Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:09 (3482049): wrapper (7.7.26015): starting
00:02:09 (3482049): wrapper: running run_atlas (--nthreads 8)
[2026-03-23 00:02:09] Arguments: --nthreads 8
[2026-03-23 00:02:09] Threads: 8
[2026-03-23 00:02:09] Checking for CVMFS
[2026-03-23 00:02:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 00:02:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 00:02:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 00:02:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 00:02:12] 2.13.3.0 15513 197971 842044 157599 2 256 37813565 40960001 34873 16776704 0 1503708479 99.824 695407733 30833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-23 00:02:12] CVMFS is ok
[2026-03-23 00:02:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 00:02:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 00:02:12] Further information can be found at the LHC@home message board.
[2026-03-23 00:02:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 00:02:12] Checking for apptainer binary...
[2026-03-23 00:02:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 00:02:12] Running /usr/bin/apptainer --version
[2026-03-23 00:02:12] apptainer version 1.4.5-2.el9
[2026-03-23 00:02:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 00:02:13] c-1-1.aglt2.org
[2026-03-23 00:02:13] apptainer works
[2026-03-23 00:02:13] Set ATHENA_PROC_NUMBER=8
[2026-03-23 00:02:13] Set ATHENA_CORE_NUMBER=8
[2026-03-23 00:02:13] Starting ATLAS job with PandaID=7062369531
[2026-03-23 00:02:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 06:49:30]  *** The last 200 lines of the pilot log: ***
[2026-03-24 06:49:30] 2026-03-24 10:48:43,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 06:49:30] 2026-03-24 10:48:43,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 06:49:30] 2026-03-24 10:48:43,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 06:49:30] 2026-03-24 10:48:44,266 | INFO     | fitting pss+swap vs Time
[2026-03-24 06:49:30] 2026-03-24 10:48:44,295 | INFO     | sum of square deviations: 1841754813067.339
[2026-03-24 06:49:30] 2026-03-24 10:48:44,495 | INFO     | sum of deviations: 3406475737792.777
[2026-03-24 06:49:30] 2026-03-24 10:48:44,495 | INFO     | mean x: 1774294044.1143014
[2026-03-24 06:49:30] 2026-03-24 10:48:44,495 | INFO     | mean y: 2513866.6339039207
[2026-03-24 06:49:30] 2026-03-24 10:48:44,496 | INFO     | intersect: -3279187676.9714055
[2026-03-24 06:49:30] 2026-03-24 10:48:44,502 | INFO     | chi2: 8.544948893080026
[2026-03-24 06:49:30] 2026-03-24 10:48:44,526 | INFO     | sum of square deviations: 1826542153759.7734
[2026-03-24 06:49:30] 2026-03-24 10:48:44,965 | INFO     | sum of deviations: 3512193611435.323
[2026-03-24 06:49:30] 2026-03-24 10:48:44,965 | INFO     | mean x: 1774293891.6146178
[2026-03-24 06:49:30] 2026-03-24 10:48:44,965 | INFO     | mean y: 2514923.7375415284
[2026-03-24 06:49:30] 2026-03-24 10:48:44,966 | INFO     | intersect: -3409212343.6076202
[2026-03-24 06:49:30] 2026-03-24 10:48:45,028 | INFO     | chi2: 7.827541448313798
[2026-03-24 06:49:30] 2026-03-24 10:48:45,028 | INFO     | current chi2=7.827541448313798 (change=8.395690293094761 %)
[2026-03-24 06:49:30] 2026-03-24 10:48:45,028 | INFO     | right removable region: 1805
[2026-03-24 06:49:30] 2026-03-24 10:48:45,052 | INFO     | sum of square deviations: 1826542027489.7734
[2026-03-24 06:49:30] 2026-03-24 10:48:45,400 | INFO     | monitor loop #4920: job 0:7062369531 is in state 'finished'
[2026-03-24 06:49:30] 2026-03-24 10:48:45,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-24 06:49:30] 2026-03-24 10:48:45,523 | INFO     | sum of deviations: 2778507954455.7935
[2026-03-24 06:49:30] 2026-03-24 10:48:45,545 | INFO     | mean x: 1774294196.6146178
[2026-03-24 06:49:30] 2026-03-24 10:48:45,545 | INFO     | mean y: 2520160.742524917
[2026-03-24 06:49:30] 2026-03-24 10:48:45,545 | INFO     | intersect: -2696509187.9627123
[2026-03-24 06:49:30] 2026-03-24 10:48:45,579 | INFO     | chi2: 4.352811270611207
[2026-03-24 06:49:30] 2026-03-24 10:48:45,579 | INFO     | current chi2=4.352811270611207 (change=49.05983259728735 %)
[2026-03-24 06:49:30] 2026-03-24 10:48:45,651 | INFO     | sum of square deviations: 1811413353896.4385
[2026-03-24 06:49:30] 2026-03-24 10:48:45,924 | INFO     | time since job start (110648s) is within the limit (345600.0s)
[2026-03-24 06:49:30] 2026-03-24 10:48:46,153 | INFO     | sum of deviations: 2358387706949.8857
[2026-03-24 06:49:30] 2026-03-24 10:48:46,178 | INFO     | mean x: 1774294349.1143808
[2026-03-24 06:49:30] 2026-03-24 10:48:46,178 | INFO     | mean y: 2524394.830649639
[2026-03-24 06:49:30] 2026-03-24 10:48:46,178 | INFO     | intersect: -2307535853.1304226
[2026-03-24 06:49:30] 2026-03-24 10:48:46,195 | INFO     | chi2: 2.5393885480035245
[2026-03-24 06:49:30] 2026-03-24 10:48:46,195 | INFO     | current chi2=2.5393885480035245 (change=41.660954492820174 %)
[2026-03-24 06:49:30] 2026-03-24 10:48:46,197 | INFO     | sum of square deviations: 1796368339211.3728
[2026-03-24 06:49:30] 2026-03-24 10:48:46,510 | INFO     | sum of deviations: 2125256034297.1675
[2026-03-24 06:49:30] 2026-03-24 10:48:46,510 | INFO     | mean x: 1774294501.6146994
[2026-03-24 06:49:30] 2026-03-24 10:48:46,511 | INFO     | mean y: 2526757.7589086858
[2026-03-24 06:49:30] 2026-03-24 10:48:46,526 | INFO     | intersect: -2096614055.3286593
[2026-03-24 06:49:30] 2026-03-24 10:48:46,528 | INFO     | chi2: 2.024623825689886
[2026-03-24 06:49:30] 2026-03-24 10:48:46,528 | INFO     | current chi2=2.024623825689886 (change=20.271207520343758 %)
[2026-03-24 06:49:30] 2026-03-24 10:48:46,528 | INFO     | left removable region: 30
[2026-03-24 06:49:30] 2026-03-24 10:48:46,547 | INFO     | sum of square deviations: 1734089589431.4634
[2026-03-24 06:49:30] 2026-03-24 10:48:46,998 | INFO     | sum of deviations: 1821451480144.395
[2026-03-24 06:49:30] 2026-03-24 10:48:46,998 | INFO     | mean x: 1774294776.1126761
[2026-03-24 06:49:30] 2026-03-24 10:48:46,998 | INFO     | mean y: 2532063.058028169
[2026-03-24 06:49:30] 2026-03-24 10:48:46,998 | INFO     | intersect: -1861150105.3024158
[2026-03-24 06:49:30] 2026-03-24 10:48:47,015 | INFO     | chi2: 0.7691508578744694
[2026-03-24 06:49:30] 2026-03-24 10:48:47,016 | INFO     | current memory leak: 1.05 B/s (using 1775 data points, chi2=0.77)
[2026-03-24 06:49:30] 2026-03-24 10:48:47,037 | INFO     | could have reported an average CPU frequency of 2841 MHz (64 samples)
[2026-03-24 06:49:30] 2026-03-24 10:48:47,038 | INFO     | ..............................
[2026-03-24 06:49:30] 2026-03-24 10:48:47,038 | INFO     | . Timing measurements:
[2026-03-24 06:49:30] 2026-03-24 10:48:47,038 | INFO     | . get job = 0 s
[2026-03-24 06:49:30] 2026-03-24 10:48:47,038 | INFO     | . initial setup = 51 s
[2026-03-24 06:49:30] 2026-03-24 10:48:47,038 | INFO     | . payload setup = 113 s
[2026-03-24 06:49:30] 2026-03-24 10:48:47,038 | INFO     | . stage-in = 0 s
[2026-03-24 06:49:30] 2026-03-24 10:48:47,038 | INFO     | . payload execution = 110513 s
[2026-03-24 06:49:30] 2026-03-24 10:48:47,038 | INFO     | . stage-out = 5 s
[2026-03-24 06:49:30] 2026-03-24 10:48:47,038 | INFO     | . log creation = 1 s
[2026-03-24 06:49:30] 2026-03-24 10:48:47,038 | INFO     | ..............................
[2026-03-24 06:49:30] 2026-03-24 10:48:47,963 | INFO     | 
[2026-03-24 06:49:30] 2026-03-24 10:48:47,963 | INFO     | job summary report
[2026-03-24 06:49:30] 2026-03-24 10:48:47,963 | INFO     | --------------------------------------------------
[2026-03-24 06:49:30] 2026-03-24 10:48:47,963 | INFO     | PanDA job id: 7062369531
[2026-03-24 06:49:30] 2026-03-24 10:48:47,963 | INFO     | task id: 49178033
[2026-03-24 06:49:30] 2026-03-24 10:48:47,963 | INFO     | errors: (none)
[2026-03-24 06:49:30] 2026-03-24 10:48:47,963 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 06:49:30] 2026-03-24 10:48:47,963 | INFO     | pilot state: finished 
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | transexitcode: 0
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | exeerrorcode: 0
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | exeerrordiag: 
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | exitcode: 0
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | exitmsg: OK
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | cpuconsumptiontime: 132583 s
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | nevents: 400
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | neventsw: 0
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | pid: 3556064
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | pgrp: 3556064
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | corecount: 8
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | event service: False
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | sizes: {0: 2279750, 1: 2279806, 2: 2279862, 3: 2280323, 4: 2280323, 110632: 2352815, 110638: 2361813, 110640: 2361869, 110646: 2362063}
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | --------------------------------------------------
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | 
[2026-03-24 06:49:30] 2026-03-24 10:48:47,964 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-24 06:49:30] 2026-03-24 10:48:48,013 | INFO     | time since job start (110651s) is within the limit (345600.0s)
[2026-03-24 06:49:30] 2026-03-24 10:48:48,093 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,093 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,093 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,093 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,095 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 06:49:30] 2026-03-24 10:48:48,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,095 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 06:49:30] 2026-03-24 10:48:48,095 | INFO     | job 7062369531 has completed (purged errors)
[2026-03-24 06:49:30] 2026-03-24 10:48:48,095 | INFO     | overall cleanup function is called
[2026-03-24 06:49:30] 2026-03-24 10:48:49,109 | INFO     | --- collectZombieJob: --- 10, [3556064]
[2026-03-24 06:49:30] 2026-03-24 10:48:49,109 | INFO     | zombie collector waiting for pid 3556064
[2026-03-24 06:49:30] 2026-03-24 10:48:49,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 06:49:30] 2026-03-24 10:48:49,109 | INFO     | collected zombie processes
[2026-03-24 06:49:30] 2026-03-24 10:48:49,110 | INFO     | will attempt to kill all subprocesses of pid=3556064
[2026-03-24 06:49:30] 2026-03-24 10:48:53,114 | INFO     | PID=3505577 has CPU usage=18.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-24 06:49:30] 2026-03-24 10:48:53,114 | INFO     | .. there are 63 such processes running
[2026-03-24 06:49:30] 2026-03-24 10:48:53,479 | INFO     | process IDs to be killed: [3556064] (in reverse order)
[2026-03-24 06:49:30] 2026-03-24 10:48:53,913 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 06:49:30] 2026-03-24 10:48:53,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 06:49:30] 2026-03-24 10:48:53,981 | INFO     | did not find any defunct processes belonging to 3556064
[2026-03-24 06:49:30] 2026-03-24 10:48:54,047 | INFO     | did not find any defunct processes belonging to 3556064
[2026-03-24 06:49:30] 2026-03-24 10:48:54,048 | INFO     | ready for new job
[2026-03-24 06:49:30] 2026-03-24 10:48:54,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 06:49:30] 2026-03-24 10:48:54,092 | INFO     | **************************************
[2026-03-24 06:49:30] 2026-03-24 10:48:54,093 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 06:49:30] 2026-03-24 10:48:54,093 | INFO     | **************************************
[2026-03-24 06:49:30] 2026-03-24 10:48:54,093 | INFO     | 
[2026-03-24 06:49:30] 2026-03-24 10:48:54,121 | INFO     | architecture information:
[2026-03-24 06:49:30] 2026-03-24 10:48:54,140 | INFO     | executing command: cat /etc/os-release
[2026-03-24 06:49:30] 2026-03-24 10:48:54,186 | INFO     | cat /etc/os-release:
[2026-03-24 06:49:30] NAME="CentOS Linux"
[2026-03-24 06:49:30] VERSION="7 (Core)"
[2026-03-24 06:49:30] ID="centos"
[2026-03-24 06:49:30] ID_LIKE="rhel fedora"
[2026-03-24 06:49:30] VERSION_ID="7"
[2026-03-24 06:49:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 06:49:30] ANSI_COLOR="0;31"
[2026-03-24 06:49:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 06:49:30] HOME_URL="https://www.centos.org/"
[2026-03-24 06:49:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 06:49:30] 
[2026-03-24 06:49:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 06:49:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 06:49:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 06:49:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 06:49:30] 
[2026-03-24 06:49:30] 2026-03-24 10:48:54,187 | INFO     | **************************************
[2026-03-24 06:49:30] 2026-03-24 10:48:54,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-24 06:49:30] 2026-03-24 10:48:54,767 | INFO     | sufficient remaining disk space (106397958144 B)
[2026-03-24 06:49:30] 2026-03-24 10:48:54,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 06:49:30] 2026-03-24 10:48:54,768 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 06:49:30] 2026-03-24 10:48:54,768 | INFO     | update_server=False
[2026-03-24 06:49:30] 2026-03-24 10:48:54,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 06:49:30] 2026-03-24 10:48:54,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 06:49:30] 2026-03-24 10:48:54,772 | INFO     | aborting loop
[2026-03-24 06:49:30] 2026-03-24 10:48:54,935 | INFO     | all job control threads have been joined
[2026-03-24 06:49:30] 2026-03-24 10:48:55,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 06:49:30] 2026-03-24 10:48:55,620 | INFO     | all data control threads have been joined
[2026-03-24 06:49:30] 2026-03-24 10:48:55,774 | INFO     | [job] retrieve thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:55,778 | INFO     | [job] job monitor thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:55,941 | INFO     | [job] control thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:56,090 | INFO     | [data] copytool_in thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:56,091 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:56,147 | INFO     | all payload control threads have been joined
[2026-03-24 06:49:30] 2026-03-24 10:48:56,316 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:56,382 | INFO     | [payload] failed_post thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:56,389 | INFO     | [payload] validate_post thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:56,400 | INFO     | [job] validate thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:56,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 06:49:30] 2026-03-24 10:48:56,630 | INFO     | [data] control thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:56,663 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:56,812 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 06:49:30] 2026-03-24 10:48:57,153 | INFO     | [payload] control thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:57,160 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:57,473 | INFO     | [data] copytool_out thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:48:57,552 | INFO     | [job] queue monitor thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:49:00,825 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 06:49:30] 2026-03-24 10:49:01,116 [wrapper] supervise_pilot (15 min periods counter: 124)
[2026-03-24 06:49:30] 2026-03-24 10:49:22,007 | INFO     | [monitor] cgroup control has ended
[2026-03-24 06:49:30] 2026-03-24 10:49:22,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791826573120)>', '<ExcThread(monitor, started 139791471449856)>']
[2026-03-24 06:49:30] 2026-03-24 10:49:27,245 | INFO     | all workflow threads have been joined
[2026-03-24 06:49:30] 2026-03-24 10:49:27,245 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 06:49:30] 2026-03-24 10:49:27,245 | INFO     | traces error code: 0
[2026-03-24 06:49:30] 2026-03-24 10:49:27,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 06:49:30] 2026-03-24 10:49:27,655 | INFO     | PID=3505577 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-24 06:49:30] 2026-03-24 10:49:27,656 | INFO     | .. there are 63 such processes running
[2026-03-24 06:49:30] 2026-03-24 10:49:27,660 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 06:49:30] 2026-03-24 10:49:27,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 06:49:30] 2026-03-24 10:49:27,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 06:49:30] 2026-03-24 10:49:27,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 06:49:30] 2026-03-24 10:49:27,660 | INFO     | [monitor] control thread has ended
[2026-03-24 06:49:30] 2026-03-24 10:49:28,708 [wrapper] ==== pilot stdout END ====
[2026-03-24 06:49:30] 2026-03-24 10:49:28,752 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 06:49:30] 2026-03-24 10:49:28,756 [wrapper] pilotpid: 3505577
[2026-03-24 06:49:30] 2026-03-24 10:49:28,760 [wrapper] Pilot exit status: 0
[2026-03-24 06:49:30] 2026-03-24 10:49:28,874 [wrapper] pandaids: 7062369531
[2026-03-24 06:49:30] 2026-03-24 10:49:29,985 [wrapper] cleanup supervisor_pilot   71378 3505578
[2026-03-24 06:49:30] 2026-03-24 10:49:30,041 [wrapper] Test setup, not cleaning
[2026-03-24 06:49:30] 2026-03-24 10:49:30,065 [wrapper] apfmon messages muted
[2026-03-24 06:49:30] 2026-03-24 10:49:30,085 [wrapper] ==== wrapper stdout END ====
[2026-03-24 06:49:30] 2026-03-24 10:49:30,097 [wrapper] ==== wrapper stderr END ====
[2026-03-24 06:49:30]  *** Error codes and diagnostics ***
[2026-03-24 06:49:30]     "exeErrorCode": 0,
[2026-03-24 06:49:30]     "exeErrorDiag": "",
[2026-03-24 06:49:30]     "pilotErrorCode": 0,
[2026-03-24 06:49:30]     "pilotErrorDiag": "",
[2026-03-24 06:49:30]  *** Listing of results directory ***
[2026-03-24 06:49:30] total 520260
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas    585013 Mar 22 19:05 pilot3.tar.gz
[2026-03-24 06:49:30] -rwx------. 1 boincer umatlas     36322 Mar 22 19:07 runpilot2-wrapper.sh
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas      5111 Mar 22 19:09 queuedata.json
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas       100 Mar 23 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 06:49:30] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 23 00:02 run_atlas
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas       105 Mar 23 00:02 job.xml
[2026-03-24 06:49:30] -rw-r--r--. 2 boincer umatlas 246245006 Mar 23 00:02 EVNT.49127910._000022.pool.root.1
[2026-03-24 06:49:30] -rw-r--r--. 2 boincer umatlas    597545 Mar 23 00:02 input.tar.gz
[2026-03-24 06:49:30] -rw-r--r--. 2 boincer umatlas     15845 Mar 23 00:02 start_atlas.sh
[2026-03-24 06:49:30] drwxrwx--x. 2 boincer umatlas      4096 Mar 23 00:02 shared
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas         0 Mar 23 00:02 boinc_lockfile
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas      2605 Mar 23 00:02 pandaJob.out
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas        57 Mar 23 00:02 setup.sh.local
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas   1010663 Mar 23 00:03 agis_schedconf.cvmfs.json
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas       437 Mar 23 00:04 workernode_map.json
[2026-03-24 06:49:30] drwx------. 5 boincer umatlas      4096 Mar 23 00:04 pilot3
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas 256950067 Mar 24 06:46 HITS.49178033._001237.pool.root.1
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas       531 Mar 24 06:46 boinc_task_state.xml
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas      6841 Mar 24 06:46 init_data.xml
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas      1046 Mar 24 06:48 memory_monitor_summary.json
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas   1511579 Mar 24 06:48 agis_ddmendpoints.agis.ALL.json
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas   1499968 Mar 24 06:48 log.49178033._001237.job.log.tgz.1
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas      6388 Mar 24 06:48 heartbeat.json
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas        29 Mar 24 06:49 wrapper_checkpoint.txt
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas        95 Mar 24 06:49 pilot_heartbeat.json
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas       823 Mar 24 06:49 pilotlog.txt
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas      8192 Mar 24 06:49 boinc_mmap_file
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas  11307398 Mar 24 06:49 log.49178033._001237.job.log.1
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas       357 Mar 24 06:49 output.list
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas       620 Mar 24 06:49 runtime_log
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas  12820480 Mar 24 06:49 result.tar.gz
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas      9328 Mar 24 06:49 runtime_log.err
[2026-03-24 06:49:30] -rw-------. 1 boincer umatlas       659 Mar 24 06:49 lRSNDm23gO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpZ7LDmqxbKjm.diag
[2026-03-24 06:49:30] -rw-r--r--. 1 boincer umatlas     21287 Mar 24 06:49 stderr.txt
[2026-03-24 06:49:50] HITS file was successfully produced:
[2026-03-24 06:49:50] -rw-------. 1 boincer umatlas 256950067 Mar 24 06:46 shared/HITS.pool.root.1
[2026-03-24 06:49:50]  *** Contents of shared directory: ***
[2026-03-24 06:49:50] total 504532
[2026-03-24 06:49:50] -rw-r--r--. 2 boincer umatlas 246245006 Mar 23 00:02 ATLAS.root_0
[2026-03-24 06:49:50] -rw-r--r--. 2 boincer umatlas    597545 Mar 23 00:02 input.tar.gz
[2026-03-24 06:49:50] -rw-r--r--. 2 boincer umatlas     15845 Mar 23 00:02 start_atlas.sh
[2026-03-24 06:49:50] -rw-------. 1 boincer umatlas 256950067 Mar 24 06:46 HITS.pool.root.1
[2026-03-24 06:49:50] -rw-------. 1 boincer umatlas  12820480 Mar 24 06:49 result.tar.gz
06:49:51 (3482049): run_atlas exited; CPU time 139171.315610
06:49:51 (3482049): called boinc_finish(0)

</stderr_txt>
]]>

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