Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:29:34 (4117215): wrapper (7.7.26015): starting
05:29:34 (4117215): wrapper: running run_atlas (--nthreads 12)
[2026-03-24 05:29:34] Arguments: --nthreads 12
[2026-03-24 05:29:34] Threads: 12
[2026-03-24 05:29:34] Checking for CVMFS
[2026-03-24 05:29:34] No cvmfs_config command found, will try listing directly
[2026-03-24 05:29:34] CVMFS is ok
[2026-03-24 05:29:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 05:29:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 05:29:34] Further information can be found at the LHC@home message board.
[2026-03-24 05:29:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 05:29:34] Checking for apptainer binary...
[2026-03-24 05:29:34] which: no apptainer in ((null))
[2026-03-24 05:29:34] apptainer is not installed, using version from CVMFS
[2026-03-24 05:29:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 05:29:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-24 05:29:34] apptainer works
[2026-03-24 05:29:34] Set ATHENA_PROC_NUMBER=12
[2026-03-24 05:29:34] Set ATHENA_CORE_NUMBER=12
[2026-03-24 05:29:34] Starting ATLAS job with PandaID=7062339518
[2026-03-24 05:29:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 06:39:58]  *** The last 200 lines of the pilot log: ***
[2026-03-24 06:39:58]  filetype=log
[2026-03-24 06:39:58]  guid=fc29b8b7-e469-4878-b7ec-8ac8587efc6e
[2026-03-24 06:39:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-24 06:39:58]  is_altstaged=None
[2026-03-24 06:39:58]  is_tar=False
[2026-03-24 06:39:58]  lfn=log.49181154._000905.job.log.tgz.1
[2026-03-24 06:39:58]  mtime=0
[2026-03-24 06:39:58]  protocol_id=None
[2026-03-24 06:39:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-24 06:39:58]  replicas=None
[2026-03-24 06:39:58]  scope=mc23_13p6TeV
[2026-03-24 06:39:58]  status=None
[2026-03-24 06:39:58]  status_code=0
[2026-03-24 06:39:58]  storage_token=
[2026-03-24 06:39:58]  surl=/var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7062339518/log.49181154._000905.job.log.tgz.1
[2026-03-24 06:39:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/2b/log.49181154._000905.job.log.tgz.1
[2026-03-24 06:39:58]  workdir=None
[2026-03-24 06:39:58] ]
[2026-03-24 06:39:58] 2026-03-24 05:39:01,904 | INFO     | transferring file log.49181154._000905.job.log.tgz.1 from /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7062339518/log.49181154._000905.job.log.tgz.1 to /var/lib/
[2026-03-24 06:39:58] 2026-03-24 05:39:01,904 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7062339518/log.49181154._000905.job.log.tgz.1 /var/lib/boinc/var/slot144/slots/1/
[2026-03-24 06:39:58] 2026-03-24 05:39:01,921 | INFO     | adding to output.list: log.49181154._000905.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/2b/log.49181154._000905.job.log.tg
[2026-03-24 06:39:58] 2026-03-24 05:39:01,922 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-24 06:39:58] 2026-03-24 05:39:01,922 | INFO     | summary of transferred files:
[2026-03-24 06:39:58] 2026-03-24 05:39:01,922 | INFO     |  -- lfn=log.49181154._000905.job.log.tgz.1, status_code=0, status=transferred
[2026-03-24 06:39:58] 2026-03-24 05:39:01,922 | INFO     | stage-out finished correctly
[2026-03-24 06:39:58] 2026-03-24 05:39:02,586 | INFO     | time since job start (4157s) is within the limit (345600.0s)
[2026-03-24 06:39:58] 2026-03-24 05:39:04,152 | INFO     | monitor loop #309: job 0:7062339518 is in state 'finished'
[2026-03-24 06:39:58] 2026-03-24 05:39:04,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-24 06:39:58] 2026-03-24 05:39:04,339 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-24 06:39:58] 2026-03-24 05:39:04,592 | INFO     | time since job start (4159s) is within the limit (345600.0s)
[2026-03-24 06:39:58] 2026-03-24 05:39:05,584 | INFO     | job 7062339518 has state=finished
[2026-03-24 06:39:58] 2026-03-24 05:39:05,585 | INFO     | preparing for final server update for job 7062339518 in state='finished'
[2026-03-24 06:39:58] 2026-03-24 05:39:05,585 | INFO     | reading metadata from: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7062339518/jobReport.json
[2026-03-24 06:39:58] 2026-03-24 05:39:05,586 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot144/slots/1/workernode_map.json
[2026-03-24 06:39:58] 2026-03-24 05:39:05,587 | INFO     | this job has now completed (state=finished)
[2026-03-24 06:39:58] 2026-03-24 05:39:05,587 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 06:39:58] 2026-03-24 05:39:05,587 | INFO     | log transfer has been attempted: DONE
[2026-03-24 06:39:58] 2026-03-24 05:39:05,587 | INFO     | job 7062339518 has finished - writing final server update
[2026-03-24 06:39:58] 2026-03-24 05:39:05,587 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_343860/.job.ad'
[2026-03-24 06:39:58] 2026-03-24 05:39:05,587 | INFO     | total number of processed events: 400 (read)
[2026-03-24 06:39:58] 2026-03-24 05:39:05,605 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7062339518/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 06:39:58] 2026-03-24 05:39:05,605 | INFO     | extracted standard info from prmon json
[2026-03-24 06:39:58] 2026-03-24 05:39:05,606 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 06:39:58] 2026-03-24 05:39:05,606 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 06:39:58] 2026-03-24 05:39:05,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 06:39:58] 2026-03-24 05:39:05,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 06:39:58] 2026-03-24 05:39:05,607 | INFO     | fitting pss+swap vs Time
[2026-03-24 06:39:58] 2026-03-24 05:39:05,607 | INFO     | sum of square deviations: 70364110.0
[2026-03-24 06:39:58] 2026-03-24 05:39:05,607 | INFO     | sum of deviations: -1112337562.0
[2026-03-24 06:39:58] 2026-03-24 05:39:05,607 | INFO     | mean x: 1774328740.0
[2026-03-24 06:39:58] 2026-03-24 05:39:05,607 | INFO     | mean y: 2737243.655737705
[2026-03-24 06:39:58] 2026-03-24 05:39:05,607 | INFO     | intersect: 28051873441.614216
[2026-03-24 06:39:58] 2026-03-24 05:39:05,607 | INFO     | chi2: 0.002847941019224395
[2026-03-24 06:39:58] 2026-03-24 05:39:05,607 | INFO     | current memory leak: -15.81 B/s (using 61 data points, chi2=0.00)
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | could have reported an average CPU frequency of 3616 MHz (6 samples)
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | ..............................
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | . Timing measurements:
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | . get job = 0 s
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | . initial setup = 4 s
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | . payload setup = 5 s
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | . stage-in = 0 s
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | . payload execution = 4136 s
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | . stage-out = 0 s
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | . log creation = 0 s
[2026-03-24 06:39:58] 2026-03-24 05:39:05,608 | INFO     | ..............................
[2026-03-24 06:39:58] 2026-03-24 05:39:05,653 | INFO     | 
[2026-03-24 06:39:58] 2026-03-24 05:39:05,653 | INFO     | job summary report
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | --------------------------------------------------
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | PanDA job id: 7062339518
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | task id: 49181154
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | errors: (none)
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | pilot state: finished 
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | transexitcode: 0
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | exeerrorcode: 0
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | exeerrordiag: 
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | exitcode: 0
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | exitmsg: OK
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | cpuconsumptiontime: 45806 s
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | nevents: 400
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | neventsw: 0
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | pid: 4127573
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | pgrp: 4127573
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | corecount: 12
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | event service: False
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | sizes: {0: 2280258, 11: 2280258, 4145: 2306247, 4146: 2315269, 4148: 2315325, 4149: 2315519}
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | --------------------------------------------------
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | 
[2026-03-24 06:39:58] 2026-03-24 05:39:05,654 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/1
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,676 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 06:39:58] 2026-03-24 05:39:05,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,676 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 06:39:58] 2026-03-24 05:39:05,676 | INFO     | job 7062339518 has completed (purged errors)
[2026-03-24 06:39:58] 2026-03-24 05:39:05,676 | INFO     | overall cleanup function is called
[2026-03-24 06:39:58] 2026-03-24 05:39:06,684 | INFO     | --- collectZombieJob: --- 10, [4127573]
[2026-03-24 06:39:58] 2026-03-24 05:39:06,684 | INFO     | zombie collector waiting for pid 4127573
[2026-03-24 06:39:58] 2026-03-24 05:39:06,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 06:39:58] 2026-03-24 05:39:06,684 | INFO     | collected zombie processes
[2026-03-24 06:39:58] 2026-03-24 05:39:06,684 | INFO     | will attempt to kill all subprocesses of pid=4127573
[2026-03-24 06:39:58] 2026-03-24 05:39:07,044 | INFO     | process IDs to be killed: [4127573] (in reverse order)
[2026-03-24 06:39:58] 2026-03-24 05:39:07,190 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 06:39:58] 2026-03-24 05:39:07,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 06:39:58] 2026-03-24 05:39:07,215 | INFO     | did not find any defunct processes belonging to 4127573
[2026-03-24 06:39:58] 2026-03-24 05:39:07,239 | INFO     | did not find any defunct processes belonging to 4127573
[2026-03-24 06:39:58] 2026-03-24 05:39:07,239 | INFO     | ready for new job
[2026-03-24 06:39:58] 2026-03-24 05:39:07,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 06:39:58] 2026-03-24 05:39:07,240 | INFO     | **************************************
[2026-03-24 06:39:58] 2026-03-24 05:39:07,240 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 06:39:58] 2026-03-24 05:39:07,240 | INFO     | **************************************
[2026-03-24 06:39:58] 2026-03-24 05:39:07,240 | INFO     | 
[2026-03-24 06:39:58] 2026-03-24 05:39:07,246 | INFO     | architecture information:
[2026-03-24 06:39:58] 2026-03-24 05:39:07,246 | INFO     | executing command: cat /etc/os-release
[2026-03-24 06:39:58] 2026-03-24 05:39:07,260 | INFO     | cat /etc/os-release:
[2026-03-24 06:39:58] NAME="CentOS Linux"
[2026-03-24 06:39:58] VERSION="7 (Core)"
[2026-03-24 06:39:58] ID="centos"
[2026-03-24 06:39:58] ID_LIKE="rhel fedora"
[2026-03-24 06:39:58] VERSION_ID="7"
[2026-03-24 06:39:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 06:39:58] ANSI_COLOR="0;31"
[2026-03-24 06:39:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 06:39:58] HOME_URL="https://www.centos.org/"
[2026-03-24 06:39:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 06:39:58] 
[2026-03-24 06:39:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 06:39:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 06:39:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 06:39:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 06:39:58] 
[2026-03-24 06:39:58] 2026-03-24 05:39:07,264 | INFO     | **************************************
[2026-03-24 06:39:58] 2026-03-24 05:39:07,767 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/1
[2026-03-24 06:39:58] 2026-03-24 05:39:07,786 | INFO     | sufficient remaining disk space (20126367744 B)
[2026-03-24 06:39:58] 2026-03-24 05:39:07,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 06:39:58] 2026-03-24 05:39:07,787 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 06:39:58] 2026-03-24 05:39:07,787 | INFO     | update_server=False
[2026-03-24 06:39:58] 2026-03-24 05:39:07,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 06:39:58] 2026-03-24 05:39:07,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 06:39:58] 2026-03-24 05:39:07,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 06:39:58] 2026-03-24 05:39:07,788 | INFO     | aborting loop
[2026-03-24 06:39:58] 2026-03-24 05:39:07,900 | INFO     | all data control threads have been joined
[2026-03-24 06:39:58] 2026-03-24 05:39:08,274 | INFO     | all job control threads have been joined
[2026-03-24 06:39:58] 2026-03-24 05:39:08,793 | INFO     | [job] retrieve thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:08,793 | INFO     | [job] job monitor thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:08,906 | INFO     | [data] control thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:08,911 | INFO     | [job] validate thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:09,073 | INFO     | all payload control threads have been joined
[2026-03-24 06:39:58] 2026-03-24 05:39:09,180 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:09,196 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:09,280 | INFO     | [job] control thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:09,366 | INFO     | [data] copytool_in thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:09,601 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:09,773 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:09,794 | INFO     | [data] copytool_out thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:09,865 | INFO     | [payload] failed_post thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:10,078 | INFO     | [payload] control thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:10,186 | INFO     | [payload] validate_post thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:10,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 06:39:58] 2026-03-24 05:39:10,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 06:39:58] 2026-03-24 05:39:11,669 | INFO     | [job] queue monitor thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:14,403 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 06:39:58] 2026-03-24 05:39:38,071 | INFO     | PID=4121792 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-24 06:39:58] 2026-03-24 05:39:38,071 | INFO     | .. there are 14 such processes running
[2026-03-24 06:39:58] 2026-03-24 05:39:38,072 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 06:39:58] 2026-03-24 05:39:38,072 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 06:39:58] 2026-03-24 05:39:38,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 06:39:58] 2026-03-24 05:39:51,374 | INFO     | [monitor] cgroup control has ended
[2026-03-24 06:39:58] 2026-03-24 05:39:53,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22364774057792)>', '<ExcThread(monitor, started 22364537767680)>']
[2026-03-24 06:39:58] 2026-03-24 05:39:53,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 06:39:58] 2026-03-24 05:39:53,148 | INFO     | [monitor] control thread has ended
[2026-03-24 06:39:58] 2026-03-24 05:39:58,005 | INFO     | all workflow threads have been joined
[2026-03-24 06:39:58] 2026-03-24 05:39:58,005 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 06:39:58] 2026-03-24 05:39:58,005 | INFO     | traces error code: 0
[2026-03-24 06:39:58] 2026-03-24 05:39:58,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 06:39:58] 2026-03-24 05:39:58,167 [wrapper] ==== pilot stdout END ====
[2026-03-24 06:39:58] 2026-03-24 05:39:58,170 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 06:39:58] 2026-03-24 05:39:58,172 [wrapper] pilotpid: 4121792
[2026-03-24 06:39:58] 2026-03-24 05:39:58,174 [wrapper] Pilot exit status: 0
[2026-03-24 06:39:58] 2026-03-24 05:39:58,182 [wrapper] pandaids: 7062339518
[2026-03-24 06:39:58] 2026-03-24 05:39:58,285 [wrapper] cleanup supervisor_pilot  198634 4121793
[2026-03-24 06:39:58] 2026-03-24 05:39:58,287 [wrapper] Test setup, not cleaning
[2026-03-24 06:39:58] 2026-03-24 05:39:58,289 [wrapper] apfmon messages muted
[2026-03-24 06:39:58] 2026-03-24 05:39:58,291 [wrapper] ==== wrapper stdout END ====
[2026-03-24 06:39:58] 2026-03-24 05:39:58,294 [wrapper] ==== wrapper stderr END ====
[2026-03-24 06:39:58]  *** Error codes and diagnostics ***
[2026-03-24 06:39:58]     "exeErrorCode": 0,
[2026-03-24 06:39:58]     "exeErrorDiag": "",
[2026-03-24 06:39:58]     "pilotErrorCode": 0,
[2026-03-24 06:39:58]     "pilotErrorDiag": "",
[2026-03-24 06:39:58]  *** Listing of results directory ***
[2026-03-24 06:39:58] total 480192
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc    585013 Mar 22 20:50 pilot3.tar.gz
[2026-03-24 06:39:58] -rwx------. 1 boinc boinc     36322 Mar 22 21:14 runpilot2-wrapper.sh
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc      5111 Mar 22 21:15 queuedata.json
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc       100 Mar 24 05:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 06:39:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar 24 05:29 run_atlas
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc       105 Mar 24 05:29 job.xml
[2026-03-24 06:39:58] -rw-r--r--. 2 boinc boinc     15845 Mar 24 05:29 start_atlas.sh
[2026-03-24 06:39:58] drwxrwx--x. 2 boinc boinc      4096 Mar 24 05:29 shared
[2026-03-24 06:39:58] -rw-r--r--. 2 boinc boinc    597553 Mar 24 05:29 input.tar.gz
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc      6710 Mar 24 05:29 init_data.xml
[2026-03-24 06:39:58] -rw-r--r--. 2 boinc boinc 243504521 Mar 24 05:29 EVNT.49134557._000023.pool.root.1
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc         0 Mar 24 05:29 boinc_lockfile
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc      2612 Mar 24 05:29 pandaJob.out
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc   1010893 Mar 24 05:29 agis_schedconf.cvmfs.json
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc   1511579 Mar 24 05:29 agis_ddmendpoints.agis.ALL.json
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc       444 Mar 24 05:29 workernode_map.json
[2026-03-24 06:39:58] drwx------. 5 boinc boinc      4096 Mar 24 05:29 pilot3
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc 242259070 Mar 24 06:38 HITS.49181154._000905.pool.root.1
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc       529 Mar 24 06:38 boinc_task_state.xml
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc      1024 Mar 24 06:38 memory_monitor_summary.json
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc    380282 Mar 24 06:39 log.49181154._000905.job.log.tgz.1
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc      6350 Mar 24 06:39 heartbeat.json
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc        95 Mar 24 06:39 pilot_heartbeat.json
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc      8192 Mar 24 06:39 boinc_mmap_file
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc        27 Mar 24 06:39 wrapper_checkpoint.txt
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc      4830 Mar 24 06:39 pilotlog.txt
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc    625281 Mar 24 06:39 log.49181154._000905.job.log.1
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc       357 Mar 24 06:39 output.list
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc       620 Mar 24 06:39 runtime_log
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc   1024000 Mar 24 06:39 result.tar.gz
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc      9223 Mar 24 06:39 runtime_log.err
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc       663 Mar 24 06:39 PZlLDmaMeO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmh6LDmWbp7Lo.diag
[2026-03-24 06:39:58] -rw-r--r--. 1 boinc boinc     21181 Mar 24 06:39 stderr.txt
[2026-03-24 06:39:58] HITS file was successfully produced:
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc 242259070 Mar 24 06:38 shared/HITS.pool.root.1
[2026-03-24 06:39:58]  *** Contents of shared directory: ***
[2026-03-24 06:39:58] total 475992
[2026-03-24 06:39:58] -rw-r--r--. 2 boinc boinc     15845 Mar 24 05:29 start_atlas.sh
[2026-03-24 06:39:58] -rw-r--r--. 2 boinc boinc    597553 Mar 24 05:29 input.tar.gz
[2026-03-24 06:39:58] -rw-r--r--. 2 boinc boinc 243504521 Mar 24 05:29 ATLAS.root_0
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc 242259070 Mar 24 06:38 HITS.pool.root.1
[2026-03-24 06:39:58] -rw-------. 1 boinc boinc   1024000 Mar 24 06:39 result.tar.gz
06:39:59 (4117215): run_atlas exited; CPU time 45944.663132
06:39:59 (4117215): called boinc_finish(0)

</stderr_txt>
]]>

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