Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:30:07 (3055265): wrapper (7.7.26015): starting
09:30:07 (3055265): wrapper: running run_atlas (--nthreads 2)
[2026-03-23 09:30:07] Arguments: --nthreads 2
[2026-03-23 09:30:07] Threads: 2
[2026-03-23 09:30:07] Checking for CVMFS
[2026-03-23 09:30:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 09:30:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 09:30:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 09:30:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 09:30:07] 2.9.2.0 2994062 901 53860 157607 0 49 31555555 36864000 0 130560 0 228841 99.972 31566 5882 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-23 09:30:07] CVMFS is ok
[2026-03-23 09:30:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 09:30:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 09:30:07] Further information can be found at the LHC@home message board.
[2026-03-23 09:30:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 09:30:07] Checking for apptainer binary...
[2026-03-23 09:30:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 09:30:07] Running /usr/bin/apptainer --version
[2026-03-23 09:30:07] apptainer version 1.4.1-1.1
[2026-03-23 09:30:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 09:30:08] thA389
[2026-03-23 09:30:08] apptainer works
[2026-03-23 09:30:08] Set ATHENA_PROC_NUMBER=2
[2026-03-23 09:30:08] Set ATHENA_CORE_NUMBER=2
[2026-03-23 09:30:08] Starting ATLAS job with PandaID=7062518475
[2026-03-23 09:30:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 13:51:54]  *** The last 200 lines of the pilot log: ***
[2026-03-23 13:51:54] 2026-03-23 12:50:59,572 | INFO     | update_server=False
[2026-03-23 13:51:54] 2026-03-23 12:50:59,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 13:51:54] 2026-03-23 12:50:59,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 13:51:54] 2026-03-23 12:50:59,572 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 13:51:54] 2026-03-23 12:50:59,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 13:51:54] 2026-03-23 12:50:59,615 | INFO     | aborting loop
[2026-03-23 13:51:54] 2026-03-23 12:50:59,823 | INFO     | all data control threads have been joined
[2026-03-23 13:51:54] 2026-03-23 12:51:00,270 | INFO     | all payload control threads have been joined
[2026-03-23 13:51:54] 2026-03-23 12:51:00,480 | INFO     | job.realtimelogging is not enabled
[2026-03-23 13:51:54] 2026-03-23 12:51:00,578 | INFO     | [job] retrieve thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:00,621 | INFO     | [job] job monitor thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:00,829 | INFO     | [data] control thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:01,030 | INFO     | all job control threads have been joined
[2026-03-23 13:51:54] 2026-03-23 12:51:01,276 | INFO     | [payload] control thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:01,451 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:01,478 | INFO     | [payload] failed_post thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:01,486 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:01,578 | INFO     | [data] copytool_out thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:01,801 | INFO     | [job] validate thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:01,979 | INFO     | [payload] validate_post thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:01,992 | INFO     | [data] copytool_in thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:02,003 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:02,035 | INFO     | [job] control thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:02,073 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:02,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 13:51:54] 2026-03-23 12:51:03,492 | INFO     | [job] queue monitor thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:03,579 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 13:51:54] 2026-03-23 12:51:30,006 | INFO     | PID=3059292 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-23 13:51:54] 2026-03-23 12:51:30,006 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 13:51:54] 2026-03-23 12:51:30,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 13:51:54] 2026-03-23 12:51:30,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 13:51:54] 2026-03-23 12:51:48,155 | INFO     | [monitor] cgroup control has ended
[2026-03-23 13:51:54] 2026-03-23 12:51:49,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752673191744)>', '<ExcThread(monitor, started 139752011437824)>']
[2026-03-23 13:51:54] 2026-03-23 12:51:50,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 13:51:54] 2026-03-23 12:51:50,108 | INFO     | [monitor] control thread has ended
[2026-03-23 13:51:54] 2026-03-23 12:51:54,171 | INFO     | all workflow threads have been joined
[2026-03-23 13:51:54] 2026-03-23 12:51:54,172 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 13:51:54] 2026-03-23 12:51:54,172 | INFO     | traces error code: 0
[2026-03-23 13:51:54] 2026-03-23 12:51:54,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 13:51:54] 2026-03-23 12:51:54,214 [wrapper] ==== pilot stdout END ====
[2026-03-23 13:51:54] 2026-03-23 12:51:54,217 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 13:51:54] 2026-03-23 12:51:54,220 [wrapper] pilotpid: 3059292
[2026-03-23 13:51:54] 2026-03-23 12:51:54,222 [wrapper] Pilot exit status: 0
[2026-03-23 13:51:54] 2026-03-23 12:51:54,228 [wrapper] pandaids: 7062518475
[2026-03-23 13:51:54] 2026-03-23 12:51:54,241 [wrapper] cleanup supervisor_pilot 3071717 3059293
[2026-03-23 13:51:54] 2026-03-23 12:51:54,243 [wrapper] Test setup, not cleaning
[2026-03-23 13:51:54] 2026-03-23 12:51:54,245 [wrapper] apfmon messages muted
[2026-03-23 13:51:54] 2026-03-23 12:51:54,247 [wrapper] ==== wrapper stdout END ====
[2026-03-23 13:51:54] 2026-03-23 12:51:54,249 [wrapper] ==== wrapper stderr END ====
[2026-03-23 13:51:54]  *** Error codes and diagnostics ***
[2026-03-23 13:51:54]     "exeErrorCode": 0,
[2026-03-23 13:51:54]     "exeErrorDiag": "",
[2026-03-23 13:51:54]     "pilotErrorCode": 0,
[2026-03-23 13:51:54]     "pilotErrorDiag": "",
[2026-03-23 13:51:54]  *** Listing of results directory ***
[2026-03-23 13:51:54] total 497732
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc    585013 Mar 23 00:05 pilot3.tar.gz
[2026-03-23 13:51:54] -rwx------ 1 boinc boinc     36322 Mar 23 00:51 runpilot2-wrapper.sh
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc      5111 Mar 23 00:52 queuedata.json
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc       100 Mar 23 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 13:51:54] -rwxr-xr-x 1 boinc boinc      7986 Mar 23 09:30 run_atlas
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc       105 Mar 23 09:30 job.xml
[2026-03-23 13:51:54] -rw-r--r-- 2 boinc boinc 258663092 Mar 23 09:30 EVNT.49126404._000001.pool.root.1
[2026-03-23 13:51:54] -rw-r--r-- 2 boinc boinc    597536 Mar 23 09:30 input.tar.gz
[2026-03-23 13:51:54] -rw-r--r-- 2 boinc boinc     15845 Mar 23 09:30 start_atlas.sh
[2026-03-23 13:51:54] drwxrwx--x 2 boinc boinc      4096 Mar 23 09:30 shared
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc         0 Mar 23 09:30 boinc_setup_complete
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc      6205 Mar 23 09:30 init_data.xml
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc         0 Mar 23 09:30 boinc_lockfile
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc      2582 Mar 23 09:30 pandaJob.out
[2026-03-23 13:51:54] -rw------- 1 boinc boinc   1010858 Mar 23 09:30 agis_schedconf.cvmfs.json
[2026-03-23 13:51:54] -rw------- 1 boinc boinc       425 Mar 23 09:30 workernode_map.json
[2026-03-23 13:51:54] drwx------ 5 boinc boinc      4096 Mar 23 09:30 pilot3
[2026-03-23 13:51:54] -rw------- 1 boinc boinc 241902336 Mar 23 13:50 HITS.49270940._000038.pool.root.1
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc       530 Mar 23 13:50 boinc_task_state.xml
[2026-03-23 13:51:54] -rw------- 1 boinc boinc      1016 Mar 23 13:50 memory_monitor_summary.json
[2026-03-23 13:51:54] -rw------- 1 boinc boinc   1511579 Mar 23 13:50 agis_ddmendpoints.agis.ALL.json
[2026-03-23 13:51:54] -rw------- 1 boinc boinc    396573 Mar 23 13:50 log.49270940._000038.job.log.tgz.1
[2026-03-23 13:51:54] -rw------- 1 boinc boinc      6304 Mar 23 13:50 heartbeat.json
[2026-03-23 13:51:54] -rw------- 1 boinc boinc        95 Mar 23 13:51 pilot_heartbeat.json
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc        28 Mar 23 13:51 wrapper_checkpoint.txt
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc      8192 Mar 23 13:51 boinc_mmap_file
[2026-03-23 13:51:54] -rw------- 1 boinc boinc      4820 Mar 23 13:51 pilotlog.txt
[2026-03-23 13:51:54] -rw------- 1 boinc boinc   2198660 Mar 23 13:51 log.49270940._000038.job.log.1
[2026-03-23 13:51:54] -rw------- 1 boinc boinc       357 Mar 23 13:51 output.list
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc       620 Mar 23 13:51 runtime_log
[2026-03-23 13:51:54] -rw------- 1 boinc boinc   2611200 Mar 23 13:51 result.tar.gz
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc      8897 Mar 23 13:51 runtime_log.err
[2026-03-23 13:51:54] -rw------- 1 boinc boinc       660 Mar 23 13:51 WeIMDmzkhO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgl7LDmAGu7Fn.diag
[2026-03-23 13:51:54] -rw-r--r-- 1 boinc boinc      7506 Mar 23 13:51 stderr.txt
[2026-03-23 13:51:54] HITS file was successfully produced:
[2026-03-23 13:51:54] -rw------- 1 boinc boinc 241902336 Mar 23 13:50 shared/HITS.pool.root.1
[2026-03-23 13:51:54]  *** Contents of shared directory: ***
[2026-03-23 13:51:54] total 491996
[2026-03-23 13:51:54] -rw-r--r-- 2 boinc boinc 258663092 Mar 23 09:30 ATLAS.root_0
[2026-03-23 13:51:54] -rw-r--r-- 2 boinc boinc    597536 Mar 23 09:30 input.tar.gz
[2026-03-23 13:51:54] -rw-r--r-- 2 boinc boinc     15845 Mar 23 09:30 start_atlas.sh
[2026-03-23 13:51:54] -rw------- 1 boinc boinc 241902336 Mar 23 13:50 HITS.pool.root.1
[2026-03-23 13:51:54] -rw------- 1 boinc boinc   2611200 Mar 23 13:51 result.tar.gz
13:51:55 (3055265): run_atlas exited; CPU time 30677.003795
13:51:55 (3055265): called boinc_finish(0)

</stderr_txt>
]]>

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