Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:46 (3351012): wrapper (7.7.26015): starting
00:02:46 (3351012): wrapper: running run_atlas (--nthreads 9)
[2026-03-23 00:02:46] Arguments: --nthreads 9
[2026-03-23 00:02:46] Threads: 9
[2026-03-23 00:02:46] Checking for CVMFS
[2026-03-23 00:02:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 00:02:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 00:02:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 00:02:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 00:02:48] 2.13.3.0 2758065 66712 505748 157599 1 347 17723254 32935936 34823 16776704 0 251604113 99.644 293816853 29564 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-23 00:02:48] CVMFS is ok
[2026-03-23 00:02:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 00:02:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 00:02:48] Further information can be found at the LHC@home message board.
[2026-03-23 00:02:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 00:02:48] Checking for apptainer binary...
[2026-03-23 00:02:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 00:02:48] Running /usr/bin/apptainer --version
[2026-03-23 00:02:49] apptainer version 1.4.5-2.el9
[2026-03-23 00:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 00:02:50] c6-12-29-1.aglt2.org
[2026-03-23 00:02:50] apptainer works
[2026-03-23 00:02:50] Set ATHENA_PROC_NUMBER=9
[2026-03-23 00:02:50] Set ATHENA_CORE_NUMBER=9
[2026-03-23 00:02:50] Starting ATLAS job with PandaID=7062355686
[2026-03-23 00:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 12:19:37]  *** The last 200 lines of the pilot log: ***
[2026-03-23 12:19:37] 2026-03-23 16:18:34,801 | INFO     | job 7062355686 has finished - writing final server update
[2026-03-23 12:19:37] 2026-03-23 16:18:34,801 | INFO     | total number of processed events: 400 (read)
[2026-03-23 12:19:37] 2026-03-23 16:18:34,823 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7062355686/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 12:19:37] 2026-03-23 16:18:34,824 | INFO     | extracted standard info from prmon json
[2026-03-23 12:19:37] 2026-03-23 16:18:34,824 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 12:19:37] 2026-03-23 16:18:34,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 12:19:37] 2026-03-23 16:18:34,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 12:19:37] 2026-03-23 16:18:34,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 12:19:37] 2026-03-23 16:18:34,836 | INFO     | fitting pss+swap vs Time
[2026-03-23 12:19:37] 2026-03-23 16:18:34,842 | INFO     | sum of square deviations: 115253682872.91513
[2026-03-23 12:19:37] 2026-03-23 16:18:34,859 | INFO     | sum of deviations: 584029146800.1296
[2026-03-23 12:19:37] 2026-03-23 16:18:34,859 | INFO     | mean x: 1774260792.534075
[2026-03-23 12:19:37] 2026-03-23 16:18:34,859 | INFO     | mean y: 2542099.3824756606
[2026-03-23 12:19:37] 2026-03-23 16:18:34,859 | INFO     | intersect: -8988233648.818033
[2026-03-23 12:19:37] 2026-03-23 16:18:34,860 | INFO     | chi2: 6.057211057366534
[2026-03-23 12:19:37] 2026-03-23 16:18:34,861 | INFO     | sum of square deviations: 112865969173.97752
[2026-03-23 12:19:37] 2026-03-23 16:18:34,888 | INFO     | sum of deviations: 625280665235.5582
[2026-03-23 12:19:37] 2026-03-23 16:18:34,888 | INFO     | mean x: 1774260640.037815
[2026-03-23 12:19:37] 2026-03-23 16:18:34,889 | INFO     | mean y: 2544717.1274509802
[2026-03-23 12:19:37] 2026-03-23 16:18:34,889 | INFO     | intersect: -9826909470.201666
[2026-03-23 12:19:37] 2026-03-23 16:18:34,890 | INFO     | chi2: 5.374151472432876
[2026-03-23 12:19:37] 2026-03-23 16:18:34,890 | INFO     | current chi2=5.374151472432876 (change=11.27680013895089 %)
[2026-03-23 12:19:37] 2026-03-23 16:18:34,890 | INFO     | right removable region: 713
[2026-03-23 12:19:37] 2026-03-23 16:18:34,891 | INFO     | sum of square deviations: 112865778671.05327
[2026-03-23 12:19:37] 2026-03-23 16:18:34,936 | INFO     | sum of deviations: 336748647242.787
[2026-03-23 12:19:37] 2026-03-23 16:18:34,937 | INFO     | mean x: 1774260945.0364146
[2026-03-23 12:19:37] 2026-03-23 16:18:34,937 | INFO     | mean y: 2557884.8543417365
[2026-03-23 12:19:37] 2026-03-23 16:18:34,937 | INFO     | intersect: -5291163384.176847
[2026-03-23 12:19:37] 2026-03-23 16:18:34,938 | INFO     | chi2: 1.970222682149566
[2026-03-23 12:19:37] 2026-03-23 16:18:34,938 | INFO     | current chi2=1.970222682149566 (change=67.47310497372449 %)
[2026-03-23 12:19:37] 2026-03-23 16:18:34,962 | INFO     | sum of square deviations: 110511040962.10535
[2026-03-23 12:19:37] 2026-03-23 16:18:34,980 | INFO     | sum of deviations: 223299173576.36786
[2026-03-23 12:19:37] 2026-03-23 16:18:34,980 | INFO     | mean x: 1774261097.5401974
[2026-03-23 12:19:37] 2026-03-23 16:18:34,980 | INFO     | mean y: 2565223.513399154
[2026-03-23 12:19:37] 2026-03-23 16:18:34,988 | INFO     | intersect: -3582515808.5735297
[2026-03-23 12:19:37] 2026-03-23 16:18:34,994 | INFO     | chi2: 1.0795415779969535
[2026-03-23 12:19:37] 2026-03-23 16:18:34,994 | INFO     | current chi2=1.0795415779969535 (change=45.207128728253984 %)
[2026-03-23 12:19:37] 2026-03-23 16:18:34,995 | INFO     | sum of square deviations: 108189366747.80542
[2026-03-23 12:19:37] 2026-03-23 16:18:35,015 | INFO     | sum of deviations: 167986621366.5527
[2026-03-23 12:19:37] 2026-03-23 16:18:35,015 | INFO     | mean x: 1774261250.0411932
[2026-03-23 12:19:37] 2026-03-23 16:18:35,015 | INFO     | mean y: 2568853.5326704546
[2026-03-23 12:19:37] 2026-03-23 16:18:35,016 | INFO     | intersect: -2752342851.522321
[2026-03-23 12:19:37] 2026-03-23 16:18:35,016 | INFO     | chi2: 0.8930505975752892
[2026-03-23 12:19:37] 2026-03-23 16:18:35,017 | INFO     | current chi2=0.8930505975752892 (change=17.275016008896195 %)
[2026-03-23 12:19:37] 2026-03-23 16:18:35,017 | INFO     | left removable region: 30
[2026-03-23 12:19:37] 2026-03-23 16:18:35,022 | INFO     | sum of square deviations: 98793372101.10657
[2026-03-23 12:19:37] 2026-03-23 16:18:35,039 | INFO     | sum of deviations: 124100478680.6911
[2026-03-23 12:19:37] 2026-03-23 16:18:35,040 | INFO     | mean x: 1774261524.5490484
[2026-03-23 12:19:37] 2026-03-23 16:18:35,040 | INFO     | mean y: 2577587.7554904833
[2026-03-23 12:19:37] 2026-03-23 16:18:35,040 | INFO     | intersect: -2226182295.8116727
[2026-03-23 12:19:37] 2026-03-23 16:18:35,041 | INFO     | chi2: 0.008078989174460403
[2026-03-23 12:19:37] 2026-03-23 16:18:35,041 | INFO     | current memory leak: 1.26 B/s (using 683 data points, chi2=0.01)
[2026-03-23 12:19:37] 2026-03-23 16:18:35,047 | INFO     | could have reported an average CPU frequency of 2611 MHz (28 samples)
[2026-03-23 12:19:37] 2026-03-23 16:18:35,047 | INFO     | ..............................
[2026-03-23 12:19:37] 2026-03-23 16:18:35,047 | INFO     | . Timing measurements:
[2026-03-23 12:19:37] 2026-03-23 16:18:35,048 | INFO     | . get job = 0 s
[2026-03-23 12:19:37] 2026-03-23 16:18:35,048 | INFO     | . initial setup = 61 s
[2026-03-23 12:19:37] 2026-03-23 16:18:35,048 | INFO     | . payload setup = 140 s
[2026-03-23 12:19:37] 2026-03-23 16:18:35,048 | INFO     | . stage-in = 0 s
[2026-03-23 12:19:37] 2026-03-23 16:18:35,048 | INFO     | . payload execution = 43837 s
[2026-03-23 12:19:37] 2026-03-23 16:18:35,048 | INFO     | . stage-out = 4 s
[2026-03-23 12:19:37] 2026-03-23 16:18:35,048 | INFO     | . log creation = 0 s
[2026-03-23 12:19:37] 2026-03-23 16:18:35,048 | INFO     | ..............................
[2026-03-23 12:19:37] 2026-03-23 16:18:35,214 | INFO     | time since job start (44008s) is within the limit (345600.0s)
[2026-03-23 12:19:37] 2026-03-23 16:18:35,241 | INFO     | 
[2026-03-23 12:19:37] 2026-03-23 16:18:35,242 | INFO     | job summary report
[2026-03-23 12:19:37] 2026-03-23 16:18:35,242 | INFO     | --------------------------------------------------
[2026-03-23 12:19:37] 2026-03-23 16:18:35,242 | INFO     | PanDA job id: 7062355686
[2026-03-23 12:19:37] 2026-03-23 16:18:35,242 | INFO     | task id: 49181154
[2026-03-23 12:19:37] 2026-03-23 16:18:35,242 | INFO     | errors: (none)
[2026-03-23 12:19:37] 2026-03-23 16:18:35,242 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 12:19:37] 2026-03-23 16:18:35,242 | INFO     | pilot state: finished 
[2026-03-23 12:19:37] 2026-03-23 16:18:35,242 | INFO     | transexitcode: 0
[2026-03-23 12:19:37] 2026-03-23 16:18:35,242 | INFO     | exeerrorcode: 0
[2026-03-23 12:19:37] 2026-03-23 16:18:35,242 | INFO     | exeerrordiag: 
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | exitcode: 0
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | exitmsg: OK
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | cpuconsumptiontime: 117454 s
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | nevents: 400
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | neventsw: 0
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | pid: 3438662
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | pgrp: 3438662
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | corecount: 9
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | event service: False
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | sizes: {0: 2279757, 1: 2279841, 2: 2280302, 13: 2280302, 43982: 2324377, 43987: 2333375, 43990: 2333559, 43993: 2333753}
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | --------------------------------------------------
[2026-03-23 12:19:37] 2026-03-23 16:18:35,243 | INFO     | 
[2026-03-23 12:19:37] 2026-03-23 16:18:35,244 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-23 12:19:37] 2026-03-23 16:18:35,386 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,387 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,387 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,387 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 12:19:37] 2026-03-23 16:18:35,388 | INFO     | job 7062355686 has completed (purged errors)
[2026-03-23 12:19:37] 2026-03-23 16:18:35,389 | INFO     | overall cleanup function is called
[2026-03-23 12:19:37] 2026-03-23 16:18:36,398 | INFO     | --- collectZombieJob: --- 10, [3438662]
[2026-03-23 12:19:37] 2026-03-23 16:18:36,399 | INFO     | zombie collector waiting for pid 3438662
[2026-03-23 12:19:37] 2026-03-23 16:18:36,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 12:19:37] 2026-03-23 16:18:36,399 | INFO     | collected zombie processes
[2026-03-23 12:19:37] 2026-03-23 16:18:36,399 | INFO     | will attempt to kill all subprocesses of pid=3438662
[2026-03-23 12:19:37] 2026-03-23 16:18:38,482 | INFO     | process IDs to be killed: [3438662] (in reverse order)
[2026-03-23 12:19:37] 2026-03-23 16:18:39,193 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 12:19:37] 2026-03-23 16:18:39,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 12:19:37] 2026-03-23 16:18:39,229 | INFO     | did not find any defunct processes belonging to 3438662
[2026-03-23 12:19:37] 2026-03-23 16:18:39,271 | INFO     | did not find any defunct processes belonging to 3438662
[2026-03-23 12:19:37] 2026-03-23 16:18:39,271 | INFO     | ready for new job
[2026-03-23 12:19:37] 2026-03-23 16:18:39,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 12:19:37] 2026-03-23 16:18:39,279 | INFO     | **************************************
[2026-03-23 12:19:37] 2026-03-23 16:18:39,279 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 12:19:37] 2026-03-23 16:18:39,279 | INFO     | **************************************
[2026-03-23 12:19:37] 2026-03-23 16:18:39,279 | INFO     | 
[2026-03-23 12:19:37] 2026-03-23 16:18:39,288 | INFO     | architecture information:
[2026-03-23 12:19:37] 2026-03-23 16:18:39,289 | INFO     | executing command: cat /etc/os-release
[2026-03-23 12:19:37] 2026-03-23 16:18:39,358 | INFO     | cat /etc/os-release:
[2026-03-23 12:19:37] NAME="CentOS Linux"
[2026-03-23 12:19:37] VERSION="7 (Core)"
[2026-03-23 12:19:37] ID="centos"
[2026-03-23 12:19:37] ID_LIKE="rhel fedora"
[2026-03-23 12:19:37] VERSION_ID="7"
[2026-03-23 12:19:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 12:19:37] ANSI_COLOR="0;31"
[2026-03-23 12:19:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 12:19:37] HOME_URL="https://www.centos.org/"
[2026-03-23 12:19:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 12:19:37] 
[2026-03-23 12:19:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 12:19:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 12:19:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 12:19:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 12:19:37] 
[2026-03-23 12:19:37] 2026-03-23 16:18:39,358 | INFO     | **************************************
[2026-03-23 12:19:37] 2026-03-23 16:18:39,862 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-23 12:19:37] 2026-03-23 16:18:39,961 | INFO     | sufficient remaining disk space (92945776640 B)
[2026-03-23 12:19:37] 2026-03-23 16:18:39,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 12:19:37] 2026-03-23 16:18:39,961 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 12:19:37] 2026-03-23 16:18:39,961 | INFO     | update_server=False
[2026-03-23 12:19:37] 2026-03-23 16:18:39,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 12:19:37] 2026-03-23 16:18:40,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 12:19:37] 2026-03-23 16:18:40,145 | INFO     | all data control threads have been joined
[2026-03-23 12:19:37] 2026-03-23 16:18:40,322 | INFO     | all job control threads have been joined
[2026-03-23 12:19:37] 2026-03-23 16:18:40,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 12:19:37] 2026-03-23 16:18:40,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 12:19:37] 2026-03-23 16:18:40,648 | INFO     | aborting loop
[2026-03-23 12:19:37] 2026-03-23 16:18:40,968 | INFO     | [job] retrieve thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:41,151 | INFO     | [data] control thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:41,176 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:41,318 | INFO     | all payload control threads have been joined
[2026-03-23 12:19:37] 2026-03-23 16:18:41,328 | INFO     | [job] control thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:41,337 | INFO     | [job] queue monitor thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:41,423 | INFO     | [payload] failed_post thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:41,653 | INFO     | [job] job monitor thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:41,724 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:41,724 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:41,921 | INFO     | [payload] validate_post thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:42,033 | INFO     | [job] validate thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:42,088 | INFO     | [data] copytool_out thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:42,223 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:42,323 | INFO     | [payload] control thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:42,337 | INFO     | [data] copytool_in thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:18:42,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 12:19:37] 2026-03-23 16:18:46,735 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 12:19:37] 2026-03-23 16:19:08,582 [wrapper] supervise_pilot (15 min periods counter: 50)
[2026-03-23 12:19:37] 2026-03-23 16:19:10,507 | INFO     | PID=3374376 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-23 12:19:37] 2026-03-23 16:19:10,507 | INFO     | .. there are 36 such processes running
[2026-03-23 12:19:37] 2026-03-23 16:19:10,508 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 12:19:37] 2026-03-23 16:19:10,508 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 12:19:37] 2026-03-23 16:19:10,508 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 12:19:37] 2026-03-23 16:19:29,788 | INFO     | [monitor] cgroup control has ended
[2026-03-23 12:19:37] 2026-03-23 16:19:30,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836065642304)>', '<ExcThread(monitor, started 139835276785408)>']
[2026-03-23 12:19:37] 2026-03-23 16:19:31,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 12:19:37] 2026-03-23 16:19:31,635 | INFO     | [monitor] control thread has ended
[2026-03-23 12:19:37] 2026-03-23 16:19:36,004 | INFO     | all workflow threads have been joined
[2026-03-23 12:19:37] 2026-03-23 16:19:36,005 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 12:19:37] 2026-03-23 16:19:36,008 | INFO     | traces error code: 0
[2026-03-23 12:19:37] 2026-03-23 16:19:36,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 12:19:37] 2026-03-23 16:19:36,397 [wrapper] ==== pilot stdout END ====
[2026-03-23 12:19:37] 2026-03-23 16:19:36,424 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 12:19:37] 2026-03-23 16:19:36,442 [wrapper] pilotpid: 3374376
[2026-03-23 12:19:37] 2026-03-23 16:19:36,450 [wrapper] Pilot exit status: 0
[2026-03-23 12:19:37] 2026-03-23 16:19:36,505 [wrapper] pandaids: 7062355686
[2026-03-23 12:19:37] 2026-03-23 16:19:36,848 [wrapper] cleanup supervisor_pilot 1823175 3374377
[2026-03-23 12:19:37] 2026-03-23 16:19:36,853 [wrapper] Test setup, not cleaning
[2026-03-23 12:19:37] 2026-03-23 16:19:36,866 [wrapper] apfmon messages muted
[2026-03-23 12:19:37] 2026-03-23 16:19:36,884 [wrapper] ==== wrapper stdout END ====
[2026-03-23 12:19:37] 2026-03-23 16:19:36,891 [wrapper] ==== wrapper stderr END ====
[2026-03-23 12:19:37]  *** Error codes and diagnostics ***
[2026-03-23 12:19:37]     "exeErrorCode": 0,
[2026-03-23 12:19:37]     "exeErrorDiag": "",
[2026-03-23 12:19:37]     "pilotErrorCode": 0,
[2026-03-23 12:19:37]     "pilotErrorDiag": "",
[2026-03-23 12:19:37]  *** Listing of results directory ***
[2026-03-23 12:19:37] total 495784
[2026-03-23 12:19:37] -rwx------. 1 boincer umatlas     36322 Mar 22 18:33 runpilot2-wrapper.sh
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas    585013 Mar 22 18:34 pilot3.tar.gz
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas      5111 Mar 22 18:36 queuedata.json
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas       100 Mar 23 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 12:19:37] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 23 00:02 run_atlas
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas       105 Mar 23 00:02 job.xml
[2026-03-23 12:19:37] -rw-r--r--. 2 boincer umatlas 247318810 Mar 23 00:02 EVNT.49134557._000011.pool.root.1
[2026-03-23 12:19:37] -rw-r--r--. 2 boincer umatlas     15845 Mar 23 00:02 start_atlas.sh
[2026-03-23 12:19:37] drwxrwx--x. 2 boincer umatlas      4096 Mar 23 00:02 shared
[2026-03-23 12:19:37] -rw-r--r--. 2 boincer umatlas    597550 Mar 23 00:02 input.tar.gz
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas         0 Mar 23 00:02 boinc_lockfile
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas      2612 Mar 23 00:02 pandaJob.out
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas        57 Mar 23 00:02 setup.sh.local
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas   1010663 Mar 23 00:04 agis_schedconf.cvmfs.json
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas       443 Mar 23 00:05 workernode_map.json
[2026-03-23 12:19:37] drwx------. 5 boincer umatlas      4096 Mar 23 00:05 pilot3
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas       531 Mar 23 12:17 boinc_task_state.xml
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas 244619253 Mar 23 12:17 HITS.49181154._001155.pool.root.1
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas        95 Mar 23 12:18 pilot_heartbeat.json
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas      1045 Mar 23 12:18 memory_monitor_summary.json
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas   1511579 Mar 23 12:18 agis_ddmendpoints.agis.ALL.json
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas    823144 Mar 23 12:18 log.49181154._001155.job.log.tgz.1
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas      6398 Mar 23 12:18 heartbeat.json
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas      6880 Mar 23 12:18 init_data.xml
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas      8192 Mar 23 12:19 boinc_mmap_file
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas        29 Mar 23 12:19 wrapper_checkpoint.txt
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas      4820 Mar 23 12:19 pilotlog.txt
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas   5075444 Mar 23 12:19 log.49181154._001155.job.log.1
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas       357 Mar 23 12:19 output.list
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas       620 Mar 23 12:19 runtime_log
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas   5918720 Mar 23 12:19 result.tar.gz
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas      9352 Mar 23 12:19 runtime_log.err
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas       660 Mar 23 12:19 jiqLDmKXgO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRK7LDmw2CjJn.diag
[2026-03-23 12:19:37] -rw-r--r--. 1 boincer umatlas     21157 Mar 23 12:19 stderr.txt
[2026-03-23 12:19:37] HITS file was successfully produced:
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas 244619253 Mar 23 12:17 shared/HITS.pool.root.1
[2026-03-23 12:19:37]  *** Contents of shared directory: ***
[2026-03-23 12:19:37] total 486800
[2026-03-23 12:19:37] -rw-r--r--. 2 boincer umatlas 247318810 Mar 23 00:02 ATLAS.root_0
[2026-03-23 12:19:37] -rw-r--r--. 2 boincer umatlas     15845 Mar 23 00:02 start_atlas.sh
[2026-03-23 12:19:37] -rw-r--r--. 2 boincer umatlas    597550 Mar 23 00:02 input.tar.gz
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas 244619253 Mar 23 12:17 HITS.pool.root.1
[2026-03-23 12:19:37] -rw-------. 1 boincer umatlas   5918720 Mar 23 12:19 result.tar.gz
12:19:38 (3351012): run_atlas exited; CPU time 120103.111421
12:19:38 (3351012): called boinc_finish(0)

</stderr_txt>
]]>

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