Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:53:54 (18879): wrapper (7.7.26015): starting
22:53:54 (18879): wrapper: running run_atlas (--nthreads 8)
[2026-03-23 22:53:54] Arguments: --nthreads 8
[2026-03-23 22:53:54] Threads: 8
[2026-03-23 22:53:54] Checking for CVMFS
[2026-03-23 22:53:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-23 22:53:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-23 22:53:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-23 22:54:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-23 22:54:00] 2.11.2.0 3545 141098 139436 157618 2 54 23282532 25165824 4520 130560 155 47801638 99.831 37234982 1196 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-23 22:54:00] CVMFS is ok
[2026-03-23 22:54:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 22:54:00] Checking for apptainer binary...
[2026-03-23 22:54:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-23 22:54:00] Running /usr/bin/apptainer --version
[2026-03-23 22:54:00] apptainer version 1.3.2-1.el7
[2026-03-23 22:54:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 22:54:05] cg-vwn466.simple-grid.lan
[2026-03-23 22:54:05] apptainer works
[2026-03-23 22:54:05] Set ATHENA_PROC_NUMBER=8
[2026-03-23 22:54:05] Set ATHENA_CORE_NUMBER=8
[2026-03-23 22:54:05] Starting ATLAS job with PandaID=7062355662
[2026-03-23 22:54:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 08:38:14]  *** The last 200 lines of the pilot log: ***
[2026-03-24 08:38:14] 2026-03-24 07:37:07,249 | INFO     | total number of processed events: 400 (read)
[2026-03-24 08:38:14] 2026-03-24 07:37:07,251 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7062355662/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 08:38:14] 2026-03-24 07:37:07,252 | INFO     | extracted standard info from prmon json
[2026-03-24 08:38:14] 2026-03-24 07:37:07,252 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 08:38:14] 2026-03-24 07:37:07,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 08:38:14] 2026-03-24 07:37:07,252 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 08:38:14] 2026-03-24 07:37:07,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 08:38:14] 2026-03-24 07:37:07,262 | INFO     | fitting pss+swap vs Time
[2026-03-24 08:38:14] 2026-03-24 07:37:07,266 | INFO     | sum of square deviations: 55630680265.0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,280 | INFO     | sum of deviations: 34643449521.99999
[2026-03-24 08:38:14] 2026-03-24 07:37:07,280 | INFO     | mean x: 1774320590.5
[2026-03-24 08:38:14] 2026-03-24 07:37:07,280 | INFO     | mean y: 2524671.485815603
[2026-03-24 08:38:14] 2026-03-24 07:37:07,280 | INFO     | intersect: -1102415723.2751825
[2026-03-24 08:38:14] 2026-03-24 07:37:07,281 | INFO     | chi2: 7.842507465865071
[2026-03-24 08:38:14] 2026-03-24 07:37:07,282 | INFO     | sum of square deviations: 54164215560.0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,290 | INFO     | sum of deviations: 72607394942.99992
[2026-03-24 08:38:14] 2026-03-24 07:37:07,290 | INFO     | mean x: 1774320438.0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,290 | INFO     | mean y: 2528591.080500894
[2026-03-24 08:38:14] 2026-03-24 07:37:07,291 | INFO     | intersect: -2375956603.717409
[2026-03-24 08:38:14] 2026-03-24 07:37:07,291 | INFO     | chi2: 7.097847128120277
[2026-03-24 08:38:14] 2026-03-24 07:37:07,291 | INFO     | current chi2=7.097847128120277 (change=9.495181751320837 %)
[2026-03-24 08:38:14] 2026-03-24 07:37:07,292 | INFO     | right removable region: 558
[2026-03-24 08:38:14] 2026-03-24 07:37:07,292 | INFO     | sum of square deviations: 54164215560.0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,313 | INFO     | sum of deviations: -168099665969.00003
[2026-03-24 08:38:14] 2026-03-24 07:37:07,314 | INFO     | mean x: 1774320743.0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,314 | INFO     | mean y: 2545747.9892665474
[2026-03-24 08:38:14] 2026-03-24 07:37:07,314 | INFO     | intersect: 5509183684.797742
[2026-03-24 08:38:14] 2026-03-24 07:37:07,315 | INFO     | chi2: 3.1780498169474463
[2026-03-24 08:38:14] 2026-03-24 07:37:07,315 | INFO     | current chi2=3.1780498169474463 (change=59.47661088267909 %)
[2026-03-24 08:38:14] 2026-03-24 07:37:07,316 | INFO     | sum of square deviations: 52723751342.5
[2026-03-24 08:38:14] 2026-03-24 07:37:07,330 | INFO     | sum of deviations: -285167708670.0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,331 | INFO     | mean x: 1774320895.5
[2026-03-24 08:38:14] 2026-03-24 07:37:07,331 | INFO     | mean y: 2558115.2310469314
[2026-03-24 08:38:14] 2026-03-24 07:37:07,331 | INFO     | intersect: 9599352943.583364
[2026-03-24 08:38:14] 2026-03-24 07:37:07,332 | INFO     | chi2: 1.348816533392311
[2026-03-24 08:38:14] 2026-03-24 07:37:07,332 | INFO     | current chi2=1.348816533392311 (change=57.55835776394893 %)
[2026-03-24 08:38:14] 2026-03-24 07:37:07,333 | INFO     | sum of square deviations: 51309055050.0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,341 | INFO     | sum of deviations: -299400164742.0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,341 | INFO     | mean x: 1774321048.0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,341 | INFO     | mean y: 2559647.087431694
[2026-03-24 08:38:14] 2026-03-24 07:37:07,341 | INFO     | intersect: 10356132005.002022
[2026-03-24 08:38:14] 2026-03-24 07:37:07,342 | INFO     | chi2: 1.297239818629782
[2026-03-24 08:38:14] 2026-03-24 07:37:07,342 | INFO     | current chi2=1.297239818629782 (change=3.823849536661012 %)
[2026-03-24 08:38:14] 2026-03-24 07:37:07,342 | INFO     | left removable region: 30
[2026-03-24 08:38:14] 2026-03-24 07:37:07,343 | INFO     | sum of square deviations: 45643467892.0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,353 | INFO     | sum of deviations: -228018942083.99997
[2026-03-24 08:38:14] 2026-03-24 07:37:07,354 | INFO     | mean x: 1774321322.5
[2026-03-24 08:38:14] 2026-03-24 07:37:07,354 | INFO     | mean y: 2560472.9545454546
[2026-03-24 08:38:14] 2026-03-24 07:37:07,354 | INFO     | intersect: 8866454685.174229
[2026-03-24 08:38:14] 2026-03-24 07:37:07,355 | INFO     | chi2: 0.4858363978411116
[2026-03-24 08:38:14] 2026-03-24 07:37:07,355 | INFO     | current memory leak: -5.00 B/s (using 528 data points, chi2=0.49)
[2026-03-24 08:38:14] 2026-03-24 07:37:07,356 | INFO     | could have reported an average CPU frequency of 2250 MHz (23 samples)
[2026-03-24 08:38:14] 2026-03-24 07:37:07,356 | INFO     | ..............................
[2026-03-24 08:38:14] 2026-03-24 07:37:07,356 | INFO     | . Timing measurements:
[2026-03-24 08:38:14] 2026-03-24 07:37:07,356 | INFO     | . get job = 0 s
[2026-03-24 08:38:14] 2026-03-24 07:37:07,356 | INFO     | . initial setup = 103 s
[2026-03-24 08:38:14] 2026-03-24 07:37:07,356 | INFO     | . payload setup = 154 s
[2026-03-24 08:38:14] 2026-03-24 07:37:07,356 | INFO     | . stage-in = 0 s
[2026-03-24 08:38:14] 2026-03-24 07:37:07,356 | INFO     | . payload execution = 34513 s
[2026-03-24 08:38:14] 2026-03-24 07:37:07,356 | INFO     | . stage-out = 4 s
[2026-03-24 08:38:14] 2026-03-24 07:37:07,356 | INFO     | . log creation = 1 s
[2026-03-24 08:38:14] 2026-03-24 07:37:07,357 | INFO     | ..............................
[2026-03-24 08:38:14] 2026-03-24 07:37:07,495 | INFO     | 
[2026-03-24 08:38:14] 2026-03-24 07:37:07,495 | INFO     | job summary report
[2026-03-24 08:38:14] 2026-03-24 07:37:07,495 | INFO     | --------------------------------------------------
[2026-03-24 08:38:14] 2026-03-24 07:37:07,495 | INFO     | PanDA job id: 7062355662
[2026-03-24 08:38:14] 2026-03-24 07:37:07,495 | INFO     | task id: 49181154
[2026-03-24 08:38:14] 2026-03-24 07:37:07,495 | INFO     | errors: (none)
[2026-03-24 08:38:14] 2026-03-24 07:37:07,495 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 08:38:14] 2026-03-24 07:37:07,495 | INFO     | pilot state: finished 
[2026-03-24 08:38:14] 2026-03-24 07:37:07,495 | INFO     | transexitcode: 0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,496 | INFO     | exeerrorcode: 0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,496 | INFO     | exeerrordiag: 
[2026-03-24 08:38:14] 2026-03-24 07:37:07,496 | INFO     | exitcode: 0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,496 | INFO     | exitmsg: OK
[2026-03-24 08:38:14] 2026-03-24 07:37:07,496 | INFO     | cpuconsumptiontime: 137287 s
[2026-03-24 08:38:14] 2026-03-24 07:37:07,496 | INFO     | nevents: 400
[2026-03-24 08:38:14] 2026-03-24 07:37:07,496 | INFO     | neventsw: 0
[2026-03-24 08:38:14] 2026-03-24 07:37:07,496 | INFO     | pid: 27523
[2026-03-24 08:38:14] 2026-03-24 07:37:07,496 | INFO     | pgrp: 27523
[2026-03-24 08:38:14] 2026-03-24 07:37:07,496 | INFO     | corecount: 8
[2026-03-24 08:38:14] 2026-03-24 07:37:07,497 | INFO     | event service: False
[2026-03-24 08:38:14] 2026-03-24 07:37:07,497 | INFO     | sizes: {0: 2279156, 1: 2279841, 2: 2280302, 34672: 2320180, 34673: 2320179, 34677: 2329417, 34680: 2329555}
[2026-03-24 08:38:14] 2026-03-24 07:37:07,497 | INFO     | --------------------------------------------------
[2026-03-24 08:38:14] 2026-03-24 07:37:07,497 | INFO     | 
[2026-03-24 08:38:14] 2026-03-24 07:37:07,497 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-24 08:38:14] 2026-03-24 07:37:07,792 | INFO     | PID=23011 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-24 08:38:14] 2026-03-24 07:37:07,792 | INFO     | .. there are 9 such processes running
[2026-03-24 08:38:14] 2026-03-24 07:37:08,061 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,061 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,061 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,061 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,063 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 08:38:14] 2026-03-24 07:37:08,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,063 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 08:38:14] 2026-03-24 07:37:08,063 | INFO     | job 7062355662 has completed (purged errors)
[2026-03-24 08:38:14] 2026-03-24 07:37:08,063 | INFO     | overall cleanup function is called
[2026-03-24 08:38:14] 2026-03-24 07:37:09,071 | INFO     | --- collectZombieJob: --- 10, [27523]
[2026-03-24 08:38:14] 2026-03-24 07:37:09,072 | INFO     | zombie collector waiting for pid 27523
[2026-03-24 08:38:14] 2026-03-24 07:37:09,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 08:38:14] 2026-03-24 07:37:09,072 | INFO     | collected zombie processes
[2026-03-24 08:38:14] 2026-03-24 07:37:09,072 | INFO     | will attempt to kill all subprocesses of pid=27523
[2026-03-24 08:38:14] 2026-03-24 07:37:09,195 | INFO     | process IDs to be killed: [27523] (in reverse order)
[2026-03-24 08:38:14] 2026-03-24 07:37:09,936 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 08:38:14] 2026-03-24 07:37:09,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 08:38:14] 2026-03-24 07:37:09,939 | INFO     | did not find any defunct processes belonging to 27523
[2026-03-24 08:38:14] 2026-03-24 07:37:09,942 | INFO     | did not find any defunct processes belonging to 27523
[2026-03-24 08:38:14] 2026-03-24 07:37:09,942 | INFO     | ready for new job
[2026-03-24 08:38:14] 2026-03-24 07:37:09,942 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 08:38:14] 2026-03-24 07:37:09,945 | INFO     | **************************************
[2026-03-24 08:38:14] 2026-03-24 07:37:09,945 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 08:38:14] 2026-03-24 07:37:09,946 | INFO     | **************************************
[2026-03-24 08:38:14] 2026-03-24 07:37:09,946 | INFO     | 
[2026-03-24 08:38:14] 2026-03-24 07:37:09,946 | INFO     | pilot is running in a VM
[2026-03-24 08:38:14] 2026-03-24 07:37:09,946 | INFO     | architecture information:
[2026-03-24 08:38:14] 2026-03-24 07:37:09,953 | INFO     | executing command: cat /etc/os-release
[2026-03-24 08:38:14] 2026-03-24 07:37:10,089 | INFO     | cat /etc/os-release:
[2026-03-24 08:38:14] NAME="CentOS Linux"
[2026-03-24 08:38:14] VERSION="7 (Core)"
[2026-03-24 08:38:14] ID="centos"
[2026-03-24 08:38:14] ID_LIKE="rhel fedora"
[2026-03-24 08:38:14] VERSION_ID="7"
[2026-03-24 08:38:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 08:38:14] ANSI_COLOR="0;31"
[2026-03-24 08:38:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 08:38:14] HOME_URL="https://www.centos.org/"
[2026-03-24 08:38:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 08:38:14] 
[2026-03-24 08:38:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 08:38:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 08:38:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 08:38:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 08:38:14] 
[2026-03-24 08:38:14] 2026-03-24 07:37:10,089 | INFO     | **************************************
[2026-03-24 08:38:14] 2026-03-24 07:37:10,592 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-24 08:38:14] 2026-03-24 07:37:10,832 | INFO     | sufficient remaining disk space (494956183552 B)
[2026-03-24 08:38:14] 2026-03-24 07:37:10,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 08:38:14] 2026-03-24 07:37:10,833 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 08:38:14] 2026-03-24 07:37:10,833 | INFO     | update_server=False
[2026-03-24 08:38:14] 2026-03-24 07:37:10,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 08:38:14] 2026-03-24 07:37:10,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 08:38:14] 2026-03-24 07:37:11,122 | INFO     | all data control threads have been joined
[2026-03-24 08:38:14] 2026-03-24 07:37:11,236 | INFO     | all payload control threads have been joined
[2026-03-24 08:38:14] 2026-03-24 07:37:11,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 08:38:14] 2026-03-24 07:37:11,330 | INFO     | aborting loop
[2026-03-24 08:38:14] 2026-03-24 07:37:11,483 | INFO     | all job control threads have been joined
[2026-03-24 08:38:14] 2026-03-24 07:37:11,838 | INFO     | [job] retrieve thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:12,107 | INFO     | [job] validate thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:12,118 | INFO     | [data] copytool_in thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:12,128 | INFO     | [data] control thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:12,180 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 08:38:14] 2026-03-24 07:37:12,184 | INFO     | [payload] validate_post thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:12,242 | INFO     | [payload] control thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:12,335 | INFO     | [job] job monitor thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:12,489 | INFO     | [job] control thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:12,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 08:38:14] 2026-03-24 07:37:12,805 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:12,828 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:12,848 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:13,017 | INFO     | [payload] failed_post thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:13,289 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:13,518 | INFO     | [job] queue monitor thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:14,187 | INFO     | [data] copytool_out thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:14,845 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 08:38:14] 2026-03-24 07:37:40,031 | INFO     | PID=23011 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-24 08:38:14] 2026-03-24 07:37:40,031 | INFO     | .. there are 9 such processes running
[2026-03-24 08:38:14] 2026-03-24 07:37:40,031 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 08:38:14] 2026-03-24 07:37:40,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 08:38:14] 2026-03-24 07:37:40,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 08:38:14] 2026-03-24 07:38:04,655 | INFO     | [monitor] cgroup control has ended
[2026-03-24 08:38:14] 2026-03-24 07:38:04,681 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193213347648)>', '<ExcThread(monitor, started 140192547591936)>']
[2026-03-24 08:38:14] 2026-03-24 07:38:05,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 08:38:14] 2026-03-24 07:38:05,178 | INFO     | [monitor] control thread has ended
[2026-03-24 08:38:14] 2026-03-24 07:38:09,707 | INFO     | all workflow threads have been joined
[2026-03-24 08:38:14] 2026-03-24 07:38:09,708 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 08:38:14] 2026-03-24 07:38:09,708 | INFO     | traces error code: 0
[2026-03-24 08:38:14] 2026-03-24 07:38:09,708 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 08:38:14] 2026-03-24 07:38:10,149 [wrapper] ==== pilot stdout END ====
[2026-03-24 08:38:14] 2026-03-24 07:38:10,203 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 08:38:14] 2026-03-24 07:38:10,308 [wrapper] pilotpid: 23011
[2026-03-24 08:38:14] 2026-03-24 07:38:10,411 [wrapper] Pilot exit status: 0
[2026-03-24 08:38:14] 2026-03-24 07:38:10,934 [wrapper] pandaids: 7062355662
[2026-03-24 08:38:14] 2026-03-24 07:38:11,816 [wrapper] cleanup supervisor_pilot  7397 23012
[2026-03-24 08:38:14] 2026-03-24 07:38:11,871 [wrapper] Test setup, not cleaning
[2026-03-24 08:38:14] 2026-03-24 07:38:11,912 [wrapper] apfmon messages muted
[2026-03-24 08:38:14] 2026-03-24 07:38:11,937 [wrapper] ==== wrapper stdout END ====
[2026-03-24 08:38:14] 2026-03-24 07:38:11,962 [wrapper] ==== wrapper stderr END ====
[2026-03-24 08:38:14]  *** Error codes and diagnostics ***
[2026-03-24 08:38:14]     "exeErrorCode": 0,
[2026-03-24 08:38:14]     "exeErrorDiag": "",
[2026-03-24 08:38:14]     "pilotErrorCode": 0,
[2026-03-24 08:38:14]     "pilotErrorDiag": "",
[2026-03-24 08:38:14]  *** Listing of results directory ***
[2026-03-24 08:38:14] total 501016
[2026-03-24 08:38:14] -rwx------. 1 boinc boinc     36322 Mar 22 23:33 runpilot2-wrapper.sh
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc    585013 Mar 22 23:34 pilot3.tar.gz
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc      5111 Mar 22 23:36 queuedata.json
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc       100 Mar 23 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 08:38:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 23 22:53 run_atlas
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc       105 Mar 23 22:53 job.xml
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc      6392 Mar 23 22:53 init_data.xml
[2026-03-24 08:38:14] -rw-r--r--. 2 boinc boinc 247866378 Mar 23 22:53 EVNT.49134557._000015.pool.root.1
[2026-03-24 08:38:14] -rw-r--r--. 2 boinc boinc     15845 Mar 23 22:53 start_atlas.sh
[2026-03-24 08:38:14] drwxrwx--x. 2 boinc boinc        68 Mar 23 22:53 shared
[2026-03-24 08:38:14] -rw-r--r--. 2 boinc boinc    597552 Mar 23 22:53 input.tar.gz
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc         0 Mar 23 22:53 boinc_lockfile
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc      2612 Mar 23 22:54 pandaJob.out
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc       413 Mar 23 22:58 workernode_map.json
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc   1010851 Mar 23 22:59 agis_schedconf.cvmfs.json
[2026-03-24 08:38:14] drwx------. 5 boinc boinc      4096 Mar 23 22:59 pilot3
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc 250182061 Mar 24 08:35 HITS.49181154._001133.pool.root.1
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc       531 Mar 24 08:36 boinc_task_state.xml
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc      1013 Mar 24 08:36 memory_monitor_summary.json
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc   1511579 Mar 24 08:37 agis_ddmendpoints.agis.ALL.json
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc        95 Mar 24 08:37 pilot_heartbeat.json
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc    743021 Mar 24 08:37 log.49181154._001133.job.log.tgz.1
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc      6311 Mar 24 08:37 heartbeat.json
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc      8192 Mar 24 08:37 boinc_mmap_file
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc        29 Mar 24 08:37 wrapper_checkpoint.txt
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc      4880 Mar 24 08:38 pilotlog.txt
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc   4788479 Mar 24 08:38 log.49181154._001133.job.log.1
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc       357 Mar 24 08:38 output.list
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc       620 Mar 24 08:38 runtime_log
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc   5550080 Mar 24 08:38 result.tar.gz
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc       658 Mar 24 08:38 ZndLDmKXgO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLK7LDmmBcmZn.diag
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc      8816 Mar 24 08:38 runtime_log.err
[2026-03-24 08:38:14] -rw-r--r--. 1 boinc boinc     20806 Mar 24 08:38 stderr.txt
[2026-03-24 08:38:14] HITS file was successfully produced:
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc 250182061 Mar 24 08:35 shared/HITS.pool.root.1
[2026-03-24 08:38:14]  *** Contents of shared directory: ***
[2026-03-24 08:38:14] total 492400
[2026-03-24 08:38:14] -rw-r--r--. 2 boinc boinc 247866378 Mar 23 22:53 ATLAS.root_0
[2026-03-24 08:38:14] -rw-r--r--. 2 boinc boinc     15845 Mar 23 22:53 start_atlas.sh
[2026-03-24 08:38:14] -rw-r--r--. 2 boinc boinc    597552 Mar 23 22:53 input.tar.gz
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc 250182061 Mar 24 08:35 HITS.pool.root.1
[2026-03-24 08:38:14] -rw-------. 1 boinc boinc   5550080 Mar 24 08:38 result.tar.gz
08:38:15 (18879): run_atlas exited; CPU time 137792.131081
08:38:15 (18879): called boinc_finish(0)

</stderr_txt>
]]>

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