 in state='finished'
[2026-03-24 12:54:08] 2026-03-24 11:53:28,420 | INFO     | reading metadata from: /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062824528/jobReport.json
[2026-03-24 12:54:08] 2026-03-24 11:53:28,422 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot120/slots/2/workernode_map.json
[2026-03-24 12:54:08] 2026-03-24 11:53:28,422 | INFO     | this job has now completed (state=finished)
[2026-03-24 12:54:08] 2026-03-24 11:53:28,422 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 12:54:08] 2026-03-24 11:53:28,422 | INFO     | log transfer has been attempted: DONE
[2026-03-24 12:54:08] 2026-03-24 11:53:28,422 | INFO     | job 7062824528 has finished - writing final server update
[2026-03-24 12:54:08] 2026-03-24 11:53:28,422 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1591888/.job.ad'
[2026-03-24 12:54:08] 2026-03-24 11:53:28,422 | INFO     | total number of processed events: 400 (read)
[2026-03-24 12:54:08] 2026-03-24 11:53:28,439 | INFO     | using path: /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062824528/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 12:54:08] 2026-03-24 11:53:28,440 | INFO     | extracted standard info from prmon json
[2026-03-24 12:54:08] 2026-03-24 11:53:28,440 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 12:54:08] 2026-03-24 11:53:28,440 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 12:54:08] 2026-03-24 11:53:28,440 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 12:54:08] 2026-03-24 11:53:28,440 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 12:54:08] 2026-03-24 11:53:28,441 | INFO     | fitting pss+swap vs Time
[2026-03-24 12:54:08] 2026-03-24 11:53:28,441 | INFO     | sum of square deviations: 120605052.0
[2026-03-24 12:54:08] 2026-03-24 11:53:28,441 | INFO     | sum of deviations: -2662354394.0
[2026-03-24 12:54:08] 2026-03-24 11:53:28,441 | INFO     | mean x: 1774350838.0
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | mean y: 2740010.397260274
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | intersect: 39171503438.70607
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | chi2: 0.00415115558528381
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | current memory leak: -22.07 B/s (using 73 data points, chi2=0.00)
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | could have reported an average CPU frequency of 3587 MHz (6 samples)
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | ..............................
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | . Timing measurements:
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | . get job = 0 s
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | . initial setup = 4 s
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | . payload setup = 7 s
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | . stage-in = 0 s
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | . payload execution = 4869 s
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | . stage-out = 0 s
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | . log creation = 0 s
[2026-03-24 12:54:08] 2026-03-24 11:53:28,442 | INFO     | ..............................
[2026-03-24 12:54:08] 2026-03-24 11:53:28,490 | INFO     | 
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | job summary report
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | --------------------------------------------------
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | PanDA job id: 7062824528
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | task id: 49178289
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | errors: (none)
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | pilot state: finished 
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | transexitcode: 0
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | exeerrorcode: 0
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | exeerrordiag: 
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | exitcode: 0
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | exitmsg: OK
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | cpuconsumptiontime: 53307 s
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | nevents: 400
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | neventsw: 0
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | pid: 267365
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | pgrp: 267365
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | corecount: 12
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | event service: False
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | sizes: {0: 2279953, 1: 2280357, 11: 2280357, 4880: 2306695, 4881: 2315717, 4883: 2316095}
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | --------------------------------------------------
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | 
[2026-03-24 12:54:08] 2026-03-24 11:53:28,491 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/2
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | job 7062824528 has completed (purged errors)
[2026-03-24 12:54:08] 2026-03-24 11:53:28,511 | INFO     | overall cleanup function is called
[2026-03-24 12:54:08] 2026-03-24 11:53:29,518 | INFO     | --- collectZombieJob: --- 10, [267365]
[2026-03-24 12:54:08] 2026-03-24 11:53:29,518 | INFO     | zombie collector waiting for pid 267365
[2026-03-24 12:54:08] 2026-03-24 11:53:29,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 12:54:08] 2026-03-24 11:53:29,518 | INFO     | collected zombie processes
[2026-03-24 12:54:08] 2026-03-24 11:53:29,518 | INFO     | will attempt to kill all subprocesses of pid=267365
[2026-03-24 12:54:08] 2026-03-24 11:53:29,877 | INFO     | process IDs to be killed: [267365] (in reverse order)
[2026-03-24 12:54:08] 2026-03-24 11:53:30,041 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 12:54:08] 2026-03-24 11:53:30,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 12:54:08] 2026-03-24 11:53:30,066 | INFO     | did not find any defunct processes belonging to 267365
[2026-03-24 12:54:08] 2026-03-24 11:53:30,090 | INFO     | did not find any defunct processes belonging to 267365
[2026-03-24 12:54:08] 2026-03-24 11:53:30,090 | INFO     | ready for new job
[2026-03-24 12:54:08] 2026-03-24 11:53:30,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 12:54:08] 2026-03-24 11:53:30,091 | INFO     | **************************************
[2026-03-24 12:54:08] 2026-03-24 11:53:30,091 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 12:54:08] 2026-03-24 11:53:30,091 | INFO     | **************************************
[2026-03-24 12:54:08] 2026-03-24 11:53:30,091 | INFO     | 
[2026-03-24 12:54:08] 2026-03-24 11:53:30,097 | INFO     | architecture information:
[2026-03-24 12:54:08] 2026-03-24 11:53:30,097 | INFO     | executing command: cat /etc/os-release
[2026-03-24 12:54:08] 2026-03-24 11:53:30,109 | INFO     | cat /etc/os-release:
[2026-03-24 12:54:08] NAME="CentOS Linux"
[2026-03-24 12:54:08] VERSION="7 (Core)"
[2026-03-24 12:54:08] ID="centos"
[2026-03-24 12:54:08] ID_LIKE="rhel fedora"
[2026-03-24 12:54:08] VERSION_ID="7"
[2026-03-24 12:54:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 12:54:08] ANSI_COLOR="0;31"
[2026-03-24 12:54:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 12:54:08] HOME_URL="https://www.centos.org/"
[2026-03-24 12:54:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 12:54:08] 
[2026-03-24 12:54:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 12:54:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 12:54:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 12:54:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 12:54:08] 
[2026-03-24 12:54:08] 2026-03-24 11:53:30,110 | INFO     | **************************************
[2026-03-24 12:54:08] 2026-03-24 11:53:30,612 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/2
[2026-03-24 12:54:08] 2026-03-24 11:53:30,624 | INFO     | sufficient remaining disk space (19641925632 B)
[2026-03-24 12:54:08] 2026-03-24 11:53:30,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 12:54:08] 2026-03-24 11:53:30,625 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 12:54:08] 2026-03-24 11:53:30,625 | INFO     | update_server=False
[2026-03-24 12:54:08] 2026-03-24 11:53:30,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 12:54:08] 2026-03-24 11:53:30,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 12:54:08] 2026-03-24 11:53:31,232 | INFO     | all data control threads have been joined
[2026-03-24 12:54:08] 2026-03-24 11:53:31,275 | INFO     | all job control threads have been joined
[2026-03-24 12:54:08] 2026-03-24 11:53:31,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 12:54:08] 2026-03-24 11:53:31,502 | INFO     | aborting loop
[2026-03-24 12:54:08] 2026-03-24 11:53:31,531 | INFO     | all payload control threads have been joined
[2026-03-24 12:54:08] 2026-03-24 11:53:31,630 | INFO     | [job] retrieve thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:31,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 12:54:08] 2026-03-24 11:53:32,080 | INFO     | [job] validate thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:32,237 | INFO     | [data] control thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:32,251 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:32,280 | INFO     | [job] control thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:32,367 | INFO     | [payload] failed_post thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:32,382 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:32,465 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:32,507 | INFO     | [job] job monitor thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:32,536 | INFO     | [payload] control thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:32,704 | INFO     | [data] copytool_in thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:32,811 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:33,061 | INFO     | [payload] validate_post thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:33,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 12:54:08] 2026-03-24 11:53:33,778 | INFO     | [data] copytool_out thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:34,505 | INFO     | [job] queue monitor thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:53:34,631 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 12:54:08] 2026-03-24 11:54:00,552 | INFO     | PID=261283 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-24 12:54:08] 2026-03-24 11:54:00,553 | INFO     | .. there are 15 such processes running
[2026-03-24 12:54:08] 2026-03-24 11:54:00,553 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 12:54:08] 2026-03-24 11:54:00,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 12:54:08] 2026-03-24 11:54:00,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 12:54:08] 2026-03-24 11:54:01,629 | INFO     | [monitor] cgroup control has ended
[2026-03-24 12:54:08] 2026-03-24 11:54:03,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23027490383680)>', '<ExcThread(monitor, started 23027254576896)>']
[2026-03-24 12:54:08] 2026-03-24 11:54:04,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 12:54:08] 2026-03-24 11:54:04,573 | INFO     | [monitor] control thread has ended
[2026-03-24 12:54:08] 2026-03-24 11:54:08,637 | INFO     | all workflow threads have been joined
[2026-03-24 12:54:08] 2026-03-24 11:54:08,638 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 12:54:08] 2026-03-24 11:54:08,638 | INFO     | traces error code: 0
[2026-03-24 12:54:08] 2026-03-24 11:54:08,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 12:54:08] 2026-03-24 11:54:08,740 [wrapper] ==== pilot stdout END ====
[2026-03-24 12:54:08] 2026-03-24 11:54:08,743 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 12:54:08] 2026-03-24 11:54:08,745 [wrapper] pilotpid: 261283
[2026-03-24 12:54:08] 2026-03-24 11:54:08,751 [wrapper] Pilot exit status: 0
[2026-03-24 12:54:08] 2026-03-24 11:54:08,760 [wrapper] pandaids: 7062824528
[2026-03-24 12:54:08] 2026-03-24 11:54:08,868 [wrapper] cleanup supervisor_pilot  564658 261284
[2026-03-24 12:54:08] 2026-03-24 11:54:08,870 [wrapper] Test setup, not cleaning
[2026-03-24 12:54:08] 2026-03-24 11:54:08,872 [wrapper] apfmon messages muted
[2026-03-24 12:54:08] 2026-03-24 11:54:08,873 [wrapper] ==== wrapper stdout END ====
[2026-03-24 12:54:08] 2026-03-24 11:54:08,874 [wrapper] ==== wrapper stderr END ====
[2026-03-24 12:54:08]  *** Error codes and diagnostics ***
[2026-03-24 12:54:08]     "exeErrorCode": 0,
[2026-03-24 12:54:08]     "exeErrorDiag": "",
[2026-03-24 12:54:08]     "pilotErrorCode": 0,
[2026-03-24 12:54:08]     "pilotErrorDiag": "",
[2026-03-24 12:54:08]  *** Listing of results directory ***
[2026-03-24 12:54:08] total 477400
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc    585013 Mar 23 06:30 pilot3.tar.gz
[2026-03-24 12:54:08] -rwx------. 1 boinc boinc     36322 Mar 23 06:42 runpilot2-wrapper.sh
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc      5111 Mar 23 06:47 queuedata.json
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc       100 Mar 24 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 12:54:08] -rwxr-xr-x. 1 boinc boinc      7986 Mar 24 11:31 run_atlas
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc       105 Mar 24 11:31 job.xml
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc      6711 Mar 24 11:31 init_data.xml
[2026-03-24 12:54:08] -rw-r--r--. 2 boinc boinc 243120672 Mar 24 11:31 EVNT.49128472._000005.pool.root.1
[2026-03-24 12:54:08] -rw-r--r--. 2 boinc boinc     15845 Mar 24 11:31 start_atlas.sh
[2026-03-24 12:54:08] drwxrwx--x. 2 boinc boinc      4096 Mar 24 11:31 shared
[2026-03-24 12:54:08] -rw-r--r--. 2 boinc boinc    597535 Mar 24 11:31 input.tar.gz
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc         0 Mar 24 11:31 boinc_lockfile
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc      2628 Mar 24 11:31 pandaJob.out
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc   1010550 Mar 24 11:31 agis_schedconf.cvmfs.json
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc   1511579 Mar 24 11:31 agis_ddmendpoints.agis.ALL.json
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc       444 Mar 24 11:31 workernode_map.json
[2026-03-24 12:54:08] drwx------. 5 boinc boinc      4096 Mar 24 11:31 pilot3
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc       529 Mar 24 12:52 boinc_task_state.xml
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc 239580748 Mar 24 12:52 HITS.49178289._000107.pool.root.1
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc      1028 Mar 24 12:53 memory_monitor_summary.json
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc    384636 Mar 24 12:53 log.49178289._000107.job.log.tgz.1
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc      6348 Mar 24 12:53 heartbeat.json
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc      8192 Mar 24 12:53 boinc_mmap_file
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc        27 Mar 24 12:53 wrapper_checkpoint.txt
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc        95 Mar 24 12:54 pilot_heartbeat.json
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc      4829 Mar 24 12:54 pilotlog.txt
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc    723244 Mar 24 12:54 log.49178289._000107.job.log.1
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc       357 Mar 24 12:54 output.list
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc       620 Mar 24 12:54 runtime_log
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc   1126400 Mar 24 12:54 result.tar.gz
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc      9223 Mar 24 12:54 runtime_log.err
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc       663 Mar 24 12:54 5s7LDmXEnO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcU9LDmznQtJm.diag
[2026-03-24 12:54:08] -rw-r--r--. 1 boinc boinc     20884 Mar 24 12:54 stderr.txt
[2026-03-24 12:54:08] HITS file was successfully produced:
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc 239580748 Mar 24 12:52 shared/HITS.pool.root.1
[2026-03-24 12:54:08]  *** Contents of shared directory: ***
[2026-03-24 12:54:08] total 473100
[2026-03-24 12:54:08] -rw-r--r--. 2 boinc boinc 243120672 Mar 24 11:31 ATLAS.root_0
[2026-03-24 12:54:08] -rw-r--r--. 2 boinc boinc     15845 Mar 24 11:31 start_atlas.sh
[2026-03-24 12:54:08] -rw-r--r--. 2 boinc boinc    597535 Mar 24 11:31 input.tar.gz
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc 239580748 Mar 24 12:52 HITS.pool.root.1
[2026-03-24 12:54:08] -rw-------. 1 boinc boinc   1126400 Mar 24 12:54 result.tar.gz
12:54:10 (256414): run_atlas exited; CPU time 53485.968686
12:54:10 (256414): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN