Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:16:48 (2163824): wrapper (7.7.26015): starting
09:16:48 (2163824): wrapper: running run_atlas (--nthreads 12)
[2026-03-24 09:16:48] Arguments: --nthreads 12
[2026-03-24 09:16:48] Threads: 12
[2026-03-24 09:16:48] Checking for CVMFS
[2026-03-24 09:16:48] No cvmfs_config command found, will try listing directly
[2026-03-24 09:16:48] CVMFS is ok
[2026-03-24 09:16:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 09:16:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 09:16:48] Further information can be found at the LHC@home message board.
[2026-03-24 09:16:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 09:16:48] Checking for apptainer binary...
[2026-03-24 09:16:48] which: no apptainer in ((null))
[2026-03-24 09:16:48] apptainer is not installed, using version from CVMFS
[2026-03-24 09:16:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 09:16:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-24 09:16:48] apptainer works
[2026-03-24 09:16:48] Set ATHENA_PROC_NUMBER=12
[2026-03-24 09:16:48] Set ATHENA_CORE_NUMBER=12
[2026-03-24 09:16:48] Starting ATLAS job with PandaID=7062352656
[2026-03-24 09:16:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 10:20:35]  *** The last 200 lines of the pilot log: ***
[2026-03-24 10:20:35]  protocol_id=None
[2026-03-24 10:20:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-24 10:20:35]  replicas=None
[2026-03-24 10:20:35]  scope=mc23_13p6TeV
[2026-03-24 10:20:35]  status=None
[2026-03-24 10:20:35]  status_code=0
[2026-03-24 10:20:35]  storage_token=
[2026-03-24 10:20:35]  surl=/var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7062352656/log.49176195._000267.job.log.tgz.1
[2026-03-24 10:20:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/0f/log.49176195._000267.job.log.tgz.1
[2026-03-24 10:20:35]  workdir=None
[2026-03-24 10:20:35] ]
[2026-03-24 10:20:35] 2026-03-24 09:19:40,766 | INFO     | transferring file log.49176195._000267.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7062352656/log.49176195._000267.job.log.tgz.1 to /var/lib/
[2026-03-24 10:20:35] 2026-03-24 09:19:40,766 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7062352656/log.49176195._000267.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/1/
[2026-03-24 10:20:35] 2026-03-24 09:19:40,781 | INFO     | adding to output.list: log.49176195._000267.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/0f/log.49176195._000267.job.log.tg
[2026-03-24 10:20:35] 2026-03-24 09:19:40,782 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-24 10:20:35] 2026-03-24 09:19:40,782 | INFO     | summary of transferred files:
[2026-03-24 10:20:35] 2026-03-24 09:19:40,782 | INFO     |  -- lfn=log.49176195._000267.job.log.tgz.1, status_code=0, status=transferred
[2026-03-24 10:20:35] 2026-03-24 09:19:40,782 | INFO     | stage-out finished correctly
[2026-03-24 10:20:35] 2026-03-24 09:19:41,797 | INFO     | time since job start (3760s) is within the limit (345600.0s)
[2026-03-24 10:20:35] 2026-03-24 09:19:43,260 | WARNING  | process 2174940 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 10:20:35] 2026-03-24 09:19:43,261 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7062352656/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 10:20:35] 2026-03-24 09:19:43,673 | INFO     | number of running child processes to parent process 2174940: 1
[2026-03-24 10:20:35] 2026-03-24 09:19:43,673 | INFO     | maximum number of monitored processes: 6
[2026-03-24 10:20:35] 2026-03-24 09:19:43,802 | INFO     | time since job start (3762s) is within the limit (345600.0s)
[2026-03-24 10:20:35] 2026-03-24 09:19:44,327 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-24 10:20:35] 2026-03-24 09:19:45,469 | INFO     | job 7062352656 has state=finished
[2026-03-24 10:20:35] 2026-03-24 09:19:45,469 | INFO     | preparing for final server update for job 7062352656 in state='finished'
[2026-03-24 10:20:35] 2026-03-24 09:19:45,807 | INFO     | time since job start (3764s) is within the limit (345600.0s)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,020 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,021 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7062352656/jobReport.json
[2026-03-24 10:20:35] 2026-03-24 09:19:46,022 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/1/workernode_map.json
[2026-03-24 10:20:35] 2026-03-24 09:19:46,022 | INFO     | this job has now completed (state=finished)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,022 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,022 | INFO     | log transfer has been attempted: DONE
[2026-03-24 10:20:35] 2026-03-24 09:19:46,022 | INFO     | job 7062352656 has finished - writing final server update
[2026-03-24 10:20:35] 2026-03-24 09:19:46,023 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4155557/.job.ad'
[2026-03-24 10:20:35] 2026-03-24 09:19:46,023 | INFO     | total number of processed events: 400 (read)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,040 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7062352656/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,041 | INFO     | extracted standard info from prmon json
[2026-03-24 10:20:35] 2026-03-24 09:19:46,041 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 10:20:35] 2026-03-24 09:19:46,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 10:20:35] 2026-03-24 09:19:46,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 10:20:35] 2026-03-24 09:19:46,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 10:20:35] 2026-03-24 09:19:46,042 | INFO     | fitting pss+swap vs Time
[2026-03-24 10:20:35] 2026-03-24 09:19:46,042 | INFO     | sum of square deviations: 51573060.0
[2026-03-24 10:20:35] 2026-03-24 09:19:46,042 | INFO     | sum of deviations: -1371091632.0
[2026-03-24 10:20:35] 2026-03-24 09:19:46,042 | INFO     | mean x: 1774342195.0
[2026-03-24 10:20:35] 2026-03-24 09:19:46,042 | INFO     | mean y: 2765788.290909091
[2026-03-24 10:20:35] 2026-03-24 09:19:46,042 | INFO     | intersect: 47174404156.63695
[2026-03-24 10:20:35] 2026-03-24 09:19:46,042 | INFO     | chi2: 0.011864402723605639
[2026-03-24 10:20:35] 2026-03-24 09:19:46,042 | INFO     | current memory leak: -26.59 B/s (using 55 data points, chi2=0.01)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,042 | INFO     | could have reported an average CPU frequency of 3595 MHz (6 samples)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,043 | INFO     | ..............................
[2026-03-24 10:20:35] 2026-03-24 09:19:46,043 | INFO     | . Timing measurements:
[2026-03-24 10:20:35] 2026-03-24 09:19:46,043 | INFO     | . get job = 0 s
[2026-03-24 10:20:35] 2026-03-24 09:19:46,043 | INFO     | . initial setup = 4 s
[2026-03-24 10:20:35] 2026-03-24 09:19:46,043 | INFO     | . payload setup = 7 s
[2026-03-24 10:20:35] 2026-03-24 09:19:46,043 | INFO     | . stage-in = 0 s
[2026-03-24 10:20:35] 2026-03-24 09:19:46,043 | INFO     | . payload execution = 3737 s
[2026-03-24 10:20:35] 2026-03-24 09:19:46,043 | INFO     | . stage-out = 0 s
[2026-03-24 10:20:35] 2026-03-24 09:19:46,043 | INFO     | . log creation = 0 s
[2026-03-24 10:20:35] 2026-03-24 09:19:46,043 | INFO     | ..............................
[2026-03-24 10:20:35] 2026-03-24 09:19:46,090 | INFO     | 
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | job summary report
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | --------------------------------------------------
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | PanDA job id: 7062352656
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | task id: 49176195
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | errors: (none)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | pilot state: finished 
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | transexitcode: 0
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | exeerrorcode: 0
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | exeerrordiag: 
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | exitcode: 0
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | exitmsg: OK
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | cpuconsumptiontime: 39941 s
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | nevents: 400
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | neventsw: 0
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | pid: 2174940
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | pgrp: 2174940
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | corecount: 12
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | event service: False
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | sizes: {0: 2280263, 11: 2280263, 3748: 2306114, 3749: 2315136, 3752: 2315192, 3754: 2315386}
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | --------------------------------------------------
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | 
[2026-03-24 10:20:35] 2026-03-24 09:19:46,091 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/1
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,106 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,106 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 10:20:35] 2026-03-24 09:19:46,106 | INFO     | job 7062352656 has completed (purged errors)
[2026-03-24 10:20:35] 2026-03-24 09:19:46,106 | INFO     | overall cleanup function is called
[2026-03-24 10:20:35] 2026-03-24 09:19:47,110 | INFO     | --- collectZombieJob: --- 10, [2174940]
[2026-03-24 10:20:35] 2026-03-24 09:19:47,111 | INFO     | zombie collector waiting for pid 2174940
[2026-03-24 10:20:35] 2026-03-24 09:19:47,111 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 10:20:35] 2026-03-24 09:19:47,111 | INFO     | collected zombie processes
[2026-03-24 10:20:35] 2026-03-24 09:19:47,111 | INFO     | will attempt to kill all subprocesses of pid=2174940
[2026-03-24 10:20:35] 2026-03-24 09:19:47,472 | INFO     | process IDs to be killed: [2174940] (in reverse order)
[2026-03-24 10:20:35] 2026-03-24 09:19:47,637 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 10:20:35] 2026-03-24 09:19:47,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 10:20:35] 2026-03-24 09:19:47,663 | INFO     | did not find any defunct processes belonging to 2174940
[2026-03-24 10:20:35] 2026-03-24 09:19:47,687 | INFO     | did not find any defunct processes belonging to 2174940
[2026-03-24 10:20:35] 2026-03-24 09:19:47,687 | INFO     | ready for new job
[2026-03-24 10:20:35] 2026-03-24 09:19:47,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 10:20:35] 2026-03-24 09:19:47,688 | INFO     | **************************************
[2026-03-24 10:20:35] 2026-03-24 09:19:47,688 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 10:20:35] 2026-03-24 09:19:47,688 | INFO     | **************************************
[2026-03-24 10:20:35] 2026-03-24 09:19:47,688 | INFO     | 
[2026-03-24 10:20:35] 2026-03-24 09:19:47,693 | INFO     | architecture information:
[2026-03-24 10:20:35] 2026-03-24 09:19:47,694 | INFO     | executing command: cat /etc/os-release
[2026-03-24 10:20:35] 2026-03-24 09:19:47,709 | INFO     | cat /etc/os-release:
[2026-03-24 10:20:35] NAME="CentOS Linux"
[2026-03-24 10:20:35] VERSION="7 (Core)"
[2026-03-24 10:20:35] ID="centos"
[2026-03-24 10:20:35] ID_LIKE="rhel fedora"
[2026-03-24 10:20:35] VERSION_ID="7"
[2026-03-24 10:20:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 10:20:35] ANSI_COLOR="0;31"
[2026-03-24 10:20:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 10:20:35] HOME_URL="https://www.centos.org/"
[2026-03-24 10:20:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 10:20:35] 
[2026-03-24 10:20:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 10:20:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 10:20:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 10:20:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 10:20:35] 
[2026-03-24 10:20:35] 2026-03-24 09:19:47,709 | INFO     | **************************************
[2026-03-24 10:20:35] 2026-03-24 09:19:48,212 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/1
[2026-03-24 10:20:35] 2026-03-24 09:19:48,227 | INFO     | sufficient remaining disk space (17568890880 B)
[2026-03-24 10:20:35] 2026-03-24 09:19:48,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 10:20:35] 2026-03-24 09:19:48,227 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 10:20:35] 2026-03-24 09:19:48,227 | INFO     | update_server=False
[2026-03-24 10:20:35] 2026-03-24 09:19:48,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 10:20:35] 2026-03-24 09:19:48,598 | INFO     | all job control threads have been joined
[2026-03-24 10:20:35] 2026-03-24 09:19:48,683 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-24 10:20:35] 2026-03-24 09:19:48,684 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-24 10:20:35] 2026-03-24 09:19:48,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 10:20:35] 2026-03-24 09:19:48,684 | INFO     | will abort loop
[2026-03-24 10:20:35] 2026-03-24 09:19:48,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 10:20:35] 2026-03-24 09:19:49,203 | INFO     | all data control threads have been joined
[2026-03-24 10:20:35] 2026-03-24 09:19:49,233 | INFO     | [job] retrieve thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:49,234 | INFO     | all payload control threads have been joined
[2026-03-24 10:20:35] 2026-03-24 09:19:49,306 | INFO     | [payload] validate_post thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:49,604 | INFO     | [job] control thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:49,689 | INFO     | [job] job monitor thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:50,109 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:50,116 | INFO     | [job] validate thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:50,173 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:50,208 | INFO     | [data] control thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:50,240 | INFO     | [payload] control thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:50,298 | INFO     | [payload] failed_post thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:50,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 10:20:35] 2026-03-24 09:19:50,488 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:50,633 | INFO     | [data] copytool_in thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:50,844 | INFO     | [data] copytool_out thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:51,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 10:20:35] 2026-03-24 09:19:52,106 | INFO     | [job] queue monitor thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:54,384 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:19:59,062 | INFO     | job.realtimelogging is not enabled
[2026-03-24 10:20:35] 2026-03-24 09:20:00,068 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 10:20:35] 2026-03-24 09:20:06,609 | INFO     | [monitor] cgroup control has ended
[2026-03-24 10:20:35] 2026-03-24 09:20:07,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23113285248832)>', '<ExcThread(monitor, started 23113036457728)>']
[2026-03-24 10:20:35] 2026-03-24 09:20:12,126 | INFO     | all workflow threads have been joined
[2026-03-24 10:20:35] 2026-03-24 09:20:12,126 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 10:20:35] 2026-03-24 09:20:12,126 | INFO     | traces error code: 0
[2026-03-24 10:20:35] 2026-03-24 09:20:12,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 10:20:35] 2026-03-24 09:20:19,338 | INFO     | PID=2168364 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-24 10:20:35] 2026-03-24 09:20:19,338 | INFO     | .. there are 14 such processes running
[2026-03-24 10:20:35] 2026-03-24 09:20:19,338 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 10:20:35] 2026-03-24 09:20:19,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 10:20:35] 2026-03-24 09:20:19,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 10:20:35] 2026-03-24 09:20:19,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 10:20:35] 2026-03-24 09:20:19,338 | INFO     | [monitor] control thread has ended
[2026-03-24 10:20:35] 2026-03-24 09:20:19,452 [wrapper] ==== pilot stdout END ====
[2026-03-24 10:20:35] 2026-03-24 09:20:19,454 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 10:20:35] 2026-03-24 09:20:19,456 [wrapper] pilotpid: 2168364
[2026-03-24 10:20:35] 2026-03-24 09:20:19,457 [wrapper] Pilot exit status: 0
[2026-03-24 10:20:35] 2026-03-24 09:20:19,463 [wrapper] pandaids: 7062352656
[2026-03-24 10:20:35] 2026-03-24 09:20:19,567 [wrapper] cleanup supervisor_pilot 2390508 2168365
[2026-03-24 10:20:35] 2026-03-24 09:20:19,569 [wrapper] Test setup, not cleaning
[2026-03-24 10:20:35] 2026-03-24 09:20:19,571 [wrapper] apfmon messages muted
[2026-03-24 10:20:35] 2026-03-24 09:20:19,572 [wrapper] ==== wrapper stdout END ====
[2026-03-24 10:20:35] 2026-03-24 09:20:19,573 [wrapper] ==== wrapper stderr END ====
[2026-03-24 10:20:35]  *** Error codes and diagnostics ***
[2026-03-24 10:20:35]     "exeErrorCode": 0,
[2026-03-24 10:20:35]     "exeErrorDiag": "",
[2026-03-24 10:20:35]     "pilotErrorCode": 0,
[2026-03-24 10:20:35]     "pilotErrorDiag": "",
[2026-03-24 10:20:35]  *** Listing of results directory ***
[2026-03-24 10:20:35] total 442216
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc    585013 Mar 22 23:34 pilot3.tar.gz
[2026-03-24 10:20:35] -rwx------. 1 boinc boinc     36322 Mar 22 23:46 runpilot2-wrapper.sh
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc      5111 Mar 22 23:46 queuedata.json
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc       100 Mar 24 09:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 10:20:35] -rwxr-xr-x. 1 boinc boinc      7986 Mar 24 09:16 run_atlas
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc       105 Mar 24 09:16 job.xml
[2026-03-24 10:20:35] -rw-r--r--. 2 boinc boinc 237741937 Mar 24 09:16 EVNT.49132973._000008.pool.root.1
[2026-03-24 10:20:35] -rw-r--r--. 2 boinc boinc     15845 Mar 24 09:16 start_atlas.sh
[2026-03-24 10:20:35] drwxrwx--x. 2 boinc boinc      4096 Mar 24 09:16 shared
[2026-03-24 10:20:35] -rw-r--r--. 2 boinc boinc    597542 Mar 24 09:16 input.tar.gz
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc      6711 Mar 24 09:16 init_data.xml
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc         0 Mar 24 09:16 boinc_lockfile
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc      2612 Mar 24 09:16 pandaJob.out
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc   1010524 Mar 24 09:16 agis_schedconf.cvmfs.json
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc   1511579 Mar 24 09:16 agis_ddmendpoints.agis.ALL.json
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc       443 Mar 24 09:17 workernode_map.json
[2026-03-24 10:20:35] drwx------. 5 boinc boinc      4096 Mar 24 09:17 pilot3
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc 209254989 Mar 24 10:19 HITS.49176195._000267.pool.root.1
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc        95 Mar 24 10:19 pilot_heartbeat.json
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc       528 Mar 24 10:19 boinc_task_state.xml
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc      1028 Mar 24 10:19 memory_monitor_summary.json
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc    377658 Mar 24 10:19 log.49176195._000267.job.log.tgz.1
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc      6352 Mar 24 10:19 heartbeat.json
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc        26 Mar 24 10:20 wrapper_checkpoint.txt
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc       823 Mar 24 10:20 pilotlog.txt
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc    570451 Mar 24 10:20 log.49176195._000267.job.log.1
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc       357 Mar 24 10:20 output.list
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc       620 Mar 24 10:20 runtime_log
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc    962560 Mar 24 10:20 result.tar.gz
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc      9223 Mar 24 10:20 runtime_log.err
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc       663 Mar 24 10:20 FqOKDmBkgO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpM7LDmNfRldm.diag
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc      8192 Mar 24 10:20 boinc_mmap_file
[2026-03-24 10:20:35] -rw-r--r--. 1 boinc boinc     21674 Mar 24 10:20 stderr.txt
[2026-03-24 10:20:35] HITS file was successfully produced:
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc 209254989 Mar 24 10:19 shared/HITS.pool.root.1
[2026-03-24 10:20:35]  *** Contents of shared directory: ***
[2026-03-24 10:20:35] total 438072
[2026-03-24 10:20:35] -rw-r--r--. 2 boinc boinc 237741937 Mar 24 09:16 ATLAS.root_0
[2026-03-24 10:20:35] -rw-r--r--. 2 boinc boinc     15845 Mar 24 09:16 start_atlas.sh
[2026-03-24 10:20:35] -rw-r--r--. 2 boinc boinc    597542 Mar 24 09:16 input.tar.gz
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc 209254989 Mar 24 10:19 HITS.pool.root.1
[2026-03-24 10:20:35] -rw-------. 1 boinc boinc    962560 Mar 24 10:20 result.tar.gz
10:20:36 (2163824): run_atlas exited; CPU time 40082.753174
10:20:36 (2163824): called boinc_finish(0)

</stderr_txt>
]]>

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