Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:43:30 (1278157): wrapper (7.7.26015): starting
21:43:30 (1278157): wrapper: running run_atlas (--nthreads 2)
[2026-03-23 21:43:30] Arguments: --nthreads 2
[2026-03-23 21:43:30] Threads: 2
[2026-03-23 21:43:30] Checking for CVMFS
[2026-03-23 21:43:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 21:43:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 21:43:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 21:43:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 21:43:30] 2.9.2.0 1162418 1668 57200 157618 2 50 29234573 36864001 0 130560 0 455535 99.979 51546 16611 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-23 21:43:30] CVMFS is ok
[2026-03-23 21:43:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 21:43:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 21:43:30] Further information can be found at the LHC@home message board.
[2026-03-23 21:43:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 21:43:30] Checking for apptainer binary...
[2026-03-23 21:43:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 21:43:30] Running /usr/bin/apptainer --version
[2026-03-23 21:43:30] apptainer version 1.4.1-1.1
[2026-03-23 21:43:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 21:43:31] thA337
[2026-03-23 21:43:31] apptainer works
[2026-03-23 21:43:31] Set ATHENA_PROC_NUMBER=2
[2026-03-23 21:43:31] Set ATHENA_CORE_NUMBER=2
[2026-03-23 21:43:31] Starting ATLAS job with PandaID=7062704425
[2026-03-23 21:43:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 03:39:26]  *** The last 200 lines of the pilot log: ***
[2026-03-24 03:39:26] 2026-03-24 02:39:00,030 | WARNING  | process 1286597 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 03:39:26] 2026-03-24 02:39:00,051 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 03:39:26] 2026-03-24 02:39:00,077 | INFO     | number of running child processes to parent process 1286597: 1
[2026-03-24 03:39:26] 2026-03-24 02:39:00,077 | INFO     | maximum number of monitored processes: 6
[2026-03-24 03:39:26] 2026-03-24 02:39:00,077 | INFO     | aborting job monitoring since job object (job id=7062704425) has expired
[2026-03-24 03:39:26] 2026-03-24 02:39:00,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 03:39:26] 2026-03-24 02:39:00,077 | INFO     | will abort loop
[2026-03-24 03:39:26] 2026-03-24 02:39:00,236 | INFO     | all job control threads have been joined
[2026-03-24 03:39:26] 2026-03-24 02:39:00,362 | INFO     | [job] retrieve thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:00,362 | INFO     | [job] queue monitor thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:00,382 | INFO     | [payload] failed_post thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:00,437 | INFO     | all data control threads have been joined
[2026-03-24 03:39:26] 2026-03-24 02:39:00,499 | INFO     | all payload control threads have been joined
[2026-03-24 03:39:26] 2026-03-24 02:39:00,721 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:00,821 | INFO     | [job] validate thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:01,052 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:01,083 | INFO     | [job] job monitor thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:01,242 | INFO     | [job] control thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:01,272 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:01,362 | INFO     | [data] copytool_out thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:01,407 | INFO     | [data] copytool_in thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:01,443 | INFO     | [data] control thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:01,480 | INFO     | [payload] validate_post thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:01,505 | INFO     | [payload] control thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:02,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 03:39:26] 2026-03-24 02:39:06,275 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:09,471 | INFO     | job.realtimelogging is not enabled
[2026-03-24 03:39:26] 2026-03-24 02:39:10,477 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 03:39:26] 2026-03-24 02:39:19,769 | INFO     | [monitor] cgroup control has ended
[2026-03-24 03:39:26] 2026-03-24 02:39:21,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431355799360)>', '<ExcThread(monitor, started 140430557554432)>']
[2026-03-24 03:39:26] 2026-03-24 02:39:21,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 03:39:26] 2026-03-24 02:39:21,470 | INFO     | [monitor] control thread has ended
[2026-03-24 03:39:26] 2026-03-24 02:39:26,318 | INFO     | all workflow threads have been joined
[2026-03-24 03:39:26] 2026-03-24 02:39:26,319 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 03:39:26] 2026-03-24 02:39:26,319 | INFO     | traces error code: 0
[2026-03-24 03:39:26] 2026-03-24 02:39:26,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 03:39:26] 2026-03-24 02:39:26,359 [wrapper] ==== pilot stdout END ====
[2026-03-24 03:39:26] 2026-03-24 02:39:26,362 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 03:39:26] 2026-03-24 02:39:26,365 [wrapper] pilotpid: 1282187
[2026-03-24 03:39:26] 2026-03-24 02:39:26,367 [wrapper] Pilot exit status: 0
[2026-03-24 03:39:26] 2026-03-24 02:39:26,374 [wrapper] pandaids: 7062704425
[2026-03-24 03:39:26] 2026-03-24 02:39:26,387 [wrapper] cleanup supervisor_pilot 1293653 1282188
[2026-03-24 03:39:26] 2026-03-24 02:39:26,389 [wrapper] Test setup, not cleaning
[2026-03-24 03:39:26] 2026-03-24 02:39:26,392 [wrapper] apfmon messages muted
[2026-03-24 03:39:26] 2026-03-24 02:39:26,394 [wrapper] ==== wrapper stdout END ====
[2026-03-24 03:39:26] 2026-03-24 02:39:26,396 [wrapper] ==== wrapper stderr END ====
[2026-03-24 03:39:26]  *** Error codes and diagnostics ***
[2026-03-24 03:39:26]     "exeErrorCode": 0,
[2026-03-24 03:39:26]     "exeErrorDiag": "",
[2026-03-24 03:39:26]     "pilotErrorCode": 0,
[2026-03-24 03:39:26]     "pilotErrorDiag": "",
[2026-03-24 03:39:26]  *** Listing of results directory ***
[2026-03-24 03:39:26] total 486816
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc    585013 Mar 23 03:20 pilot3.tar.gz
[2026-03-24 03:39:26] -rwx------ 1 boinc boinc     36322 Mar 23 04:22 runpilot2-wrapper.sh
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc      5111 Mar 23 04:22 queuedata.json
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc       100 Mar 23 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 03:39:26] -rwxr-xr-x 1 boinc boinc      7986 Mar 23 21:43 run_atlas
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc       105 Mar 23 21:43 job.xml
[2026-03-24 03:39:26] -rw-r--r-- 2 boinc boinc 242293642 Mar 23 21:43 EVNT.49133185._000019.pool.root.1
[2026-03-24 03:39:26] -rw-r--r-- 2 boinc boinc    597552 Mar 23 21:43 input.tar.gz
[2026-03-24 03:39:26] -rw-r--r-- 2 boinc boinc     15845 Mar 23 21:43 start_atlas.sh
[2026-03-24 03:39:26] drwxrwx--x 2 boinc boinc      4096 Mar 23 21:43 shared
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc         0 Mar 23 21:43 boinc_setup_complete
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc      6205 Mar 23 21:43 init_data.xml
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc         0 Mar 23 21:43 boinc_lockfile
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc      2611 Mar 23 21:43 pandaJob.out
[2026-03-24 03:39:26] -rw------- 1 boinc boinc   1010851 Mar 23 21:43 agis_schedconf.cvmfs.json
[2026-03-24 03:39:26] -rw------- 1 boinc boinc       416 Mar 23 21:43 workernode_map.json
[2026-03-24 03:39:26] drwx------ 5 boinc boinc      4096 Mar 23 21:43 pilot3
[2026-03-24 03:39:26] -rw------- 1 boinc boinc        95 Mar 24 03:38 pilot_heartbeat.json
[2026-03-24 03:39:26] -rw------- 1 boinc boinc 245383944 Mar 24 03:38 HITS.49176247._000955.pool.root.1
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc       530 Mar 24 03:38 boinc_task_state.xml
[2026-03-24 03:39:26] -rw------- 1 boinc boinc      1017 Mar 24 03:38 memory_monitor_summary.json
[2026-03-24 03:39:26] -rw------- 1 boinc boinc   1511579 Mar 24 03:38 agis_ddmendpoints.agis.ALL.json
[2026-03-24 03:39:26] -rw------- 1 boinc boinc    465171 Mar 24 03:38 log.49176247._000955.job.log.tgz.1
[2026-03-24 03:39:26] -rw------- 1 boinc boinc      6306 Mar 24 03:38 heartbeat.json
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc      8192 Mar 24 03:39 boinc_mmap_file
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc        28 Mar 24 03:39 wrapper_checkpoint.txt
[2026-03-24 03:39:26] -rw------- 1 boinc boinc      5148 Mar 24 03:39 pilotlog.txt
[2026-03-24 03:39:26] -rw------- 1 boinc boinc   2985065 Mar 24 03:39 log.49176247._000955.job.log.1
[2026-03-24 03:39:26] -rw------- 1 boinc boinc       357 Mar 24 03:39 output.list
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc       620 Mar 24 03:39 runtime_log
[2026-03-24 03:39:26] -rw------- 1 boinc boinc   3471360 Mar 24 03:39 result.tar.gz
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc      8897 Mar 24 03:39 runtime_log.err
[2026-03-24 03:39:26] -rw------- 1 boinc boinc       661 Mar 24 03:39 pcnNDm02kO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAq8LDmu2olzn.diag
[2026-03-24 03:39:26] -rw-r--r-- 1 boinc boinc      7109 Mar 24 03:39 stderr.txt
[2026-03-24 03:39:26] HITS file was successfully produced:
[2026-03-24 03:39:26] -rw------- 1 boinc boinc 245383944 Mar 24 03:38 shared/HITS.pool.root.1
[2026-03-24 03:39:26]  *** Contents of shared directory: ***
[2026-03-24 03:39:26] total 480244
[2026-03-24 03:39:26] -rw-r--r-- 2 boinc boinc 242293642 Mar 23 21:43 ATLAS.root_0
[2026-03-24 03:39:26] -rw-r--r-- 2 boinc boinc    597552 Mar 23 21:43 input.tar.gz
[2026-03-24 03:39:26] -rw-r--r-- 2 boinc boinc     15845 Mar 23 21:43 start_atlas.sh
[2026-03-24 03:39:26] -rw------- 1 boinc boinc 245383944 Mar 24 03:38 HITS.pool.root.1
[2026-03-24 03:39:26] -rw------- 1 boinc boinc   3471360 Mar 24 03:39 result.tar.gz
03:39:27 (1278157): run_atlas exited; CPU time 41975.334543
03:39:27 (1278157): called boinc_finish(0)

</stderr_txt>
]]>

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