Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:22:38 (335742): wrapper (7.7.26015): starting
00:22:38 (335742): wrapper: running run_atlas (--nthreads 8)
[2026-03-23 00:22:38] Arguments: --nthreads 8
[2026-03-23 00:22:38] Threads: 8
[2026-03-23 00:22:38] Checking for CVMFS
[2026-03-23 00:22:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 00:22:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 00:22:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 00:22:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 00:22:40] 2.13.3.0 7385 197981 418260 157601 1 593 31039889 32503808 70444 16776704 0 2353880325 99.660 2229401732 45437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-23 00:22:40] CVMFS is ok
[2026-03-23 00:22:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 00:22:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 00:22:40] Further information can be found at the LHC@home message board.
[2026-03-23 00:22:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 00:22:40] Checking for apptainer binary...
[2026-03-23 00:22:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 00:22:40] Running /usr/bin/apptainer --version
[2026-03-23 00:22:40] apptainer version 1.4.5-2.el9
[2026-03-23 00:22:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 00:22:40] c8-7-1.aglt2.org
[2026-03-23 00:22:40] apptainer works
[2026-03-23 00:22:40] Set ATHENA_PROC_NUMBER=8
[2026-03-23 00:22:40] Set ATHENA_CORE_NUMBER=8
[2026-03-23 00:22:41] Starting ATLAS job with PandaID=7057144830
[2026-03-23 00:22:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 07:43:56]  *** The last 200 lines of the pilot log: ***
[2026-03-23 07:43:56] 2026-03-23 11:43:12,897 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-23 07:43:56] 2026-03-23 11:43:12,897 | INFO     | log transfer has been attempted: DONE
[2026-03-23 07:43:56] 2026-03-23 11:43:12,897 | INFO     | job 7057144830 has finished - writing final server update
[2026-03-23 07:43:56] 2026-03-23 11:43:12,897 | INFO     | total number of processed events: 400 (read)
[2026-03-23 07:43:56] 2026-03-23 11:43:12,924 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-7057144830/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 07:43:56] 2026-03-23 11:43:12,925 | INFO     | extracted standard info from prmon json
[2026-03-23 07:43:56] 2026-03-23 11:43:12,925 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 07:43:56] 2026-03-23 11:43:12,925 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 07:43:56] 2026-03-23 11:43:12,925 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 07:43:56] 2026-03-23 11:43:12,925 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 07:43:56] 2026-03-23 11:43:12,929 | INFO     | fitting pss+swap vs Time
[2026-03-23 07:43:56] 2026-03-23 11:43:12,929 | INFO     | sum of square deviations: 24310774388.654266
[2026-03-23 07:43:56] 2026-03-23 11:43:12,932 | INFO     | sum of deviations: 189033950480.14963
[2026-03-23 07:43:56] 2026-03-23 11:43:12,932 | INFO     | mean x: 1774253124.9439251
[2026-03-23 07:43:56] 2026-03-23 11:43:12,932 | INFO     | mean y: 2497991.1728971964
[2026-03-23 07:43:56] 2026-03-23 11:43:12,932 | INFO     | intersect: -13793610351.489674
[2026-03-23 07:43:56] 2026-03-23 11:43:12,932 | INFO     | chi2: 4.4117432276454105
[2026-03-23 07:43:56] 2026-03-23 11:43:12,932 | INFO     | sum of square deviations: 23468714222.657223
[2026-03-23 07:43:56] 2026-03-23 11:43:12,935 | INFO     | sum of deviations: 213856277420.92172
[2026-03-23 07:43:56] 2026-03-23 11:43:12,935 | INFO     | mean x: 1774252972.4491725
[2026-03-23 07:43:56] 2026-03-23 11:43:12,935 | INFO     | mean y: 2502439.205673759
[2026-03-23 07:43:56] 2026-03-23 11:43:12,935 | INFO     | intersect: -16165197771.855316
[2026-03-23 07:43:56] 2026-03-23 11:43:12,935 | INFO     | chi2: 3.716491696150327
[2026-03-23 07:43:56] 2026-03-23 11:43:12,936 | INFO     | current chi2=3.716491696150327 (change=15.759111435552557 %)
[2026-03-23 07:43:56] 2026-03-23 11:43:12,936 | INFO     | right removable region: 422
[2026-03-23 07:43:56] 2026-03-23 11:43:12,936 | INFO     | sum of square deviations: 23468598322.65721
[2026-03-23 07:43:56] 2026-03-23 11:43:12,942 | INFO     | sum of deviations: 60555904583.522446
[2026-03-23 07:43:56] 2026-03-23 11:43:12,942 | INFO     | mean x: 1774253277.4491725
[2026-03-23 07:43:56] 2026-03-23 11:43:12,942 | INFO     | mean y: 2521216.3498817966
[2026-03-23 07:43:56] 2026-03-23 11:43:12,943 | INFO     | intersect: -4575575468.379992
[2026-03-23 07:43:56] 2026-03-23 11:43:12,943 | INFO     | chi2: 0.9916922368164909
[2026-03-23 07:43:56] 2026-03-23 11:43:12,943 | INFO     | current chi2=0.9916922368164909 (change=77.52153319798336 %)
[2026-03-23 07:43:56] 2026-03-23 11:43:12,943 | INFO     | sum of square deviations: 22646097044.136356
[2026-03-23 07:43:56] 2026-03-23 11:43:12,946 | INFO     | sum of deviations: 29530943416.22729
[2026-03-23 07:43:56] 2026-03-23 11:43:12,946 | INFO     | mean x: 1774253429.9545455
[2026-03-23 07:43:56] 2026-03-23 11:43:12,950 | INFO     | mean y: 2526956.538277512
[2026-03-23 07:43:56] 2026-03-23 11:43:12,950 | INFO     | intersect: -2311133430.234699
[2026-03-23 07:43:56] 2026-03-23 11:43:12,950 | INFO     | chi2: 0.8056306527108762
[2026-03-23 07:43:56] 2026-03-23 11:43:12,950 | INFO     | current chi2=0.8056306527108762 (change=18.762028903534183 %)
[2026-03-23 07:43:56] 2026-03-23 11:43:12,950 | INFO     | left removable region: 20
[2026-03-23 07:43:56] 2026-03-23 11:43:12,951 | INFO     | sum of square deviations: 20143939244.10201
[2026-03-23 07:43:56] 2026-03-23 11:43:12,953 | INFO     | sum of deviations: 29963789002.59702
[2026-03-23 07:43:56] 2026-03-23 11:43:12,953 | INFO     | mean x: 1774253551.9527364
[2026-03-23 07:43:56] 2026-03-23 11:43:12,953 | INFO     | mean y: 2536817.8208955224
[2026-03-23 07:43:56] 2026-03-23 11:43:12,953 | INFO     | intersect: -2636637100.6263576
[2026-03-23 07:43:56] 2026-03-23 11:43:12,953 | INFO     | chi2: 0.009864565998228887
[2026-03-23 07:43:56] 2026-03-23 11:43:12,953 | INFO     | current memory leak: 1.49 B/s (using 402 data points, chi2=0.01)
[2026-03-23 07:43:56] 2026-03-23 11:43:12,955 | INFO     | could have reported an average CPU frequency of 3800 MHz (18 samples)
[2026-03-23 07:43:56] 2026-03-23 11:43:12,955 | INFO     | ..............................
[2026-03-23 07:43:56] 2026-03-23 11:43:12,955 | INFO     | . Timing measurements:
[2026-03-23 07:43:56] 2026-03-23 11:43:12,955 | INFO     | . get job = 0 s
[2026-03-23 07:43:56] 2026-03-23 11:43:12,955 | INFO     | . initial setup = 39 s
[2026-03-23 07:43:56] 2026-03-23 11:43:12,955 | INFO     | . payload setup = 127 s
[2026-03-23 07:43:56] 2026-03-23 11:43:12,955 | INFO     | . stage-in = 0 s
[2026-03-23 07:43:56] 2026-03-23 11:43:12,955 | INFO     | . payload execution = 26148 s
[2026-03-23 07:43:56] 2026-03-23 11:43:12,955 | INFO     | . stage-out = 5 s
[2026-03-23 07:43:56] 2026-03-23 11:43:12,955 | INFO     | . log creation = 1 s
[2026-03-23 07:43:56] 2026-03-23 11:43:12,956 | INFO     | ..............................
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | 
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | job summary report
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | --------------------------------------------------
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | PanDA job id: 7057144830
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | task id: 49190855
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | errors: (none)
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | pilot state: finished 
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | transexitcode: 0
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | exeerrorcode: 0
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | exeerrordiag: 
[2026-03-23 07:43:56] 2026-03-23 11:43:13,303 | INFO     | exitcode: 0
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | exitmsg: OK
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | cpuconsumptiontime: 37611 s
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | nevents: 400
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | neventsw: 0
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | pid: 459294
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | pgrp: 459294
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | corecount: 8
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | event service: False
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | sizes: {0: 2279162, 1: 2279848, 2: 2280309, 13: 2280309, 26280: 2316355, 26285: 2325355, 26286: 2325733}
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | --------------------------------------------------
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | 
[2026-03-23 07:43:56] 2026-03-23 11:43:13,304 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2026-03-23 07:43:56] 2026-03-23 11:43:13,441 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,475 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 07:43:56] 2026-03-23 11:43:13,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,475 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 07:43:56] 2026-03-23 11:43:13,475 | INFO     | job 7057144830 has completed (purged errors)
[2026-03-23 07:43:56] 2026-03-23 11:43:13,475 | INFO     | overall cleanup function is called
[2026-03-23 07:43:56] 2026-03-23 11:43:14,483 | INFO     | --- collectZombieJob: --- 10, [459294]
[2026-03-23 07:43:56] 2026-03-23 11:43:14,483 | INFO     | zombie collector waiting for pid 459294
[2026-03-23 07:43:56] 2026-03-23 11:43:14,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 07:43:56] 2026-03-23 11:43:14,483 | INFO     | collected zombie processes
[2026-03-23 07:43:56] 2026-03-23 11:43:14,483 | INFO     | will attempt to kill all subprocesses of pid=459294
[2026-03-23 07:43:56] 2026-03-23 11:43:16,096 | WARNING  | process 459294 can no longer be monitored (due to stat problems) - aborting
[2026-03-23 07:43:56] 2026-03-23 11:43:19,214 | INFO     | PID=369893 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-23 07:43:56] 2026-03-23 11:43:19,215 | INFO     | .. there are 46 such processes running
[2026-03-23 07:43:56] 2026-03-23 11:43:19,233 | INFO     | using path: /tmp/boinchome/slots/12/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 07:43:56] 2026-03-23 11:43:19,299 | INFO     | process IDs to be killed: [459294] (in reverse order)
[2026-03-23 07:43:56] 2026-03-23 11:43:19,933 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 07:43:56] 2026-03-23 11:43:19,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 07:43:56] 2026-03-23 11:43:20,026 | INFO     | did not find any defunct processes belonging to 459294
[2026-03-23 07:43:56] 2026-03-23 11:43:20,092 | INFO     | did not find any defunct processes belonging to 459294
[2026-03-23 07:43:56] 2026-03-23 11:43:20,093 | INFO     | ready for new job
[2026-03-23 07:43:56] 2026-03-23 11:43:20,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 07:43:56] 2026-03-23 11:43:20,102 | INFO     | **************************************
[2026-03-23 07:43:56] 2026-03-23 11:43:20,102 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 07:43:56] 2026-03-23 11:43:20,102 | INFO     | **************************************
[2026-03-23 07:43:56] 2026-03-23 11:43:20,102 | INFO     | 
[2026-03-23 07:43:56] 2026-03-23 11:43:20,111 | INFO     | architecture information:
[2026-03-23 07:43:56] 2026-03-23 11:43:20,111 | INFO     | executing command: cat /etc/os-release
[2026-03-23 07:43:56] 2026-03-23 11:43:20,175 | INFO     | cat /etc/os-release:
[2026-03-23 07:43:56] NAME="CentOS Linux"
[2026-03-23 07:43:56] VERSION="7 (Core)"
[2026-03-23 07:43:56] ID="centos"
[2026-03-23 07:43:56] ID_LIKE="rhel fedora"
[2026-03-23 07:43:56] VERSION_ID="7"
[2026-03-23 07:43:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 07:43:56] ANSI_COLOR="0;31"
[2026-03-23 07:43:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 07:43:56] HOME_URL="https://www.centos.org/"
[2026-03-23 07:43:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 07:43:56] 
[2026-03-23 07:43:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 07:43:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 07:43:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 07:43:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 07:43:56] 
[2026-03-23 07:43:56] 2026-03-23 11:43:20,176 | INFO     | **************************************
[2026-03-23 07:43:56] 2026-03-23 11:43:20,707 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2026-03-23 07:43:56] 2026-03-23 11:43:20,783 | INFO     | sufficient remaining disk space (93361012736 B)
[2026-03-23 07:43:56] 2026-03-23 11:43:20,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 07:43:56] 2026-03-23 11:43:20,783 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 07:43:56] 2026-03-23 11:43:20,783 | INFO     | update_server=False
[2026-03-23 07:43:56] 2026-03-23 11:43:20,784 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 07:43:56] 2026-03-23 11:43:20,784 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 07:43:56] 2026-03-23 11:43:21,100 | INFO     | number of running child processes to parent process 459294: 1
[2026-03-23 07:43:56] 2026-03-23 11:43:21,100 | INFO     | maximum number of monitored processes: 6
[2026-03-23 07:43:56] 2026-03-23 11:43:21,100 | INFO     | aborting job monitoring since job object (job id=7057144830) has expired
[2026-03-23 07:43:56] 2026-03-23 11:43:21,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 07:43:56] 2026-03-23 11:43:21,101 | INFO     | will abort loop
[2026-03-23 07:43:56] 2026-03-23 11:43:21,220 | INFO     | all data control threads have been joined
[2026-03-23 07:43:56] 2026-03-23 11:43:21,788 | INFO     | all job control threads have been joined
[2026-03-23 07:43:56] 2026-03-23 11:43:21,789 | INFO     | [job] retrieve thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:21,870 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:21,897 | INFO     | all payload control threads have been joined
[2026-03-23 07:43:56] 2026-03-23 11:43:21,972 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,041 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,106 | INFO     | [job] job monitor thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,226 | INFO     | [data] control thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 07:43:56] 2026-03-23 11:43:22,793 | INFO     | [data] copytool_out thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,794 | INFO     | [job] control thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,844 | INFO     | [payload] failed_post thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,846 | INFO     | [data] copytool_in thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,871 | INFO     | [job] validate thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,871 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,877 | INFO     | [payload] validate_post thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,903 | INFO     | [payload] control thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:22,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 07:43:56] 2026-03-23 11:43:23,269 | INFO     | [job] queue monitor thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:27,007 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 07:43:56] 2026-03-23 11:43:40,199 | INFO     | [monitor] cgroup control has ended
[2026-03-23 07:43:56] 2026-03-23 11:43:41,906 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060510103360)>', '<ExcThread(monitor, started 140060024370944)>']
[2026-03-23 07:43:56] 2026-03-23 11:43:46,933 | INFO     | all workflow threads have been joined
[2026-03-23 07:43:56] 2026-03-23 11:43:46,933 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 07:43:56] 2026-03-23 11:43:46,933 | INFO     | traces error code: 0
[2026-03-23 07:43:56] 2026-03-23 11:43:46,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 07:43:56] 2026-03-23 11:43:54,290 | INFO     | PID=369893 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-23 07:43:56] 2026-03-23 11:43:54,291 | INFO     | .. there are 44 such processes running
[2026-03-23 07:43:56] 2026-03-23 11:43:54,291 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 07:43:56] 2026-03-23 11:43:54,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 07:43:56] 2026-03-23 11:43:54,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 07:43:56] 2026-03-23 11:43:54,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 07:43:56] 2026-03-23 11:43:54,291 | INFO     | [monitor] control thread has ended
[2026-03-23 07:43:56] 2026-03-23 11:43:54,440 [wrapper] ==== pilot stdout END ====
[2026-03-23 07:43:56] 2026-03-23 11:43:54,491 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 07:43:56] 2026-03-23 11:43:54,529 [wrapper] pilotpid: 369893
[2026-03-23 07:43:56] 2026-03-23 11:43:54,560 [wrapper] Pilot exit status: 0
[2026-03-23 07:43:56] 2026-03-23 11:43:55,087 [wrapper] pandaids: 7057144830
[2026-03-23 07:43:56] 2026-03-23 11:43:55,310 [wrapper] cleanup supervisor_pilot 1277925 369894
[2026-03-23 07:43:56] 2026-03-23 11:43:55,375 [wrapper] Test setup, not cleaning
[2026-03-23 07:43:56] 2026-03-23 11:43:55,414 [wrapper] apfmon messages muted
[2026-03-23 07:43:56] 2026-03-23 11:43:55,467 [wrapper] ==== wrapper stdout END ====
[2026-03-23 07:43:56] 2026-03-23 11:43:55,485 [wrapper] ==== wrapper stderr END ====
[2026-03-23 07:43:56]  *** Error codes and diagnostics ***
[2026-03-23 07:43:56]     "exeErrorCode": 0,
[2026-03-23 07:43:56]     "exeErrorDiag": "",
[2026-03-23 07:43:56]     "pilotErrorCode": 0,
[2026-03-23 07:43:56]     "pilotErrorDiag": "",
[2026-03-23 07:43:56]  *** Listing of results directory ***
[2026-03-23 07:43:56] total 476740
[2026-03-23 07:43:56] -rwx------. 1 boincer umatlas     36322 Mar 22 10:16 runpilot2-wrapper.sh
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas    585013 Mar 22 12:44 pilot3.tar.gz
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas      5111 Mar 22 12:52 queuedata.json
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas       100 Mar 23 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 07:43:56] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 23 00:22 run_atlas
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas       105 Mar 23 00:22 job.xml
[2026-03-23 07:43:56] -rw-r--r--. 2 boincer umatlas 253801051 Mar 23 00:22 EVNT.49124814._000001.pool.root.1
[2026-03-23 07:43:56] -rw-r--r--. 2 boincer umatlas     15845 Mar 23 00:22 start_atlas.sh
[2026-03-23 07:43:56] drwxrwx--x. 2 boincer umatlas      4096 Mar 23 00:22 shared
[2026-03-23 07:43:56] -rw-r--r--. 2 boincer umatlas    597535 Mar 23 00:22 input.tar.gz
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas         0 Mar 23 00:22 boinc_lockfile
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas      2578 Mar 23 00:22 pandaJob.out
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas        57 Mar 23 00:22 setup.sh.local
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas   1010663 Mar 23 00:24 agis_schedconf.cvmfs.json
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas       429 Mar 23 00:24 workernode_map.json
[2026-03-23 07:43:56] drwx------. 5 boincer umatlas      4096 Mar 23 00:24 pilot3
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas      7173 Mar 23 07:37 init_data.xml
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas 223072421 Mar 23 07:42 HITS.49190855._000008.pool.root.1
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas       530 Mar 23 07:42 boinc_task_state.xml
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas      1060 Mar 23 07:43 memory_monitor_summary.json
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas   1511579 Mar 23 07:43 agis_ddmendpoints.agis.ALL.json
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas    587251 Mar 23 07:43 log.49190855._000008.job.log.tgz.1
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas      6339 Mar 23 07:43 heartbeat.json
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas      8192 Mar 23 07:43 boinc_mmap_file
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas        28 Mar 23 07:43 wrapper_checkpoint.txt
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas       822 Mar 23 07:43 pilotlog.txt
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas        95 Mar 23 07:43 pilot_heartbeat.json
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas   3095781 Mar 23 07:43 log.49190855._000008.job.log.1
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas       357 Mar 23 07:43 output.list
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas       620 Mar 23 07:43 runtime_log
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas   3696640 Mar 23 07:43 result.tar.gz
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas      9350 Mar 23 07:43 runtime_log.err
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas       658 Mar 23 07:43 koxMDmzmYO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmiU4LDmRKSx1m.diag
[2026-03-23 07:43:56] -rw-r--r--. 1 boincer umatlas     21432 Mar 23 07:43 stderr.txt
[2026-03-23 07:43:56] HITS file was successfully produced:
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas 223072421 Mar 23 07:42 shared/HITS.pool.root.1
[2026-03-23 07:43:56]  *** Contents of shared directory: ***
[2026-03-23 07:43:56] total 469924
[2026-03-23 07:43:56] -rw-r--r--. 2 boincer umatlas 253801051 Mar 23 00:22 ATLAS.root_0
[2026-03-23 07:43:56] -rw-r--r--. 2 boincer umatlas     15845 Mar 23 00:22 start_atlas.sh
[2026-03-23 07:43:56] -rw-r--r--. 2 boincer umatlas    597535 Mar 23 00:22 input.tar.gz
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas 223072421 Mar 23 07:42 HITS.pool.root.1
[2026-03-23 07:43:56] -rw-------. 1 boincer umatlas   3696640 Mar 23 07:43 result.tar.gz
07:43:58 (335742): run_atlas exited; CPU time 38906.028006
07:43:58 (335742): called boinc_finish(0)

</stderr_txt>
]]>

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