Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-23 23:08:51 (14032): vboxwrapper version 26210
2026-03-23 23:08:51 (14032): BOINC client version: 8.2.8
2026-03-23 23:08:52 (14032): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-03-23 23:08:52 (14032): Successfully copied 'init_data.xml' to the shared directory.
2026-03-23 23:08:52 (14032): Create VM. (boinc_2880b9dc780f6e54, slot#5)
2026-03-23 23:08:53 (14032): Setting Memory Size for VM. (4800MB)
2026-03-23 23:08:53 (14032): Setting CPU Count for VM. (8)
2026-03-23 23:08:53 (14032): Setting Chipset Options for VM.
2026-03-23 23:08:54 (14032): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-23 23:08:54 (14032): Setting Boot Options for VM.
2026-03-23 23:08:55 (14032): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-23 23:08:55 (14032): Enabling VM Network Access.
2026-03-23 23:08:55 (14032): Disabling USB Support for VM.
2026-03-23 23:08:55 (14032): Disabling COM Port Support for VM.
2026-03-23 23:08:56 (14032): Disabling LPT Port Support for VM.
2026-03-23 23:08:56 (14032): Disabling Audio Support for VM.
2026-03-23 23:08:56 (14032): Disabling Clipboard Support for VM.
2026-03-23 23:08:56 (14032): Disabling Drag and Drop Support for VM.
2026-03-23 23:08:57 (14032): Adding storage controller(s) to VM.
2026-03-23 23:08:57 (14032): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-23 23:08:59 (14032): Adding VirtualBox Guest Additions to VM.
2026-03-23 23:08:59 (14032): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-23 23:09:00 (14032): forwarding host port 63110 to guest port 80
2026-03-23 23:09:00 (14032): Enabling remote desktop for VM.
2026-03-23 23:09:00 (14032): Required extension pack not installed, remote desktop not enabled.
2026-03-23 23:09:00 (14032): Enabling shared directory for VM.
2026-03-23 23:09:01 (14032): Starting VM using VBoxManage interface. (boinc_2880b9dc780f6e54, slot#5)
2026-03-23 23:09:06 (14032): Successfully started VM. (PID = '16176')
2026-03-23 23:09:06 (14032): Reporting VM Process ID to BOINC.
2026-03-23 23:09:06 (14032): Guest Log: BIOS: VirtualBox 7.1.12
2026-03-23 23:09:06 (14032): Guest Log: CPUID EDX: 0x178bfbff
2026-03-23 23:09:06 (14032): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-23 23:09:06 (14032): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-23 23:09:06 (14032): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-23 23:09:06 (14032): Detected: Web Application Enabled (http://localhost:63110)
2026-03-23 23:09:06 (14032): Preference change detected
2026-03-23 23:09:06 (14032): Setting CPU throttle for VM. (50%)
2026-03-23 23:09:06 (14032): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-23 23:09:08 (14032): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-23 23:09:08 (14032): Guest Log: BIOS: Booting from Hard Disk...
2026-03-23 23:09:11 (14032): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-23 23:09:11 (14032): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-23 23:09:11 (14032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-23 23:09:19 (14032): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-23 23:09:19 (14032): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-23 23:09:26 (14032): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-23 23:09:26 (14032): Guest Log: 00:00:00.000184 main     Log opened 2026-03-23T23:09:24.316532000Z
2026-03-23 23:09:26 (14032): Guest Log: 00:00:00.000304 main     OS Product: Linux
2026-03-23 23:09:26 (14032): Guest Log: 00:00:00.000369 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-23 23:09:26 (14032): Guest Log: 00:00:00.000397 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-23 23:09:26 (14032): Guest Log: 00:00:00.000424 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-23 23:09:26 (14032): Guest Log: 00:00:00.000424 main     Process ID: 1377
2026-03-23 23:09:26 (14032): Guest Log: 00:00:00.000425 main     Package type: LINUX_64BITS_GENERIC
2026-03-23 23:09:26 (14032): Guest Log: 00:00:00.001238 main     5.2.32 r132073 started. Verbose level = 0
2026-03-23 23:09:26 (14032): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-23 23:09:26 (14032): Guest Log: [INFO] Mounting shared directory
2026-03-23 23:09:26 (14032): Guest Log: [INFO] Checking for init_data.xml
2026-03-23 23:09:36 (14032): Guest Log: 00:00:10.003300 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 788 676 364 000ns (GuestNow=1 774 278 575 642 611 000 ns GuestLast=1 774 307 364 318 975 000 ns fSetTimeLastLoop=true )
2026-03-23 23:09:42 (14032): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-23 23:09:42 (14032): Guest Log: [INFO] Detected branch: prod
2026-03-23 23:09:42 (14032): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-23 23:09:42 (14032): Guest Log: Copying input files
2026-03-23 23:09:44 (14032): Guest Log: Copied input files into RunAtlas.
2026-03-23 23:09:44 (14032): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-23 23:09:44 (14032): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-23 23:09:44 (14032): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-23 23:09:44 (14032): Guest Log: Further information can be found at the LHC@home message board.
2026-03-23 23:09:56 (14032): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-23 23:09:56 (14032): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-23 23:09:56 (14032): Guest Log: 2.6.3.0 1658 0 32180 157612 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-23 23:09:57 (14032): Guest Log: copied the webapp to /var/www
2026-03-23 23:09:57 (14032): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-23 23:09:57 (14032): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-23 23:09:57 (14032): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-23 23:09:57 (14032): Guest Log:  *** Starting ATLAS job. (PandaID=7062564574 taskID=49277887) ***
2026-03-24 00:49:24 (14032): Status Report: Elapsed Time: '6000.000000'
2026-03-24 00:49:24 (14032): Status Report: CPU Time: '18954.093750'
2026-03-24 02:29:41 (14032): Status Report: Elapsed Time: '12000.000000'
2026-03-24 02:29:41 (14032): Status Report: CPU Time: '40746.203125'
2026-03-24 02:43:02 (14032): Guest Log:  *** Job finished ***
2026-03-24 02:43:02 (14032): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:42:40,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:42:55,256 | INFO     | [monitor] cgroup control has ended
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:42:55,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043403269952)>', '<ExcThread(monitor, started 140042802538240)>']
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:42:55,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:42:55,717 | INFO     | [monitor] control thread has ended
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,052 [wrapper] supervise_pilot (15 min periods counter: 15)
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,376 | INFO     | all workflow threads have been joined
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,376 | INFO     | end of generic workflow (traces error code: 0)
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,377 | INFO     | traces error code: 0
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,452 [wrapper] ==== pilot stdout END ====
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,457 [wrapper] ==== wrapper stdout RESUME ====
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,462 [wrapper] pilotpid: 6105
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,467 [wrapper] Pilot exit status: 0
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,648 [wrapper] pandaids: 7062564574
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,679 [wrapper] cleanup supervisor_pilot 27562 6106
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,684 [wrapper] Test setup, not cleaning
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,688 [wrapper] apfmon messages muted
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,693 [wrapper] ==== wrapper stdout END ====
2026-03-24 02:43:02 (14032): Guest Log: 2026-03-23 18:43:00,698 [wrapper] ==== wrapper stderr END ====
2026-03-24 02:43:02 (14032): Guest Log:  *** Error codes and diagnostics ***
2026-03-24 02:43:02 (14032): Guest Log:     "exeErrorCode": 0,
2026-03-24 02:43:02 (14032): Guest Log:     "exeErrorDiag": "",
2026-03-24 02:43:02 (14032): Guest Log:     "pilotErrorCode": 0,
2026-03-24 02:43:02 (14032): Guest Log:     "pilotErrorDiag": "",
2026-03-24 02:43:02 (14032): Guest Log:  *** Listing of results directory ***
2026-03-24 02:43:02 (14032): Guest Log: total 211036
2026-03-24 02:43:02 (14032): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 23 00:45 pilot3.tar.gz
2026-03-24 02:43:02 (14032): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 23 00:50 runpilot2-wrapper.sh
2026-03-24 02:43:02 (14032): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 23 00:54 queuedata.json
2026-03-24 02:43:02 (14032): Guest Log: -rwxr-xr-x. 1 atlas atlas      8561 Mar 23 15:09 init_data.xml
2026-03-24 02:43:02 (14032): Guest Log: -rwxr-xr-x. 1 atlas atlas    597541 Mar 23 15:09 input.tar.gz
2026-03-24 02:43:02 (14032): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 23 15:09 start_atlas.sh
2026-03-24 02:43:02 (14032): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 23 15:09 EVNT.49136850._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-03-24 02:43:02 (14032): Guest Log: -rw-r--r--. 1 atlas atlas      2597 Mar 23 15:09 pandaJob.out
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas   1010850 Mar 23 15:12 agis_schedconf.cvmfs.json
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas       399 Mar 23 15:12 workernode_map.json
2026-03-24 02:43:02 (14032): Guest Log: drwx------. 5 atlas atlas      4096 Mar 23 15:12 pilot3
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas 207964411 Mar 23 18:41 HITS.49277887._000029.pool.root.1
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas      1035 Mar 23 18:41 memory_monitor_summary.json
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas        95 Mar 23 18:41 pilot_heartbeat.json
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 23 18:42 agis_ddmendpoints.agis.ALL.json
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas    422783 Mar 23 18:42 log.49277887._000029.job.log.tgz.1
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas      6269 Mar 23 18:42 heartbeat.json
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas      4987 Mar 23 18:43 pilotlog.txt
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas   1708536 Mar 23 18:43 log.49277887._000029.job.log.1
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas       357 Mar 23 18:43 output.list
2026-03-24 02:43:02 (14032): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 23 18:43 runtime_log
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas   2150400 Mar 23 18:43 result.tar.gz
2026-03-24 02:43:02 (14032): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Mar 23 18:43 runtime_log.err
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas       657 Mar 23 18:43 hsEODmffiO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEF8LDm5mTbDn.diag
2026-03-24 02:43:02 (14032): Guest Log: Looking for outputfile HITS.49277887._000029.pool.root.1
2026-03-24 02:43:02 (14032): Guest Log: HITS file was successfully produced
2026-03-24 02:43:02 (14032): Guest Log: -rw-------. 1 atlas atlas 207964411 Mar 23 18:41 /home/atlas/RunAtlas/HITS.49277887._000029.pool.root.1
2026-03-24 02:43:03 (14032): Guest Log: Successfully finished the ATLAS job!
2026-03-24 02:43:03 (14032): Guest Log: Copying the results back to the shared directory!
2026-03-24 02:43:04 (14032): Guest Log:  *** Contents of shared directory: ***
2026-03-24 02:43:04 (14032): Guest Log: total 450500
2026-03-24 02:43:04 (14032): Guest Log: -rwxrwxrwx. 1 root root 250565113 Mar 23 15:08 ATLAS.root_0
2026-03-24 02:43:04 (14032): Guest Log: -rwxrwxrwx. 1 root root 207964411 Mar 23 18:43 HITS.pool.root.1
2026-03-24 02:43:04 (14032): Guest Log: -rwxrwxrwx. 1 root root      8561 Mar 23 15:08 init_data.xml
2026-03-24 02:43:04 (14032): Guest Log: -rwxrwxrwx. 1 root root    597541 Mar 23 04:12 input.tar.gz
2026-03-24 02:43:04 (14032): Guest Log: -rwxrwxrwx. 1 root root   2150400 Mar 23 18:43 result.tar.gz
2026-03-24 02:43:04 (14032): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 23 04:12 start_atlas.sh
2026-03-24 02:43:04 (14032): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-24 02:43:04 (14032): VM Completion File Detected.
2026-03-24 02:43:04 (14032): Powering off VM.
2026-03-24 02:43:06 (14032): Successfully stopped VM.
2026-03-24 02:43:06 (14032): Deregistering VM. (boinc_2880b9dc780f6e54, slot#5)
2026-03-24 02:43:06 (14032): Removing network bandwidth throttle group from VM.
2026-03-24 02:43:07 (14032): Removing VM from VirtualBox.
2026-03-24 02:43:12 (14032): called boinc_finish(0)

</stderr_txt>
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