Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:33:58 (16664): wrapper (7.7.26015): starting
06:33:58 (16664): wrapper: running run_atlas (--nthreads 8)
[2026-03-23 06:33:58] Arguments: --nthreads 8
[2026-03-23 06:33:58] Threads: 8
[2026-03-23 06:33:58] Checking for CVMFS
[2026-03-23 06:33:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 06:33:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 06:33:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 06:33:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 06:33:59] 2.11.2.0 2937 120605 86428 157610 1 51 11303697 20275200 1 130560 0 34134595 99.907 6297118 26287 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-23 06:33:59] CVMFS is ok
[2026-03-23 06:33:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 06:33:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 06:33:59] Further information can be found at the LHC@home message board.
[2026-03-23 06:33:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 06:33:59] Checking for apptainer binary...
[2026-03-23 06:33:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 06:33:59] Running /usr/bin/apptainer --version
[2026-03-23 06:33:59] apptainer version 1.3.2-1.el7
[2026-03-23 06:33:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 06:34:00] c-115-5.aglt2.org
[2026-03-23 06:34:00] apptainer works
[2026-03-23 06:34:00] Set ATHENA_PROC_NUMBER=8
[2026-03-23 06:34:00] Set ATHENA_CORE_NUMBER=8
[2026-03-23 06:34:01] Starting ATLAS job with PandaID=7062813121
[2026-03-23 06:34:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:10:30 (14777): wrapper (7.7.26015): starting
07:10:30 (14777): wrapper: running run_atlas (--nthreads 8)
[2026-03-23 07:10:30] Arguments: --nthreads 8
[2026-03-23 07:10:30] Threads: 8
[2026-03-23 07:10:30] This job has been restarted, cleaning up previous attempt
[2026-03-23 07:10:30] Checking for CVMFS
[2026-03-23 07:10:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 07:10:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 07:10:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 07:10:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 07:10:31] 2.11.2.0 2937 120642 92564 157610 1 190 11365604 20275201 1 130560 0 34200415 99.907 6300072 26289 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-23 07:10:31] CVMFS is ok
[2026-03-23 07:10:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 07:10:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 07:10:31] Further information can be found at the LHC@home message board.
[2026-03-23 07:10:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 07:10:31] Checking for apptainer binary...
[2026-03-23 07:10:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 07:10:31] Running /usr/bin/apptainer --version
[2026-03-23 07:10:31] apptainer version 1.3.2-1.el7
[2026-03-23 07:10:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 07:10:33] c-115-5.aglt2.org
[2026-03-23 07:10:33] apptainer works
[2026-03-23 07:10:33] Set ATHENA_PROC_NUMBER=8
[2026-03-23 07:10:33] Set ATHENA_CORE_NUMBER=8
[2026-03-23 07:10:33] Starting ATLAS job with PandaID=7062813121
[2026-03-23 07:10:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 12:48:30]  *** The last 200 lines of the pilot log: ***
[2026-03-23 12:48:30] 2026-03-23 16:47:44,782 | INFO     | chi2: 1.51420473697389
[2026-03-23 12:48:30] 2026-03-23 16:47:44,782 | INFO     | current chi2=1.51420473697389 (change=0.02595070625630395 %)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,783 | INFO     | right removable region: 325
[2026-03-23 12:48:30] 2026-03-23 16:47:44,783 | INFO     | sum of square deviations: 10743038637.5
[2026-03-23 12:48:30] 2026-03-23 16:47:44,785 | INFO     | sum of deviations: 50328374397.99999
[2026-03-23 12:48:30] 2026-03-23 16:47:44,785 | INFO     | mean x: 1774274500.5
[2026-03-23 12:48:30] 2026-03-23 16:47:44,785 | INFO     | mean y: 2575024.3496932513
[2026-03-23 12:48:30] 2026-03-23 16:47:44,786 | INFO     | intersect: -8309444913.313723
[2026-03-23 12:48:30] 2026-03-23 16:47:44,786 | INFO     | chi2: 0.09661599787626995
[2026-03-23 12:48:30] 2026-03-23 16:47:44,786 | INFO     | current chi2=0.09661599787626995 (change=93.6210128667607 %)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,787 | INFO     | sum of square deviations: 10256266720.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,789 | INFO     | sum of deviations: 33269473017.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,789 | INFO     | mean x: 1774274653.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,789 | INFO     | mean y: 2580351.2211838006
[2026-03-23 12:48:30] 2026-03-23 16:47:44,789 | INFO     | intersect: -5752845507.353849
[2026-03-23 12:48:30] 2026-03-23 16:47:44,790 | INFO     | chi2: 0.006906793502225299
[2026-03-23 12:48:30] 2026-03-23 16:47:44,790 | INFO     | current chi2=0.006906793502225299 (change=92.85129413964094 %)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,790 | INFO     | sum of square deviations: 9784425315.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,792 | INFO     | sum of deviations: 28514479768.000004
[2026-03-23 12:48:30] 2026-03-23 16:47:44,792 | INFO     | mean x: 1774274805.5
[2026-03-23 12:48:30] 2026-03-23 16:47:44,793 | INFO     | mean y: 2581886.5379746836
[2026-03-23 12:48:30] 2026-03-23 16:47:44,793 | INFO     | intersect: -5168138050.047478
[2026-03-23 12:48:30] 2026-03-23 16:47:44,793 | INFO     | chi2: 0.0032720809665009415
[2026-03-23 12:48:30] 2026-03-23 16:47:44,793 | INFO     | current chi2=0.0032720809665009415 (change=52.625180332281396 %)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,794 | INFO     | sum of square deviations: 9327281860.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,796 | INFO     | sum of deviations: 25193353495.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,796 | INFO     | mean x: 1774274958.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,796 | INFO     | mean y: 2582993.498392283
[2026-03-23 12:48:30] 2026-03-23 16:47:44,796 | INFO     | intersect: -4789803136.260989
[2026-03-23 12:48:30] 2026-03-23 16:47:44,796 | INFO     | chi2: 0.0018470166377564598
[2026-03-23 12:48:30] 2026-03-23 16:47:44,797 | INFO     | current chi2=0.0018470166377564598 (change=43.552233069232386 %)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,797 | INFO     | sum of square deviations: 8884603792.5
[2026-03-23 12:48:30] 2026-03-23 16:47:44,799 | INFO     | sum of deviations: 22725110922.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,799 | INFO     | mean x: 1774275110.5
[2026-03-23 12:48:30] 2026-03-23 16:47:44,799 | INFO     | mean y: 2583843.5359477126
[2026-03-23 12:48:30] 2026-03-23 16:47:44,799 | INFO     | intersect: -4535671281.165642
[2026-03-23 12:48:30] 2026-03-23 16:47:44,800 | INFO     | chi2: 0.0012605073950866443
[2026-03-23 12:48:30] 2026-03-23 16:47:44,800 | INFO     | current chi2=0.0012605073950866443 (change=31.75441036536836 %)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,800 | INFO     | sum of square deviations: 8456158550.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,802 | INFO     | sum of deviations: 20882685405.000008
[2026-03-23 12:48:30] 2026-03-23 16:47:44,802 | INFO     | mean x: 1774275263.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,802 | INFO     | mean y: 2584498.757475083
[2026-03-23 12:48:30] 2026-03-23 16:47:44,803 | INFO     | intersect: -4379030618.795241
[2026-03-23 12:48:30] 2026-03-23 16:47:44,803 | INFO     | chi2: 0.0010345401879140778
[2026-03-23 12:48:30] 2026-03-23 16:47:44,803 | INFO     | current chi2=0.0010345401879140778 (change=17.92668635292172 %)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,803 | INFO     | left removable region: 60
[2026-03-23 12:48:30] 2026-03-23 16:47:44,803 | INFO     | sum of square deviations: 5770452380.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,805 | INFO     | sum of deviations: 12601926255.000015
[2026-03-23 12:48:30] 2026-03-23 16:47:44,805 | INFO     | mean x: 1774275995.0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,805 | INFO     | mean y: 2587319.1396226417
[2026-03-23 12:48:30] 2026-03-23 16:47:44,806 | INFO     | intersect: -3872203385.745594
[2026-03-23 12:48:30] 2026-03-23 16:47:44,806 | INFO     | chi2: 0.0005611667470603639
[2026-03-23 12:48:30] 2026-03-23 16:47:44,806 | INFO     | current memory leak: 2.18 B/s (using 265 data points, chi2=0.00)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,806 | INFO     | could have reported an average CPU frequency of 1912 MHz (15 samples)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,807 | INFO     | ..............................
[2026-03-23 12:48:30] 2026-03-23 16:47:44,807 | INFO     | . Timing measurements:
[2026-03-23 12:48:30] 2026-03-23 16:47:44,807 | INFO     | . get job = 0 s
[2026-03-23 12:48:30] 2026-03-23 16:47:44,807 | INFO     | . initial setup = 1 s
[2026-03-23 12:48:30] 2026-03-23 16:47:44,807 | INFO     | . payload setup = 16 s
[2026-03-23 12:48:30] 2026-03-23 16:47:44,807 | INFO     | . stage-in = 0 s
[2026-03-23 12:48:30] 2026-03-23 16:47:44,807 | INFO     | . payload execution = 20176 s
[2026-03-23 12:48:30] 2026-03-23 16:47:44,807 | INFO     | . stage-out = 2 s
[2026-03-23 12:48:30] 2026-03-23 16:47:44,807 | INFO     | . log creation = 0 s
[2026-03-23 12:48:30] 2026-03-23 16:47:44,807 | INFO     | ..............................
[2026-03-23 12:48:30] 2026-03-23 16:47:44,882 | INFO     | 
[2026-03-23 12:48:30] 2026-03-23 16:47:44,883 | INFO     | job summary report
[2026-03-23 12:48:30] 2026-03-23 16:47:44,883 | INFO     | --------------------------------------------------
[2026-03-23 12:48:30] 2026-03-23 16:47:44,883 | INFO     | PanDA job id: 7062813121
[2026-03-23 12:48:30] 2026-03-23 16:47:44,883 | INFO     | task id: 49180885
[2026-03-23 12:48:30] 2026-03-23 16:47:44,883 | INFO     | errors: (none)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,884 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 12:48:30] 2026-03-23 16:47:44,884 | INFO     | pilot state: finished 
[2026-03-23 12:48:30] 2026-03-23 16:47:44,884 | INFO     | transexitcode: 0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,884 | INFO     | exeerrorcode: 0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,884 | INFO     | exeerrordiag: 
[2026-03-23 12:48:30] 2026-03-23 16:47:44,884 | INFO     | exitcode: 0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,885 | INFO     | exitmsg: OK
[2026-03-23 12:48:30] 2026-03-23 16:47:44,885 | INFO     | cpuconsumptiontime: 150256 s
[2026-03-23 12:48:30] 2026-03-23 16:47:44,885 | INFO     | nevents: 400
[2026-03-23 12:48:30] 2026-03-23 16:47:44,885 | INFO     | neventsw: 0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,885 | INFO     | pid: 21021
[2026-03-23 12:48:30] 2026-03-23 16:47:44,885 | INFO     | pgrp: 21021
[2026-03-23 12:48:30] 2026-03-23 16:47:44,885 | INFO     | corecount: 8
[2026-03-23 12:48:30] 2026-03-23 16:47:44,886 | INFO     | event service: False
[2026-03-23 12:48:30] 2026-03-23 16:47:44,886 | INFO     | sizes: {0: 2279162, 1: 2280280, 12: 2280280, 20196: 2313840, 20199: 2322838, 20201: 2322894, 20203: 2323216}
[2026-03-23 12:48:30] 2026-03-23 16:47:44,886 | INFO     | --------------------------------------------------
[2026-03-23 12:48:30] 2026-03-23 16:47:44,886 | INFO     | 
[2026-03-23 12:48:30] 2026-03-23 16:47:44,886 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-23 12:48:30] 2026-03-23 16:47:44,922 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,922 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,923 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,923 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,925 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,926 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 12:48:30] 2026-03-23 16:47:44,926 | INFO     | job 7062813121 has completed (purged errors)
[2026-03-23 12:48:30] 2026-03-23 16:47:44,926 | INFO     | overall cleanup function is called
[2026-03-23 12:48:30] 2026-03-23 16:47:45,934 | INFO     | --- collectZombieJob: --- 10, [21021]
[2026-03-23 12:48:30] 2026-03-23 16:47:45,934 | INFO     | zombie collector waiting for pid 21021
[2026-03-23 12:48:30] 2026-03-23 16:47:45,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 12:48:30] 2026-03-23 16:47:45,935 | INFO     | collected zombie processes
[2026-03-23 12:48:30] 2026-03-23 16:47:45,935 | INFO     | will attempt to kill all subprocesses of pid=21021
[2026-03-23 12:48:30] 2026-03-23 16:47:46,013 | INFO     | process IDs to be killed: [21021] (in reverse order)
[2026-03-23 12:48:30] 2026-03-23 16:47:46,075 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 12:48:30] 2026-03-23 16:47:46,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 12:48:30] 2026-03-23 16:47:46,079 | INFO     | did not find any defunct processes belonging to 21021
[2026-03-23 12:48:30] 2026-03-23 16:47:46,083 | INFO     | did not find any defunct processes belonging to 21021
[2026-03-23 12:48:30] 2026-03-23 16:47:46,083 | INFO     | ready for new job
[2026-03-23 12:48:30] 2026-03-23 16:47:46,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 12:48:30] 2026-03-23 16:47:46,086 | INFO     | **************************************
[2026-03-23 12:48:30] 2026-03-23 16:47:46,087 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 12:48:30] 2026-03-23 16:47:46,087 | INFO     | **************************************
[2026-03-23 12:48:30] 2026-03-23 16:47:46,087 | INFO     | 
[2026-03-23 12:48:30] 2026-03-23 16:47:46,087 | INFO     | architecture information:
[2026-03-23 12:48:30] 2026-03-23 16:47:46,088 | INFO     | executing command: cat /etc/os-release
[2026-03-23 12:48:30] 2026-03-23 16:47:46,107 | INFO     | cat /etc/os-release:
[2026-03-23 12:48:30] NAME="CentOS Linux"
[2026-03-23 12:48:30] VERSION="7 (Core)"
[2026-03-23 12:48:30] ID="centos"
[2026-03-23 12:48:30] ID_LIKE="rhel fedora"
[2026-03-23 12:48:30] VERSION_ID="7"
[2026-03-23 12:48:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 12:48:30] ANSI_COLOR="0;31"
[2026-03-23 12:48:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 12:48:30] HOME_URL="https://www.centos.org/"
[2026-03-23 12:48:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 12:48:30] 
[2026-03-23 12:48:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 12:48:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 12:48:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 12:48:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 12:48:30] 
[2026-03-23 12:48:30] 2026-03-23 16:47:46,107 | INFO     | **************************************
[2026-03-23 12:48:30] 2026-03-23 16:47:46,611 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-23 12:48:30] 2026-03-23 16:47:46,633 | INFO     | sufficient remaining disk space (18435014656 B)
[2026-03-23 12:48:30] 2026-03-23 16:47:46,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 12:48:30] 2026-03-23 16:47:46,634 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 12:48:30] 2026-03-23 16:47:46,634 | INFO     | update_server=False
[2026-03-23 12:48:30] 2026-03-23 16:47:46,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 12:48:30] 2026-03-23 16:47:46,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 12:48:30] 2026-03-23 16:47:46,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 12:48:30] 2026-03-23 16:47:46,932 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-23 12:48:30] 2026-03-23 16:47:46,933 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-23 12:48:30] 2026-03-23 16:47:46,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 12:48:30] 2026-03-23 16:47:46,933 | INFO     | will abort loop
[2026-03-23 12:48:30] 2026-03-23 16:47:47,287 | INFO     | all job control threads have been joined
[2026-03-23 12:48:30] 2026-03-23 16:47:47,302 | INFO     | all payload control threads have been joined
[2026-03-23 12:48:30] 2026-03-23 16:47:47,414 | INFO     | all data control threads have been joined
[2026-03-23 12:48:30] 2026-03-23 16:47:47,640 | INFO     | [job] retrieve thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:47,640 | INFO     | [job] queue monitor thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:47,664 | INFO     | [payload] failed_post thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:47,938 | INFO     | [job] job monitor thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:48,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:48,159 | INFO     | [payload] validate_post thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:48,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 12:48:30] 2026-03-23 16:47:48,288 | INFO     | [job] control thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:48,307 | INFO     | [payload] control thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:48,419 | INFO     | [data] control thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:48,641 | INFO     | [data] copytool_out thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:48,979 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:48,983 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:49,017 | INFO     | [data] copytool_in thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:49,018 | INFO     | [job] validate thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:49,049 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:47:52,239 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 12:48:30] 2026-03-23 16:48:17,218 | INFO     | PID=18482 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-23 12:48:30] 2026-03-23 16:48:17,218 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 12:48:30] 2026-03-23 16:48:17,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 12:48:30] 2026-03-23 16:48:17,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 12:48:30] 2026-03-23 16:48:23,030 | INFO     | [monitor] cgroup control has ended
[2026-03-23 12:48:30] 2026-03-23 16:48:24,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139659566696256)>', '<ExcThread(monitor, started 139658839189248)>']
[2026-03-23 12:48:30] 2026-03-23 16:48:25,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 12:48:30] 2026-03-23 16:48:25,254 | INFO     | [monitor] control thread has ended
[2026-03-23 12:48:30] 2026-03-23 16:48:29,741 | INFO     | all workflow threads have been joined
[2026-03-23 12:48:30] 2026-03-23 16:48:29,742 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 12:48:30] 2026-03-23 16:48:29,742 | INFO     | traces error code: 0
[2026-03-23 12:48:30] 2026-03-23 16:48:29,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 12:48:30] 2026-03-23 16:48:29,852 [wrapper] ==== pilot stdout END ====
[2026-03-23 12:48:30] 2026-03-23 16:48:29,857 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 12:48:30] 2026-03-23 16:48:29,862 [wrapper] pilotpid: 18482
[2026-03-23 12:48:30] 2026-03-23 16:48:29,867 [wrapper] Pilot exit status: 0
[2026-03-23 12:48:30] 2026-03-23 16:48:29,886 [wrapper] pandaids: 7062813121 7062813121
[2026-03-23 12:48:30] 2026-03-23 16:48:29,931 [wrapper] cleanup supervisor_pilot 20141 18484
[2026-03-23 12:48:30] 2026-03-23 16:48:29,936 [wrapper] Test setup, not cleaning
[2026-03-23 12:48:30] 2026-03-23 16:48:29,941 [wrapper] apfmon messages muted
[2026-03-23 12:48:30] 2026-03-23 16:48:29,945 [wrapper] ==== wrapper stdout END ====
[2026-03-23 12:48:30] 2026-03-23 16:48:29,950 [wrapper] ==== wrapper stderr END ====
[2026-03-23 12:48:30]  *** Error codes and diagnostics ***
[2026-03-23 12:48:30]     "exeErrorCode": 0,
[2026-03-23 12:48:30]     "exeErrorDiag": "",
[2026-03-23 12:48:30]     "pilotErrorCode": 0,
[2026-03-23 12:48:30]     "pilotErrorDiag": "",
[2026-03-23 12:48:30]  *** Listing of results directory ***
[2026-03-23 12:48:30] total 745488
[2026-03-23 12:48:30] drwx------ 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas    585013 Mar 22 23:30 pilot3.tar.gz
[2026-03-23 12:48:30] -rwx------ 1 boincer umatlas     36322 Mar 23 00:19 runpilot2-wrapper.sh
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas      5111 Mar 23 00:24 queuedata.json
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas       100 Mar 23 06:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 12:48:30] -rwxr-xr-x 1 boincer umatlas      7986 Mar 23 06:33 run_atlas
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas       105 Mar 23 06:33 job.xml
[2026-03-23 12:48:30] -rw-r--r-- 3 boincer umatlas 248017307 Mar 23 06:33 EVNT.49134059._000011.pool.root.1
[2026-03-23 12:48:30] -rw-r--r-- 3 boincer umatlas 248017307 Mar 23 06:33 ATLAS.root_0
[2026-03-23 12:48:30] -rw-r--r-- 2 boincer umatlas     15845 Mar 23 06:33 start_atlas.sh
[2026-03-23 12:48:30] drwxrwx--x 2 boincer umatlas      4096 Mar 23 06:33 shared
[2026-03-23 12:48:30] -rw-r--r-- 2 boincer umatlas    597549 Mar 23 06:33 input.tar.gz
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas         0 Mar 23 06:33 boinc_lockfile
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas      2613 Mar 23 07:10 pandaJob.out
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas        57 Mar 23 07:10 setup.sh.local
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas   1010858 Mar 23 07:10 agis_schedconf.cvmfs.json
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas       432 Mar 23 07:10 workernode_map.json
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas 256718142 Mar 23 12:47 HITS.49180885._000534.pool.root.1
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas       532 Mar 23 12:47 boinc_task_state.xml
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas      1057 Mar 23 12:47 memory_monitor_summary.json
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas        96 Mar 23 12:47 pilot_heartbeat.json
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas   1511579 Mar 23 12:47 agis_ddmendpoints.agis.ALL.json
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas    533015 Mar 23 12:47 log.49180885._000534.job.log.tgz.1
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas      5911 Mar 23 12:47 init_data.xml
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas      6407 Mar 23 12:47 heartbeat.json
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas      8192 Mar 23 12:47 boinc_mmap_file
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas        29 Mar 23 12:47 wrapper_checkpoint.txt
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas      4928 Mar 23 12:48 pilotlog.txt
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas   2805242 Mar 23 12:48 log.49180885._000534.job.log.1
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas       357 Mar 23 12:48 output.list
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas       620 Mar 23 12:48 runtime_log
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas   3358720 Mar 23 12:48 result.tar.gz
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas      9422 Mar 23 12:48 runtime_log.err
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas       788 Mar 23 12:48 oGNNDmyvlO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmM98LDmvFDpOo.diag
[2026-03-23 12:48:30] -rw-r--r-- 1 boincer umatlas     23119 Mar 23 12:48 stderr.txt
[2026-03-23 12:48:30] HITS file was successfully produced:
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas 256718142 Mar 23 12:47 shared/HITS.pool.root.1
[2026-03-23 12:48:30]  *** Contents of shared directory: ***
[2026-03-23 12:48:30] total 496796
[2026-03-23 12:48:30] -rw-r--r-- 3 boincer umatlas 248017307 Mar 23 06:33 ATLAS.root_0
[2026-03-23 12:48:30] -rw-r--r-- 2 boincer umatlas     15845 Mar 23 06:33 start_atlas.sh
[2026-03-23 12:48:30] -rw-r--r-- 2 boincer umatlas    597549 Mar 23 06:33 input.tar.gz
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas 256718142 Mar 23 12:47 HITS.pool.root.1
[2026-03-23 12:48:30] -rw------- 1 boincer umatlas   3358720 Mar 23 12:48 result.tar.gz
12:48:31 (14777): run_atlas exited; CPU time 150100.577933
12:48:31 (14777): called boinc_finish(0)

</stderr_txt>
]]>

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