Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:19:50 (2618281): wrapper (7.7.26015): starting
04:19:50 (2618281): wrapper: running run_atlas (--nthreads 12)
[2026-03-24 04:19:50] Arguments: --nthreads 12
[2026-03-24 04:19:50] Threads: 12
[2026-03-24 04:19:50] Checking for CVMFS
[2026-03-24 04:19:50] No cvmfs_config command found, will try listing directly
[2026-03-24 04:19:50] CVMFS is ok
[2026-03-24 04:19:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 04:19:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 04:19:50] Further information can be found at the LHC@home message board.
[2026-03-24 04:19:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 04:19:50] Checking for apptainer binary...
[2026-03-24 04:19:50] which: no apptainer in ((null))
[2026-03-24 04:19:50] apptainer is not installed, using version from CVMFS
[2026-03-24 04:19:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 04:19:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-24 04:19:50] apptainer works
[2026-03-24 04:19:50] Set ATHENA_PROC_NUMBER=12
[2026-03-24 04:19:50] Set ATHENA_CORE_NUMBER=12
[2026-03-24 04:19:50] Starting ATLAS job with PandaID=7062356183
[2026-03-24 04:19:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 05:35:15]  *** The last 200 lines of the pilot log: ***
[2026-03-24 05:35:15]  status=None
[2026-03-24 05:35:15]  status_code=0
[2026-03-24 05:35:15]  storage_token=
[2026-03-24 05:35:15]  surl=/var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062356183/log.49181154._001167.job.log.tgz.1
[2026-03-24 05:35:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/3a/log.49181154._001167.job.log.tgz.1
[2026-03-24 05:35:15]  workdir=None
[2026-03-24 05:35:15] ]
[2026-03-24 05:35:15] 2026-03-24 04:34:24,729 | INFO     | transferring file log.49181154._001167.job.log.tgz.1 from /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062356183/log.49181154._001167.job.log.tgz.1 to /var/lib/
[2026-03-24 05:35:15] 2026-03-24 04:34:24,729 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062356183/log.49181154._001167.job.log.tgz.1 /var/lib/boinc/var/slot120/slots/2/
[2026-03-24 05:35:15] 2026-03-24 04:34:24,743 | INFO     | adding to output.list: log.49181154._001167.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/3a/log.49181154._001167.job.log.tg
[2026-03-24 05:35:15] 2026-03-24 04:34:24,744 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-24 05:35:15] 2026-03-24 04:34:24,744 | INFO     | summary of transferred files:
[2026-03-24 05:35:15] 2026-03-24 04:34:24,744 | INFO     |  -- lfn=log.49181154._001167.job.log.tgz.1, status_code=0, status=transferred
[2026-03-24 05:35:15] 2026-03-24 04:34:24,747 | INFO     | stage-out finished correctly
[2026-03-24 05:35:15] 2026-03-24 04:34:25,336 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-24 05:35:15] 2026-03-24 04:34:25,381 | INFO     | job 7062356183 has state=finished
[2026-03-24 05:35:15] 2026-03-24 04:34:25,382 | INFO     | preparing for final server update for job 7062356183 in state='finished'
[2026-03-24 05:35:15] 2026-03-24 04:34:25,382 | INFO     | reading metadata from: /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062356183/jobReport.json
[2026-03-24 05:35:15] 2026-03-24 04:34:25,383 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot120/slots/2/workernode_map.json
[2026-03-24 05:35:15] 2026-03-24 04:34:25,384 | INFO     | this job has now completed (state=finished)
[2026-03-24 05:35:15] 2026-03-24 04:34:25,384 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 05:35:15] 2026-03-24 04:34:25,384 | INFO     | log transfer has been attempted: DONE
[2026-03-24 05:35:15] 2026-03-24 04:34:25,384 | INFO     | job 7062356183 has finished - writing final server update
[2026-03-24 05:35:15] 2026-03-24 04:34:25,384 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1591888/.job.ad'
[2026-03-24 05:35:15] 2026-03-24 04:34:25,384 | INFO     | total number of processed events: 400 (read)
[2026-03-24 05:35:15] 2026-03-24 04:34:25,402 | INFO     | using path: /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062356183/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 05:35:15] 2026-03-24 04:34:25,402 | INFO     | extracted standard info from prmon json
[2026-03-24 05:35:15] 2026-03-24 04:34:25,402 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 05:35:15] 2026-03-24 04:34:25,402 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 05:35:15] 2026-03-24 04:34:25,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 05:35:15] 2026-03-24 04:34:25,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 05:35:15] 2026-03-24 04:34:25,404 | INFO     | fitting pss+swap vs Time
[2026-03-24 05:35:15] 2026-03-24 04:34:25,404 | INFO     | sum of square deviations: 89127252.5
[2026-03-24 05:35:15] 2026-03-24 04:34:25,404 | INFO     | sum of deviations: -301658755.5
[2026-03-24 05:35:15] 2026-03-24 04:34:25,404 | INFO     | mean x: 1774324709.5
[2026-03-24 05:35:15] 2026-03-24 04:34:25,404 | INFO     | mean y: 2731666.1363636362
[2026-03-24 05:35:15] 2026-03-24 04:34:25,404 | INFO     | intersect: 6008084335.575704
[2026-03-24 05:35:15] 2026-03-24 04:34:25,404 | INFO     | chi2: 0.001421219577718172
[2026-03-24 05:35:15] 2026-03-24 04:34:25,404 | INFO     | current memory leak: -3.38 B/s (using 66 data points, chi2=0.00)
[2026-03-24 05:35:15] 2026-03-24 04:34:25,404 | INFO     | could have reported an average CPU frequency of 3645 MHz (6 samples)
[2026-03-24 05:35:15] 2026-03-24 04:34:25,405 | INFO     | ..............................
[2026-03-24 05:35:15] 2026-03-24 04:34:25,405 | INFO     | . Timing measurements:
[2026-03-24 05:35:15] 2026-03-24 04:34:25,405 | INFO     | . get job = 0 s
[2026-03-24 05:35:15] 2026-03-24 04:34:25,405 | INFO     | . initial setup = 4 s
[2026-03-24 05:35:15] 2026-03-24 04:34:25,405 | INFO     | . payload setup = 5 s
[2026-03-24 05:35:15] 2026-03-24 04:34:25,405 | INFO     | . stage-in = 0 s
[2026-03-24 05:35:15] 2026-03-24 04:34:25,405 | INFO     | . payload execution = 4442 s
[2026-03-24 05:35:15] 2026-03-24 04:34:25,405 | INFO     | . stage-out = 0 s
[2026-03-24 05:35:15] 2026-03-24 04:34:25,405 | INFO     | . log creation = 0 s
[2026-03-24 05:35:15] 2026-03-24 04:34:25,405 | INFO     | ..............................
[2026-03-24 05:35:15] 2026-03-24 04:34:25,692 | INFO     | 
[2026-03-24 05:35:15] 2026-03-24 04:34:25,692 | INFO     | job summary report
[2026-03-24 05:35:15] 2026-03-24 04:34:25,692 | INFO     | --------------------------------------------------
[2026-03-24 05:35:15] 2026-03-24 04:34:25,692 | INFO     | PanDA job id: 7062356183
[2026-03-24 05:35:15] 2026-03-24 04:34:25,692 | INFO     | task id: 49181154
[2026-03-24 05:35:15] 2026-03-24 04:34:25,692 | INFO     | errors: (none)
[2026-03-24 05:35:15] 2026-03-24 04:34:25,692 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | pilot state: finished 
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | transexitcode: 0
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | exeerrorcode: 0
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | exeerrordiag: 
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | exitcode: 0
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | exitmsg: OK
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | cpuconsumptiontime: 49335 s
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | nevents: 400
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | neventsw: 0
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | pid: 2636169
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | pgrp: 2636169
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | corecount: 12
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | event service: False
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | sizes: {0: 2279823, 1: 2280284, 11: 2280284, 4452: 2306480, 4453: 2315696}
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | --------------------------------------------------
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | 
[2026-03-24 05:35:15] 2026-03-24 04:34:25,693 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/2
[2026-03-24 05:35:15] 2026-03-24 04:34:25,707 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | job 7062356183 has completed (purged errors)
[2026-03-24 05:35:15] 2026-03-24 04:34:25,708 | INFO     | overall cleanup function is called
[2026-03-24 05:35:15] 2026-03-24 04:34:26,653 | WARNING  | process 2636169 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 05:35:15] 2026-03-24 04:34:26,715 | INFO     | --- collectZombieJob: --- 10, [2636169]
[2026-03-24 05:35:15] 2026-03-24 04:34:26,716 | INFO     | zombie collector waiting for pid 2636169
[2026-03-24 05:35:15] 2026-03-24 04:34:26,716 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 05:35:15] 2026-03-24 04:34:26,716 | INFO     | collected zombie processes
[2026-03-24 05:35:15] 2026-03-24 04:34:26,716 | INFO     | will attempt to kill all subprocesses of pid=2636169
[2026-03-24 05:35:15] 2026-03-24 04:34:27,548 | INFO     | using path: /var/lib/boinc/var/slot120/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 05:35:15] 2026-03-24 04:34:27,548 | INFO     | using path: /var/lib/boinc/var/slot120/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 05:35:15] 2026-03-24 04:34:27,549 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-24 05:35:15] 2026-03-24 04:34:27,549 | WARNING  | maxPSS not found in memory monitor output
[2026-03-24 05:35:15] 2026-03-24 04:34:27,549 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062356183/payload.stdout) since it has not been created yet
[2026-03-24 05:35:15] 2026-03-24 04:34:27,549 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/2
[2026-03-24 05:35:15] 2026-03-24 04:34:27,564 | INFO     | sufficient remaining disk space (18755878912 B)
[2026-03-24 05:35:15] 2026-03-24 04:34:27,564 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-24 05:35:15] 2026-03-24 04:34:27,564 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062356183/HITS.49181154._001167.pool.root.1 since it does not exist
[2026-03-24 05:35:15] 2026-03-24 04:34:28,262 | INFO     | process IDs to be killed: [2636169] (in reverse order)
[2026-03-24 05:35:15] 2026-03-24 04:34:28,427 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 05:35:15] 2026-03-24 04:34:28,428 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 05:35:15] 2026-03-24 04:34:28,480 | INFO     | did not find any defunct processes belonging to 2636169
[2026-03-24 05:35:15] 2026-03-24 04:34:28,508 | INFO     | number of running child processes to parent process 2636169: 1
[2026-03-24 05:35:15] 2026-03-24 04:34:28,508 | INFO     | maximum number of monitored processes: 6
[2026-03-24 05:35:15] 2026-03-24 04:34:28,509 | INFO     | aborting job monitoring since job object (job id=7062356183) has expired
[2026-03-24 05:35:15] 2026-03-24 04:34:28,520 | INFO     | did not find any defunct processes belonging to 2636169
[2026-03-24 05:35:15] 2026-03-24 04:34:28,521 | INFO     | ready for new job
[2026-03-24 05:35:15] 2026-03-24 04:34:28,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 05:35:15] 2026-03-24 04:34:28,522 | INFO     | **************************************
[2026-03-24 05:35:15] 2026-03-24 04:34:28,522 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 05:35:15] 2026-03-24 04:34:28,522 | INFO     | **************************************
[2026-03-24 05:35:15] 2026-03-24 04:34:28,522 | INFO     | 
[2026-03-24 05:35:15] 2026-03-24 04:34:28,528 | INFO     | architecture information:
[2026-03-24 05:35:15] 2026-03-24 04:34:28,528 | INFO     | executing command: cat /etc/os-release
[2026-03-24 05:35:15] 2026-03-24 04:34:28,544 | INFO     | cat /etc/os-release:
[2026-03-24 05:35:15] NAME="CentOS Linux"
[2026-03-24 05:35:15] VERSION="7 (Core)"
[2026-03-24 05:35:15] ID="centos"
[2026-03-24 05:35:15] ID_LIKE="rhel fedora"
[2026-03-24 05:35:15] VERSION_ID="7"
[2026-03-24 05:35:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 05:35:15] ANSI_COLOR="0;31"
[2026-03-24 05:35:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 05:35:15] HOME_URL="https://www.centos.org/"
[2026-03-24 05:35:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 05:35:15] 
[2026-03-24 05:35:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 05:35:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 05:35:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 05:35:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 05:35:15] 
[2026-03-24 05:35:15] 2026-03-24 04:34:28,544 | INFO     | **************************************
[2026-03-24 05:35:15] 2026-03-24 04:34:29,047 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/2
[2026-03-24 05:35:15] 2026-03-24 04:34:29,065 | INFO     | sufficient remaining disk space (18754830336 B)
[2026-03-24 05:35:15] 2026-03-24 04:34:29,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 05:35:15] 2026-03-24 04:34:29,065 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 05:35:15] 2026-03-24 04:34:29,065 | INFO     | update_server=False
[2026-03-24 05:35:15] 2026-03-24 04:34:29,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 05:35:15] 2026-03-24 04:34:29,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 05:35:15] 2026-03-24 04:34:29,066 | INFO     | will abort loop
[2026-03-24 05:35:15] 2026-03-24 04:34:29,555 | INFO     | all data control threads have been joined
[2026-03-24 05:35:15] 2026-03-24 04:34:29,992 | INFO     | all job control threads have been joined
[2026-03-24 05:35:15] 2026-03-24 04:34:30,070 | INFO     | [job] retrieve thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:30,071 | INFO     | [job] job monitor thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:30,249 | INFO     | all payload control threads have been joined
[2026-03-24 05:35:15] 2026-03-24 04:34:30,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 05:35:15] 2026-03-24 04:34:30,335 | INFO     | job.realtimelogging is not enabled
[2026-03-24 05:35:15] 2026-03-24 04:34:30,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 05:35:15] 2026-03-24 04:34:30,560 | INFO     | [data] control thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:30,714 | INFO     | [payload] failed_post thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:30,880 | INFO     | [job] validate thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:30,936 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:30,994 | INFO     | [job] control thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:31,224 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:31,225 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:31,255 | INFO     | [payload] control thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:31,277 | INFO     | [data] copytool_in thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:31,341 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:31,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 05:35:15] 2026-03-24 04:34:31,469 | INFO     | [job] queue monitor thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:31,653 | INFO     | [payload] validate_post thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:32,310 | INFO     | [data] copytool_out thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:35,393 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 05:35:15] 2026-03-24 04:34:56,736 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-24 05:35:15] 2026-03-24 04:34:57,596 | INFO     | PID=2627548 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-24 05:35:15] 2026-03-24 04:34:57,597 | INFO     | .. there are 15 such processes running
[2026-03-24 05:35:15] 2026-03-24 04:34:57,597 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 05:35:15] 2026-03-24 04:34:57,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 05:35:15] 2026-03-24 04:34:57,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 05:35:15] 2026-03-24 04:35:08,435 | INFO     | [monitor] cgroup control has ended
[2026-03-24 05:35:15] 2026-03-24 04:35:09,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22914355791680)>', '<ExcThread(monitor, started 22914042668800)>']
[2026-03-24 05:35:15] 2026-03-24 04:35:10,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 05:35:15] 2026-03-24 04:35:10,662 | INFO     | [monitor] control thread has ended
[2026-03-24 05:35:15] 2026-03-24 04:35:14,771 | INFO     | all workflow threads have been joined
[2026-03-24 05:35:15] 2026-03-24 04:35:14,772 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 05:35:15] 2026-03-24 04:35:14,772 | INFO     | traces error code: 0
[2026-03-24 05:35:15] 2026-03-24 04:35:14,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 05:35:15] 2026-03-24 04:35:14,878 [wrapper] ==== pilot stdout END ====
[2026-03-24 05:35:15] 2026-03-24 04:35:14,881 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 05:35:15] 2026-03-24 04:35:14,883 [wrapper] pilotpid: 2627548
[2026-03-24 05:35:15] 2026-03-24 04:35:14,886 [wrapper] Pilot exit status: 0
[2026-03-24 05:35:15] 2026-03-24 04:35:14,894 [wrapper] pandaids: 7062356183
[2026-03-24 05:35:15] 2026-03-24 04:35:14,999 [wrapper] cleanup supervisor_pilot 2936782 2627549
[2026-03-24 05:35:15] 2026-03-24 04:35:15,002 [wrapper] Test setup, not cleaning
[2026-03-24 05:35:15] 2026-03-24 04:35:15,004 [wrapper] apfmon messages muted
[2026-03-24 05:35:15] 2026-03-24 04:35:15,006 [wrapper] ==== wrapper stdout END ====
[2026-03-24 05:35:15] 2026-03-24 04:35:15,009 [wrapper] ==== wrapper stderr END ====
[2026-03-24 05:35:15]  *** Error codes and diagnostics ***
[2026-03-24 05:35:15]     "exeErrorCode": 0,
[2026-03-24 05:35:15]     "exeErrorDiag": "",
[2026-03-24 05:35:15]     "pilotErrorCode": 0,
[2026-03-24 05:35:15]     "pilotErrorDiag": "",
[2026-03-24 05:35:15]  *** Listing of results directory ***
[2026-03-24 05:35:15] total 483932
[2026-03-24 05:35:15] -rwx------. 1 boinc boinc     36322 Mar 22 23:32 runpilot2-wrapper.sh
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc    585013 Mar 22 23:34 pilot3.tar.gz
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc      5111 Mar 22 23:34 queuedata.json
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc       100 Mar 24 04:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 05:35:15] -rwxr-xr-x. 1 boinc boinc      7986 Mar 24 04:19 run_atlas
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc       105 Mar 24 04:19 job.xml
[2026-03-24 05:35:15] -rw-r--r--. 2 boinc boinc 244142790 Mar 24 04:19 EVNT.49134557._000025.pool.root.1
[2026-03-24 05:35:15] -rw-r--r--. 2 boinc boinc     15845 Mar 24 04:19 start_atlas.sh
[2026-03-24 05:35:15] drwxrwx--x. 2 boinc boinc      4096 Mar 24 04:19 shared
[2026-03-24 05:35:15] -rw-r--r--. 2 boinc boinc    597555 Mar 24 04:19 input.tar.gz
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc      6711 Mar 24 04:19 init_data.xml
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc         0 Mar 24 04:19 boinc_lockfile
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc      2611 Mar 24 04:19 pandaJob.out
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc   1010901 Mar 24 04:19 agis_schedconf.cvmfs.json
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc   1511579 Mar 24 04:19 agis_ddmendpoints.agis.ALL.json
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc       445 Mar 24 04:20 workernode_map.json
[2026-03-24 05:35:15] drwx------. 5 boinc boinc      4096 Mar 24 04:20 pilot3
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc 245387975 Mar 24 05:33 HITS.49181154._001167.pool.root.1
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc       529 Mar 24 05:34 boinc_task_state.xml
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc      1029 Mar 24 05:34 memory_monitor_summary.json
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc    369777 Mar 24 05:34 log.49181154._001167.job.log.tgz.1
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc      6346 Mar 24 05:34 heartbeat.json
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc        95 Mar 24 05:34 pilot_heartbeat.json
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc        27 Mar 24 05:35 wrapper_checkpoint.txt
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc      8192 Mar 24 05:35 boinc_mmap_file
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc      4904 Mar 24 05:35 pilotlog.txt
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc    662421 Mar 24 05:35 log.49181154._001167.job.log.1
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc       357 Mar 24 05:35 output.list
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc       620 Mar 24 05:35 runtime_log
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc   1054720 Mar 24 05:35 result.tar.gz
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc      9223 Mar 24 05:35 runtime_log.err
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc       663 Mar 24 05:35 bATKDmZWgO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmoE7LDmVk7F5m.diag
[2026-03-24 05:35:15] -rw-r--r--. 1 boinc boinc     21872 Mar 24 05:35 stderr.txt
[2026-03-24 05:35:15] HITS file was successfully produced:
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc 245387975 Mar 24 05:33 shared/HITS.pool.root.1
[2026-03-24 05:35:15]  *** Contents of shared directory: ***
[2026-03-24 05:35:15] total 479704
[2026-03-24 05:35:15] -rw-r--r--. 2 boinc boinc 244142790 Mar 24 04:19 ATLAS.root_0
[2026-03-24 05:35:15] -rw-r--r--. 2 boinc boinc     15845 Mar 24 04:19 start_atlas.sh
[2026-03-24 05:35:15] -rw-r--r--. 2 boinc boinc    597555 Mar 24 04:19 input.tar.gz
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc 245387975 Mar 24 05:33 HITS.pool.root.1
[2026-03-24 05:35:15] -rw-------. 1 boinc boinc   1054720 Mar 24 05:35 result.tar.gz
05:35:16 (2618281): run_atlas exited; CPU time 49481.241931
05:35:16 (2618281): called boinc_finish(0)

</stderr_txt>
]]>

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