Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:20:04 (367024): wrapper (7.7.26015): starting
00:20:04 (367024): wrapper: running run_atlas (--nthreads 12)
[2026-03-23 00:20:04] Arguments: --nthreads 12
[2026-03-23 00:20:04] Threads: 12
[2026-03-23 00:20:04] Checking for CVMFS
[2026-03-23 00:20:04] No cvmfs_config command found, will try listing directly
[2026-03-23 00:20:04] CVMFS is ok
[2026-03-23 00:20:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 00:20:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 00:20:04] Further information can be found at the LHC@home message board.
[2026-03-23 00:20:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 00:20:04] Checking for apptainer binary...
[2026-03-23 00:20:04] which: no apptainer in ((null))
[2026-03-23 00:20:04] apptainer is not installed, using version from CVMFS
[2026-03-23 00:20:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 00:20:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-23 00:20:04] apptainer works
[2026-03-23 00:20:04] Set ATHENA_PROC_NUMBER=12
[2026-03-23 00:20:04] Set ATHENA_CORE_NUMBER=12
[2026-03-23 00:20:04] Starting ATLAS job with PandaID=7062337138
[2026-03-23 00:20:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 01:24:25]  *** The last 200 lines of the pilot log: ***
[2026-03-23 01:24:25]  guid=e2095ea1-6f42-4ece-a480-a351a159ac2f
[2026-03-23 01:24:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-23 01:24:25]  is_altstaged=None
[2026-03-23 01:24:25]  is_tar=False
[2026-03-23 01:24:25]  lfn=log.49181154._000858.job.log.tgz.1
[2026-03-23 01:24:25]  mtime=0
[2026-03-23 01:24:25]  protocol_id=None
[2026-03-23 01:24:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-23 01:24:25]  replicas=None
[2026-03-23 01:24:25]  scope=mc23_13p6TeV
[2026-03-23 01:24:25]  status=None
[2026-03-23 01:24:25]  status_code=0
[2026-03-23 01:24:25]  storage_token=
[2026-03-23 01:24:25]  surl=/var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7062337138/log.49181154._000858.job.log.tgz.1
[2026-03-23 01:24:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/ce/log.49181154._000858.job.log.tgz.1
[2026-03-23 01:24:25]  workdir=None
[2026-03-23 01:24:25] ]
[2026-03-23 01:24:25] 2026-03-23 00:23:21,480 | INFO     | transferring file log.49181154._000858.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7062337138/log.49181154._000858.job.log.tgz.1 to /var/lib/
[2026-03-23 01:24:25] 2026-03-23 00:23:21,480 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7062337138/log.49181154._000858.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/0/
[2026-03-23 01:24:25] 2026-03-23 00:23:21,498 | INFO     | adding to output.list: log.49181154._000858.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/ce/log.49181154._000858.job.log.tg
[2026-03-23 01:24:25] 2026-03-23 00:23:21,498 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-23 01:24:25] 2026-03-23 00:23:21,499 | INFO     | summary of transferred files:
[2026-03-23 01:24:25] 2026-03-23 00:23:21,499 | INFO     |  -- lfn=log.49181154._000858.job.log.tgz.1, status_code=0, status=transferred
[2026-03-23 01:24:25] 2026-03-23 00:23:21,499 | INFO     | stage-out finished correctly
[2026-03-23 01:24:25] 2026-03-23 00:23:21,839 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-23 01:24:25] 2026-03-23 00:23:22,594 | INFO     | time since job start (3790s) is within the limit (345600.0s)
[2026-03-23 01:24:25] 2026-03-23 00:23:22,969 | INFO     | monitor loop #281: job 0:7062337138 is in state 'finished'
[2026-03-23 01:24:25] 2026-03-23 00:23:22,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-23 01:24:25] 2026-03-23 00:23:23,893 | INFO     | job 7062337138 has state=finished
[2026-03-23 01:24:25] 2026-03-23 00:23:23,893 | INFO     | preparing for final server update for job 7062337138 in state='finished'
[2026-03-23 01:24:25] 2026-03-23 00:23:24,454 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-23 01:24:25] 2026-03-23 00:23:24,455 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7062337138/jobReport.json
[2026-03-23 01:24:25] 2026-03-23 00:23:24,456 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/0/workernode_map.json
[2026-03-23 01:24:25] 2026-03-23 00:23:24,456 | INFO     | this job has now completed (state=finished)
[2026-03-23 01:24:25] 2026-03-23 00:23:24,456 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-23 01:24:25] 2026-03-23 00:23:24,456 | INFO     | log transfer has been attempted: DONE
[2026-03-23 01:24:25] 2026-03-23 00:23:24,456 | INFO     | job 7062337138 has finished - writing final server update
[2026-03-23 01:24:25] 2026-03-23 00:23:24,456 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_326278/.job.ad'
[2026-03-23 01:24:25] 2026-03-23 00:23:24,457 | INFO     | total number of processed events: 400 (read)
[2026-03-23 01:24:25] 2026-03-23 00:23:24,473 | INFO     | using path: /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7062337138/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 01:24:25] 2026-03-23 00:23:24,473 | INFO     | extracted standard info from prmon json
[2026-03-23 01:24:25] 2026-03-23 00:23:24,473 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 01:24:25] 2026-03-23 00:23:24,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 01:24:25] 2026-03-23 00:23:24,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 01:24:25] 2026-03-23 00:23:24,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 01:24:25] 2026-03-23 00:23:24,474 | INFO     | fitting pss+swap vs Time
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | sum of square deviations: 51573060.0
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | sum of deviations: 335723443.0000001
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | mean x: 1774223582.0
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | mean y: 2754993.4363636365
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | intersect: -11546849579.19968
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | chi2: 0.001387202438698076
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | current memory leak: 6.51 B/s (using 55 data points, chi2=0.00)
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | could have reported an average CPU frequency of 4169 MHz (6 samples)
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | ..............................
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | . Timing measurements:
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | . get job = 0 s
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | . initial setup = 3 s
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | . payload setup = 3 s
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | . stage-in = 0 s
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | . payload execution = 3769 s
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | . stage-out = 0 s
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | . log creation = 0 s
[2026-03-23 01:24:25] 2026-03-23 00:23:24,475 | INFO     | ..............................
[2026-03-23 01:24:25] 2026-03-23 00:23:24,524 | INFO     | 
[2026-03-23 01:24:25] 2026-03-23 00:23:24,524 | INFO     | job summary report
[2026-03-23 01:24:25] 2026-03-23 00:23:24,524 | INFO     | --------------------------------------------------
[2026-03-23 01:24:25] 2026-03-23 00:23:24,524 | INFO     | PanDA job id: 7062337138
[2026-03-23 01:24:25] 2026-03-23 00:23:24,524 | INFO     | task id: 49181154
[2026-03-23 01:24:25] 2026-03-23 00:23:24,524 | INFO     | errors: (none)
[2026-03-23 01:24:25] 2026-03-23 00:23:24,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 01:24:25] 2026-03-23 00:23:24,524 | INFO     | pilot state: finished 
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | transexitcode: 0
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | exeerrorcode: 0
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | exeerrordiag: 
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | exitcode: 0
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | exitmsg: OK
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | cpuconsumptiontime: 41665 s
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | nevents: 400
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | neventsw: 0
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | pid: 399516
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | pgrp: 399516
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | corecount: 12
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | event service: False
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | sizes: {0: 2279996, 1: 2280258, 11: 2280286, 3777: 2306159, 3778: 2315236, 3779: 2315236, 3781: 2315558}
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | --------------------------------------------------
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | 
[2026-03-23 01:24:25] 2026-03-23 00:23:24,525 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/0
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 01:24:25] 2026-03-23 00:23:24,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 01:24:25] 2026-03-23 00:23:24,545 | INFO     | job 7062337138 has completed (purged errors)
[2026-03-23 01:24:25] 2026-03-23 00:23:24,545 | INFO     | overall cleanup function is called
[2026-03-23 01:24:25] 2026-03-23 00:23:25,553 | INFO     | --- collectZombieJob: --- 10, [399516]
[2026-03-23 01:24:25] 2026-03-23 00:23:25,553 | INFO     | zombie collector waiting for pid 399516
[2026-03-23 01:24:25] 2026-03-23 00:23:25,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 01:24:25] 2026-03-23 00:23:25,553 | INFO     | collected zombie processes
[2026-03-23 01:24:25] 2026-03-23 00:23:25,553 | INFO     | will attempt to kill all subprocesses of pid=399516
[2026-03-23 01:24:25] 2026-03-23 00:23:25,914 | INFO     | process IDs to be killed: [399516] (in reverse order)
[2026-03-23 01:24:25] 2026-03-23 00:23:26,059 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 01:24:25] 2026-03-23 00:23:26,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 01:24:25] 2026-03-23 00:23:26,079 | INFO     | did not find any defunct processes belonging to 399516
[2026-03-23 01:24:25] 2026-03-23 00:23:26,097 | INFO     | did not find any defunct processes belonging to 399516
[2026-03-23 01:24:25] 2026-03-23 00:23:26,097 | INFO     | ready for new job
[2026-03-23 01:24:25] 2026-03-23 00:23:26,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 01:24:25] 2026-03-23 00:23:26,098 | INFO     | **************************************
[2026-03-23 01:24:25] 2026-03-23 00:23:26,098 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 01:24:25] 2026-03-23 00:23:26,098 | INFO     | **************************************
[2026-03-23 01:24:25] 2026-03-23 00:23:26,098 | INFO     | 
[2026-03-23 01:24:25] 2026-03-23 00:23:26,102 | INFO     | architecture information:
[2026-03-23 01:24:25] 2026-03-23 00:23:26,102 | INFO     | executing command: cat /etc/os-release
[2026-03-23 01:24:25] 2026-03-23 00:23:26,110 | INFO     | cat /etc/os-release:
[2026-03-23 01:24:25] NAME="CentOS Linux"
[2026-03-23 01:24:25] VERSION="7 (Core)"
[2026-03-23 01:24:25] ID="centos"
[2026-03-23 01:24:25] ID_LIKE="rhel fedora"
[2026-03-23 01:24:25] VERSION_ID="7"
[2026-03-23 01:24:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 01:24:25] ANSI_COLOR="0;31"
[2026-03-23 01:24:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 01:24:25] HOME_URL="https://www.centos.org/"
[2026-03-23 01:24:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 01:24:25] 
[2026-03-23 01:24:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 01:24:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 01:24:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 01:24:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 01:24:25] 
[2026-03-23 01:24:25] 2026-03-23 00:23:26,110 | INFO     | **************************************
[2026-03-23 01:24:25] 2026-03-23 00:23:26,613 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/0
[2026-03-23 01:24:25] 2026-03-23 00:23:26,627 | INFO     | sufficient remaining disk space (110787297280 B)
[2026-03-23 01:24:25] 2026-03-23 00:23:26,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 01:24:25] 2026-03-23 00:23:26,628 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 01:24:25] 2026-03-23 00:23:26,628 | INFO     | update_server=False
[2026-03-23 01:24:25] 2026-03-23 00:23:26,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 01:24:25] 2026-03-23 00:23:26,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 01:24:25] 2026-03-23 00:23:26,628 | INFO     | aborting loop
[2026-03-23 01:24:25] 2026-03-23 00:23:26,705 | INFO     | all data control threads have been joined
[2026-03-23 01:24:25] 2026-03-23 00:23:27,054 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 01:24:25] 2026-03-23 00:23:27,633 | INFO     | [job] retrieve thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:27,634 | INFO     | [job] job monitor thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:27,694 | INFO     | all payload control threads have been joined
[2026-03-23 01:24:25] 2026-03-23 00:23:27,699 | INFO     | all job control threads have been joined
[2026-03-23 01:24:25] 2026-03-23 00:23:27,710 | INFO     | [data] control thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:27,815 | INFO     | [payload] failed_post thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:27,828 | INFO     | [job] validate thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:27,830 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:27,843 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:27,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 01:24:25] 2026-03-23 00:23:28,049 | INFO     | [data] copytool_in thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:28,353 | INFO     | [payload] validate_post thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:28,700 | INFO     | [payload] control thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:28,704 | INFO     | [job] control thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:28,905 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:29,059 | INFO     | [data] copytool_out thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:29,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 01:24:25] 2026-03-23 00:23:30,540 | INFO     | [job] queue monitor thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:31,899 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:37,413 | INFO     | job.realtimelogging is not enabled
[2026-03-23 01:24:25] 2026-03-23 00:23:38,418 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 01:24:25] 2026-03-23 00:23:56,132 | INFO     | PID=378989 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-23 01:24:25] 2026-03-23 00:23:56,133 | INFO     | .. there are 14 such processes running
[2026-03-23 01:24:25] 2026-03-23 00:23:56,133 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 01:24:25] 2026-03-23 00:23:56,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 01:24:25] 2026-03-23 00:23:56,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 01:24:25] 2026-03-23 00:24:17,609 | INFO     | [monitor] cgroup control has ended
[2026-03-23 01:24:25] 2026-03-23 00:24:19,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22635198129984)>', '<ExcThread(monitor, started 22634950817536)>']
[2026-03-23 01:24:25] 2026-03-23 00:24:20,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 01:24:25] 2026-03-23 00:24:20,254 | INFO     | [monitor] control thread has ended
[2026-03-23 01:24:25] 2026-03-23 00:24:24,671 | INFO     | all workflow threads have been joined
[2026-03-23 01:24:25] 2026-03-23 00:24:24,671 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 01:24:25] 2026-03-23 00:24:24,671 | INFO     | traces error code: 0
[2026-03-23 01:24:25] 2026-03-23 00:24:24,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 01:24:25] 2026-03-23 00:24:24,848 [wrapper] ==== pilot stdout END ====
[2026-03-23 01:24:25] 2026-03-23 00:24:24,851 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 01:24:25] 2026-03-23 00:24:24,852 [wrapper] pilotpid: 378989
[2026-03-23 01:24:25] 2026-03-23 00:24:24,855 [wrapper] Pilot exit status: 0
[2026-03-23 01:24:25] 2026-03-23 00:24:24,862 [wrapper] pandaids: 7062337138
[2026-03-23 01:24:25] 2026-03-23 00:24:24,965 [wrapper] cleanup supervisor_pilot  658570 378990
[2026-03-23 01:24:25] 2026-03-23 00:24:24,967 [wrapper] Test setup, not cleaning
[2026-03-23 01:24:25] 2026-03-23 00:24:24,970 [wrapper] apfmon messages muted
[2026-03-23 01:24:25] 2026-03-23 00:24:24,972 [wrapper] ==== wrapper stdout END ====
[2026-03-23 01:24:25] 2026-03-23 00:24:24,974 [wrapper] ==== wrapper stderr END ====
[2026-03-23 01:24:25]  *** Error codes and diagnostics ***
[2026-03-23 01:24:25]     "exeErrorCode": 0,
[2026-03-23 01:24:25]     "exeErrorDiag": "",
[2026-03-23 01:24:25]     "pilotErrorCode": 0,
[2026-03-23 01:24:25]     "pilotErrorDiag": "",
[2026-03-23 01:24:25]  *** Listing of results directory ***
[2026-03-23 01:24:25] total 489600
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc    585013 Mar 22 20:50 pilot3.tar.gz
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc      5111 Mar 22 21:13 queuedata.json
[2026-03-23 01:24:25] -rwx------. 1 boinc boinc     36322 Mar 22 21:13 runpilot2-wrapper.sh
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc       100 Mar 23 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 01:24:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar 23 00:19 run_atlas
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc       105 Mar 23 00:19 job.xml
[2026-03-23 01:24:25] drwxrwx--x. 2 boinc boinc      4096 Mar 23 00:20 shared
[2026-03-23 01:24:25] -rw-r--r--. 2 boinc boinc    597552 Mar 23 00:20 input.tar.gz
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc      6710 Mar 23 00:20 init_data.xml
[2026-03-23 01:24:25] -rw-r--r--. 2 boinc boinc 247318810 Mar 23 00:20 EVNT.49134557._000011.pool.root.1
[2026-03-23 01:24:25] -rw-r--r--. 2 boinc boinc     15845 Mar 23 00:20 start_atlas.sh
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc         0 Mar 23 00:20 boinc_lockfile
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc      2612 Mar 23 00:20 pandaJob.out
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc   1010663 Mar 23 00:20 agis_schedconf.cvmfs.json
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc   1511579 Mar 23 00:20 agis_ddmendpoints.agis.ALL.json
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc       443 Mar 23 00:20 workernode_map.json
[2026-03-23 01:24:25] drwx------. 5 boinc boinc      4096 Mar 23 00:20 pilot3
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc 248161055 Mar 23 01:22 HITS.49181154._000858.pool.root.1
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc       529 Mar 23 01:23 boinc_task_state.xml
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc      1043 Mar 23 01:23 memory_monitor_summary.json
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc    386112 Mar 23 01:23 log.49181154._000858.job.log.tgz.1
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc      6349 Mar 23 01:23 heartbeat.json
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc        95 Mar 23 01:23 pilot_heartbeat.json
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc      8192 Mar 23 01:24 boinc_mmap_file
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc        27 Mar 23 01:24 wrapper_checkpoint.txt
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc      4902 Mar 23 01:24 pilotlog.txt
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc    574567 Mar 23 01:24 log.49181154._000858.job.log.1
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc       357 Mar 23 01:24 output.list
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc       620 Mar 23 01:24 runtime_log
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc    983040 Mar 23 01:24 result.tar.gz
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc       663 Mar 23 01:24 wBRKDmNMeO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6g6LDmfT4Utm.diag
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc      9223 Mar 23 01:24 runtime_log.err
[2026-03-23 01:24:25] -rw-r--r--. 1 boinc boinc     21244 Mar 23 01:24 stderr.txt
[2026-03-23 01:24:25] HITS file was successfully produced:
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc 248161055 Mar 23 01:22 shared/HITS.pool.root.1
[2026-03-23 01:24:25]  *** Contents of shared directory: ***
[2026-03-23 01:24:25] total 485440
[2026-03-23 01:24:25] -rw-r--r--. 2 boinc boinc    597552 Mar 23 00:20 input.tar.gz
[2026-03-23 01:24:25] -rw-r--r--. 2 boinc boinc 247318810 Mar 23 00:20 ATLAS.root_0
[2026-03-23 01:24:25] -rw-r--r--. 2 boinc boinc     15845 Mar 23 00:20 start_atlas.sh
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc 248161055 Mar 23 01:22 HITS.pool.root.1
[2026-03-23 01:24:25] -rw-------. 1 boinc boinc    983040 Mar 23 01:24 result.tar.gz
01:24:26 (367024): run_atlas exited; CPU time 41790.694892
01:24:26 (367024): called boinc_finish(0)

</stderr_txt>
]]>

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