Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
04:25:33 (409990): wrapper (7.7.26015): starting
04:25:33 (409990): wrapper: running run_atlas (--nthreads 4)
[2026-03-23 04:25:33] Arguments: --nthreads 4
[2026-03-23 04:25:33] Threads: 4
[2026-03-23 04:25:33] Checking for CVMFS
[2026-03-23 04:25:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 04:25:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 04:25:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 04:25:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 04:25:34] 2.13.3.0 67972 1773 55448 157607 1 49 2591406 4096001 2610 130560 0 890322 99.461 341308 1213 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-23 04:25:34] CVMFS is ok
[2026-03-23 04:25:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 04:25:34] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-23 04:25:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-23 04:25:34] Further information can be found at the LHC@home message board.
[2026-03-23 04:25:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 04:25:34] Checking for apptainer binary...
[2026-03-23 04:25:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 04:25:34] Running /usr/bin/apptainer --version
[2026-03-23 04:25:34] apptainer version 1.4.5
[2026-03-23 04:25:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 04:25:34] T3500-Ubuntu
[2026-03-23 04:25:34] apptainer works
[2026-03-23 04:25:34] Set ATHENA_PROC_NUMBER=4
[2026-03-23 04:25:34] Set ATHENA_CORE_NUMBER=4
[2026-03-23 04:25:34] Starting ATLAS job with PandaID=7062699281
[2026-03-23 04:25:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:49:28 (8419): wrapper (7.7.26015): starting
07:49:28 (8419): wrapper: running run_atlas (--nthreads 4)
[2026-03-23 07:49:28] Arguments: --nthreads 4
[2026-03-23 07:49:28] Threads: 4
[2026-03-23 07:49:28] This job has been restarted, cleaning up previous attempt
[2026-03-23 07:49:28] Checking for CVMFS
[2026-03-23 07:49:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 07:49:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 07:49:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 07:49:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 07:49:33] 2.13.3.0 8899 0 24548 157612 3 1 2611719 4096000 0 130560 0 0 0.000 1337 712 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-23 07:49:33] CVMFS is ok
[2026-03-23 07:49:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 07:49:33] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-23 07:49:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-23 07:49:33] Further information can be found at the LHC@home message board.
[2026-03-23 07:49:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 07:49:33] Checking for apptainer binary...
[2026-03-23 07:49:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 07:49:33] Running /usr/bin/apptainer --version
[2026-03-23 07:49:33] apptainer version 1.4.5
[2026-03-23 07:49:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 07:49:34] T3500-Ubuntu
[2026-03-23 07:49:34] apptainer works
[2026-03-23 07:49:34] Set ATHENA_PROC_NUMBER=4
[2026-03-23 07:49:34] Set ATHENA_CORE_NUMBER=4
[2026-03-23 07:49:34] Starting ATLAS job with PandaID=7062699281
[2026-03-23 07:49:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 13:13:42]  *** The last 200 lines of the pilot log: ***
[2026-03-23 13:13:42] 2026-03-23 17:13:09,922 | INFO     | preparing for final server update for job 7062699281 in state='finished'
[2026-03-23 13:13:42] 2026-03-23 17:13:09,923 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-7062699281/jobReport.json
[2026-03-23 13:13:42] 2026-03-23 17:13:09,925 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/8/workernode_map.json
[2026-03-23 13:13:42] 2026-03-23 17:13:09,925 | INFO     | this job has now completed (state=finished)
[2026-03-23 13:13:42] 2026-03-23 17:13:09,925 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-23 13:13:42] 2026-03-23 17:13:09,925 | INFO     | log transfer has been attempted: DONE
[2026-03-23 13:13:42] 2026-03-23 17:13:09,925 | INFO     | job 7062699281 has finished - writing final server update
[2026-03-23 13:13:42] 2026-03-23 17:13:09,925 | INFO     | total number of processed events: 400 (read)
[2026-03-23 13:13:42] 2026-03-23 17:13:09,931 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-7062699281/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 13:13:42] 2026-03-23 17:13:09,931 | INFO     | extracted standard info from prmon json
[2026-03-23 13:13:42] 2026-03-23 17:13:09,931 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 13:13:42] 2026-03-23 17:13:09,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 13:13:42] 2026-03-23 17:13:09,932 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 13:13:42] 2026-03-23 17:13:09,932 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 13:13:42] 2026-03-23 17:13:09,936 | INFO     | fitting pss+swap vs Time
[2026-03-23 13:13:42] 2026-03-23 17:13:09,937 | INFO     | sum of square deviations: 9971385099.5
[2026-03-23 13:13:42] 2026-03-23 17:13:09,939 | INFO     | sum of deviations: 75403177412.49998
[2026-03-23 13:13:42] 2026-03-23 17:13:09,939 | INFO     | mean x: 1774276282.5
[2026-03-23 13:13:42] 2026-03-23 17:13:09,939 | INFO     | mean y: 2545908.330188679
[2026-03-23 13:13:42] 2026-03-23 17:13:09,939 | INFO     | intersect: -13414453633.17252
[2026-03-23 13:13:42] 2026-03-23 17:13:09,939 | INFO     | chi2: 1.3855986755976717
[2026-03-23 13:13:42] 2026-03-23 17:13:09,940 | INFO     | sum of square deviations: 9508390372.0
[2026-03-23 13:13:42] 2026-03-23 17:13:09,942 | INFO     | sum of deviations: 74227095064.0
[2026-03-23 13:13:42] 2026-03-23 17:13:09,942 | INFO     | mean x: 1774276130.0
[2026-03-23 13:13:42] 2026-03-23 17:13:09,942 | INFO     | mean y: 2545520.926517572
[2026-03-23 13:13:42] 2026-03-23 17:13:09,942 | INFO     | intersect: -13848312281.369867
[2026-03-23 13:13:42] 2026-03-23 17:13:09,943 | INFO     | chi2: 1.3852356052904116
[2026-03-23 13:13:42] 2026-03-23 17:13:09,943 | INFO     | current chi2=1.3852356052904116 (change=0.026203136135614334 %)
[2026-03-23 13:13:42] 2026-03-23 17:13:09,943 | INFO     | right removable region: 312
[2026-03-23 13:13:42] 2026-03-23 17:13:09,943 | INFO     | sum of square deviations: 9508390372.0
[2026-03-23 13:13:42] 2026-03-23 17:13:09,946 | INFO     | sum of deviations: 28529427696.0
[2026-03-23 13:13:42] 2026-03-23 17:13:09,946 | INFO     | mean x: 1774276435.0
[2026-03-23 13:13:42] 2026-03-23 17:13:09,946 | INFO     | mean y: 2561231.214057508
[2026-03-23 13:13:42] 2026-03-23 17:13:09,946 | INFO     | intersect: -5321062356.444964
[2026-03-23 13:13:42] 2026-03-23 17:13:09,946 | INFO     | chi2: 0.04104555701127446
[2026-03-23 13:13:42] 2026-03-23 17:13:09,946 | INFO     | current chi2=0.04104555701127446 (change=97.03770234959487 %)
[2026-03-23 13:13:42] 2026-03-23 17:13:09,947 | INFO     | sum of square deviations: 9059954057.0
[2026-03-23 13:13:42] 2026-03-23 17:13:09,949 | INFO     | sum of deviations: 24113055664.500015
[2026-03-23 13:13:42] 2026-03-23 17:13:09,949 | INFO     | mean x: 1774276587.5
[2026-03-23 13:13:42] 2026-03-23 17:13:09,949 | INFO     | mean y: 2562726.1915584416
[2026-03-23 13:13:42] 2026-03-23 17:13:09,949 | INFO     | intersect: -4719672049.993756
[2026-03-23 13:13:42] 2026-03-23 17:13:09,949 | INFO     | chi2: 0.03492189343102994
[2026-03-23 13:13:42] 2026-03-23 17:13:09,949 | INFO     | current chi2=0.03492189343102994 (change=14.91918742523693 %)
[2026-03-23 13:13:42] 2026-03-23 17:13:09,950 | INFO     | left removable region: 20
[2026-03-23 13:13:42] 2026-03-23 17:13:09,950 | INFO     | sum of square deviations: 7720081493.0
[2026-03-23 13:13:42] 2026-03-23 17:13:09,952 | INFO     | sum of deviations: 19560789541.0
[2026-03-23 13:13:42] 2026-03-23 17:13:09,952 | INFO     | mean x: 1774276709.5
[2026-03-23 13:13:42] 2026-03-23 17:13:09,952 | INFO     | mean y: 2564114.664383562
[2026-03-23 13:13:42] 2026-03-23 17:13:09,952 | INFO     | intersect: -4493017095.650114
[2026-03-23 13:13:42] 2026-03-23 17:13:09,953 | INFO     | chi2: 0.03390009635688757
[2026-03-23 13:13:42] 2026-03-23 17:13:09,953 | INFO     | current memory leak: 2.53 B/s (using 292 data points, chi2=0.03)
[2026-03-23 13:13:42] 2026-03-23 17:13:09,953 | INFO     | could have reported an average CPU frequency of 3198 MHz (14 samples)
[2026-03-23 13:13:42] 2026-03-23 17:13:09,954 | INFO     | ..............................
[2026-03-23 13:13:42] 2026-03-23 17:13:09,954 | INFO     | . Timing measurements:
[2026-03-23 13:13:42] 2026-03-23 17:13:09,954 | INFO     | . get job = 0 s
[2026-03-23 13:13:42] 2026-03-23 17:13:09,954 | INFO     | . initial setup = 2 s
[2026-03-23 13:13:42] 2026-03-23 17:13:09,954 | INFO     | . payload setup = 8 s
[2026-03-23 13:13:42] 2026-03-23 17:13:09,954 | INFO     | . stage-in = 0 s
[2026-03-23 13:13:42] 2026-03-23 17:13:09,954 | INFO     | . payload execution = 19369 s
[2026-03-23 13:13:42] 2026-03-23 17:13:09,954 | INFO     | . stage-out = 2 s
[2026-03-23 13:13:42] 2026-03-23 17:13:09,954 | INFO     | . log creation = 0 s
[2026-03-23 13:13:42] 2026-03-23 17:13:09,954 | INFO     | ..............................
[2026-03-23 13:13:42] 2026-03-23 17:13:10,111 | INFO     | 
[2026-03-23 13:13:42] 2026-03-23 17:13:10,111 | INFO     | job summary report
[2026-03-23 13:13:42] 2026-03-23 17:13:10,111 | INFO     | --------------------------------------------------
[2026-03-23 13:13:42] 2026-03-23 17:13:10,111 | INFO     | PanDA job id: 7062699281
[2026-03-23 13:13:42] 2026-03-23 17:13:10,111 | INFO     | task id: 49181522
[2026-03-23 13:13:42] 2026-03-23 17:13:10,112 | INFO     | errors: (none)
[2026-03-23 13:13:42] 2026-03-23 17:13:10,112 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 13:13:42] 2026-03-23 17:13:10,112 | INFO     | pilot state: finished 
[2026-03-23 13:13:42] 2026-03-23 17:13:10,112 | INFO     | transexitcode: 0
[2026-03-23 13:13:42] 2026-03-23 17:13:10,112 | INFO     | exeerrorcode: 0
[2026-03-23 13:13:42] 2026-03-23 17:13:10,112 | INFO     | exeerrordiag: 
[2026-03-23 13:13:42] 2026-03-23 17:13:10,112 | INFO     | exitcode: 0
[2026-03-23 13:13:42] 2026-03-23 17:13:10,112 | INFO     | exitmsg: OK
[2026-03-23 13:13:42] 2026-03-23 17:13:10,112 | INFO     | cpuconsumptiontime: 76384 s
[2026-03-23 13:13:42] 2026-03-23 17:13:10,112 | INFO     | nevents: 400
[2026-03-23 13:13:42] 2026-03-23 17:13:10,113 | INFO     | neventsw: 0
[2026-03-23 13:13:42] 2026-03-23 17:13:10,113 | INFO     | pid: 34432
[2026-03-23 13:13:42] 2026-03-23 17:13:10,113 | INFO     | pgrp: 34432
[2026-03-23 13:13:42] 2026-03-23 17:13:10,113 | INFO     | corecount: 4
[2026-03-23 13:13:42] 2026-03-23 17:13:10,113 | INFO     | event service: False
[2026-03-23 13:13:42] 2026-03-23 17:13:10,113 | INFO     | sizes: {0: 2280335, 11: 2280335, 19382: 2313505, 19386: 2322587, 19388: 2322725}
[2026-03-23 13:13:42] 2026-03-23 17:13:10,113 | INFO     | --------------------------------------------------
[2026-03-23 13:13:42] 2026-03-23 17:13:10,113 | INFO     | 
[2026-03-23 13:13:42] 2026-03-23 17:13:10,113 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/8
[2026-03-23 13:13:42] 2026-03-23 17:13:10,138 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,139 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,139 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,139 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,140 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 13:13:42] 2026-03-23 17:13:10,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,140 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 13:13:42] 2026-03-23 17:13:10,141 | INFO     | job 7062699281 has completed (purged errors)
[2026-03-23 13:13:42] 2026-03-23 17:13:10,141 | INFO     | overall cleanup function is called
[2026-03-23 13:13:42] 2026-03-23 17:13:11,148 | INFO     | --- collectZombieJob: --- 10, [34432]
[2026-03-23 13:13:42] 2026-03-23 17:13:11,148 | INFO     | zombie collector waiting for pid 34432
[2026-03-23 13:13:42] 2026-03-23 17:13:11,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 13:13:42] 2026-03-23 17:13:11,148 | INFO     | collected zombie processes
[2026-03-23 13:13:42] 2026-03-23 17:13:11,148 | INFO     | will attempt to kill all subprocesses of pid=34432
[2026-03-23 13:13:42] 2026-03-23 17:13:11,336 | INFO     | process IDs to be killed: [34432] (in reverse order)
[2026-03-23 13:13:42] 2026-03-23 17:13:11,411 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 13:13:42] 2026-03-23 17:13:11,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 13:13:42] 2026-03-23 17:13:11,417 | INFO     | did not find any defunct processes belonging to 34432
[2026-03-23 13:13:42] 2026-03-23 17:13:11,423 | INFO     | did not find any defunct processes belonging to 34432
[2026-03-23 13:13:42] 2026-03-23 17:13:11,424 | INFO     | ready for new job
[2026-03-23 13:13:42] 2026-03-23 17:13:11,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 13:13:42] 2026-03-23 17:13:11,426 | INFO     | **************************************
[2026-03-23 13:13:42] 2026-03-23 17:13:11,426 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 13:13:42] 2026-03-23 17:13:11,426 | INFO     | **************************************
[2026-03-23 13:13:42] 2026-03-23 17:13:11,426 | INFO     | 
[2026-03-23 13:13:42] 2026-03-23 17:13:11,428 | INFO     | architecture information:
[2026-03-23 13:13:42] 2026-03-23 17:13:11,428 | INFO     | executing command: cat /etc/os-release
[2026-03-23 13:13:42] 2026-03-23 17:13:11,445 | INFO     | cat /etc/os-release:
[2026-03-23 13:13:42] NAME="CentOS Linux"
[2026-03-23 13:13:42] VERSION="7 (Core)"
[2026-03-23 13:13:42] ID="centos"
[2026-03-23 13:13:42] ID_LIKE="rhel fedora"
[2026-03-23 13:13:42] VERSION_ID="7"
[2026-03-23 13:13:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 13:13:42] ANSI_COLOR="0;31"
[2026-03-23 13:13:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 13:13:42] HOME_URL="https://www.centos.org/"
[2026-03-23 13:13:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 13:13:42] 
[2026-03-23 13:13:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 13:13:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 13:13:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 13:13:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 13:13:42] 
[2026-03-23 13:13:42] 2026-03-23 17:13:11,445 | INFO     | **************************************
[2026-03-23 13:13:42] 2026-03-23 17:13:11,948 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/8
[2026-03-23 13:13:42] 2026-03-23 17:13:11,966 | INFO     | sufficient remaining disk space (407432593408 B)
[2026-03-23 13:13:42] 2026-03-23 17:13:11,966 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 13:13:42] 2026-03-23 17:13:11,966 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 13:13:42] 2026-03-23 17:13:11,967 | INFO     | update_server=False
[2026-03-23 13:13:42] 2026-03-23 17:13:11,967 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 13:13:42] 2026-03-23 17:13:11,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 13:13:42] 2026-03-23 17:13:11,967 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-23 13:13:42] 2026-03-23 17:13:11,968 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-23 13:13:42] 2026-03-23 17:13:11,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 13:13:42] 2026-03-23 17:13:11,968 | INFO     | will abort loop
[2026-03-23 13:13:42] 2026-03-23 17:13:12,476 | INFO     | all data control threads have been joined
[2026-03-23 13:13:42] 2026-03-23 17:13:12,601 | INFO     | all job control threads have been joined
[2026-03-23 13:13:42] 2026-03-23 17:13:12,972 | INFO     | [job] retrieve thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:12,973 | INFO     | [job] queue monitor thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:12,973 | INFO     | [job] job monitor thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:12,985 | INFO     | all payload control threads have been joined
[2026-03-23 13:13:42] 2026-03-23 17:13:13,035 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:13,203 | INFO     | [data] copytool_in thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:13,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 13:13:42] 2026-03-23 17:13:13,481 | INFO     | [data] control thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:13,549 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:13,606 | INFO     | [job] control thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:13,758 | INFO     | [payload] failed_post thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:13,990 | INFO     | [payload] control thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:13,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 13:13:42] 2026-03-23 17:13:14,133 | INFO     | [job] validate thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:14,201 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:14,244 | INFO     | [payload] validate_post thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:15,407 | INFO     | [data] copytool_out thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:17,999 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:19,017 | INFO     | [monitor] cgroup control has ended
[2026-03-23 13:13:42] 2026-03-23 17:13:22,033 | INFO     | job.realtimelogging is not enabled
[2026-03-23 13:13:42] 2026-03-23 17:13:23,038 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 13:13:42] 2026-03-23 17:13:23,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137140118214464)>', '<ExcThread(monitor, started 137139605972736)>']
[2026-03-23 13:13:42] 2026-03-23 17:13:28,976 | INFO     | all workflow threads have been joined
[2026-03-23 13:13:42] 2026-03-23 17:13:28,976 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 13:13:42] 2026-03-23 17:13:28,976 | INFO     | traces error code: 0
[2026-03-23 13:13:42] 2026-03-23 17:13:28,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 13:13:42] 2026-03-23 17:13:41,868 | INFO     | PID=24535 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-23 13:13:42] 2026-03-23 17:13:41,868 | INFO     | .. there are 4 such processes running
[2026-03-23 13:13:42] 2026-03-23 17:13:41,869 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 13:13:42] 2026-03-23 17:13:41,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 13:13:42] 2026-03-23 17:13:41,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 13:13:42] 2026-03-23 17:13:41,869 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 13:13:42] 2026-03-23 17:13:41,869 | INFO     | [monitor] control thread has ended
[2026-03-23 13:13:42] 2026-03-23 17:13:41,989 [wrapper] ==== pilot stdout END ====
[2026-03-23 13:13:42] 2026-03-23 17:13:41,992 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 13:13:42] 2026-03-23 17:13:41,994 [wrapper] pilotpid: 24535
[2026-03-23 13:13:42] 2026-03-23 17:13:41,996 [wrapper] Pilot exit status: 0
[2026-03-23 13:13:42] 2026-03-23 17:13:42,006 [wrapper] pandaids: 7062699281 7062699281
[2026-03-23 13:13:42] 2026-03-23 17:13:42,051 [wrapper] cleanup supervisor_pilot   96433 24537
[2026-03-23 13:13:42] 2026-03-23 17:13:42,054 [wrapper] Test setup, not cleaning
[2026-03-23 13:13:42] 2026-03-23 17:13:42,057 [wrapper] apfmon messages muted
[2026-03-23 13:13:42] 2026-03-23 17:13:42,059 [wrapper] ==== wrapper stdout END ====
[2026-03-23 13:13:42] 2026-03-23 17:13:42,061 [wrapper] ==== wrapper stderr END ====
[2026-03-23 13:13:42]  *** Error codes and diagnostics ***
[2026-03-23 13:13:42]     "exeErrorCode": 0,
[2026-03-23 13:13:42]     "exeErrorDiag": "",
[2026-03-23 13:13:42]     "pilotErrorCode": 0,
[2026-03-23 13:13:42]     "pilotErrorDiag": "",
[2026-03-23 13:13:42]  *** Listing of results directory ***
[2026-03-23 13:13:42] total 694312
[2026-03-23 13:13:42] drwx------ 5 whitlerd whitlerd      4096 Mar 10 12:00 pilot3
[2026-03-23 13:13:42] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 22 22:20 pilot3.tar.gz
[2026-03-23 13:13:42] -rwx------ 1 whitlerd whitlerd     36322 Mar 22 23:22 runpilot2-wrapper.sh
[2026-03-23 13:13:42] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 22 23:26 queuedata.json
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 23 04:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 13:13:42] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 23 04:25 run_atlas
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 23 04:25 job.xml
[2026-03-23 13:13:42] -rw-r--r-- 3 whitlerd whitlerd 237115802 Mar 23 04:25 EVNT.49135245._000008.pool.root.1
[2026-03-23 13:13:42] -rw-r--r-- 3 whitlerd whitlerd 237115802 Mar 23 04:25 ATLAS.root_0
[2026-03-23 13:13:42] -rw-r--r-- 2 whitlerd whitlerd    597553 Mar 23 04:25 input.tar.gz
[2026-03-23 13:13:42] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 23 04:25 start_atlas.sh
[2026-03-23 13:13:42] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 23 04:25 shared
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 23 04:25 boinc_setup_complete
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 23 04:25 boinc_lockfile
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd      2631 Mar 23 07:49 pandaJob.out
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd   1010850 Mar 23 07:49 agis_schedconf.cvmfs.json
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd       428 Mar 23 07:49 workernode_map.json
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd      9208 Mar 23 07:50 init_data.xml
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd 226356088 Mar 23 13:12 HITS.49181522._000521.pool.root.1
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar 23 13:12 boinc_task_state.xml
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd      1043 Mar 23 13:13 memory_monitor_summary.json
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd   1511579 Mar 23 13:13 agis_ddmendpoints.agis.ALL.json
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd    467704 Mar 23 13:13 log.49181522._000521.job.log.tgz.1
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd      6341 Mar 23 13:13 heartbeat.json
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 23 13:13 boinc_mmap_file
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd        29 Mar 23 13:13 wrapper_checkpoint.txt
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd        97 Mar 23 13:13 pilot_heartbeat.json
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd       820 Mar 23 13:13 pilotlog.txt
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd   2755300 Mar 23 13:13 log.49181522._000521.job.log.1
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd       357 Mar 23 13:13 output.list
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 23 13:13 runtime_log
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd   3235840 Mar 23 13:13 result.tar.gz
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd      9105 Mar 23 13:13 runtime_log.err
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd       780 Mar 23 13:13 L3nLDmO3kO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTs8LDmzRRvYm.diag
[2026-03-23 13:13:42] -rw-rw-r-- 1 whitlerd whitlerd     23533 Mar 23 13:13 stderr.txt
[2026-03-23 13:13:42] HITS file was successfully produced:
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd 226356088 Mar 23 13:12 shared/HITS.pool.root.1
[2026-03-23 13:13:42]  *** Contents of shared directory: ***
[2026-03-23 13:13:42] total 456380
[2026-03-23 13:13:42] -rw-r--r-- 3 whitlerd whitlerd 237115802 Mar 23 04:25 ATLAS.root_0
[2026-03-23 13:13:42] -rw-r--r-- 2 whitlerd whitlerd    597553 Mar 23 04:25 input.tar.gz
[2026-03-23 13:13:42] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 23 04:25 start_atlas.sh
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd 226356088 Mar 23 13:12 HITS.pool.root.1
[2026-03-23 13:13:42] -rw------- 1 whitlerd whitlerd   3235840 Mar 23 13:13 result.tar.gz
13:13:44 (8419): run_atlas exited; CPU time 76827.420121
13:13:44 (8419): called boinc_finish(0)

</stderr_txt>
]]>

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