Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:04:29 (485244): wrapper (7.7.26015): starting
19:04:29 (485244): wrapper: running run_atlas (--nthreads 12)
[2026-03-23 19:04:29] Arguments: --nthreads 12
[2026-03-23 19:04:29] Threads: 12
[2026-03-23 19:04:29] Checking for CVMFS
[2026-03-23 19:04:29] No cvmfs_config command found, will try listing directly
[2026-03-23 19:04:29] CVMFS is ok
[2026-03-23 19:04:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-23 19:04:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-23 19:04:29] Further information can be found at the LHC@home message board.
[2026-03-23 19:04:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-23 19:04:29] Checking for apptainer binary...
[2026-03-23 19:04:29] which: no apptainer in ((null))
[2026-03-23 19:04:29] apptainer is not installed, using version from CVMFS
[2026-03-23 19:04:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-23 19:04:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-23 19:04:30] apptainer works
[2026-03-23 19:04:30] Set ATHENA_PROC_NUMBER=12
[2026-03-23 19:04:30] Set ATHENA_CORE_NUMBER=12
[2026-03-23 19:04:30] Starting ATLAS job with PandaID=7065225752
[2026-03-23 19:04:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-23 19:36:00]  *** The last 200 lines of the pilot log: ***
[2026-03-23 19:36:00]  protocol_id=None
[2026-03-23 19:36:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-23 19:36:00]  replicas=None
[2026-03-23 19:36:00]  scope=mc23_13p6TeV
[2026-03-23 19:36:00]  status=None
[2026-03-23 19:36:00]  status_code=0
[2026-03-23 19:36:00]  storage_token=
[2026-03-23 19:36:00]  surl=/var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7065225752/log.48958593._001397.job.log.tgz.1
[2026-03-23 19:36:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/65/log.48958593._001397.job.log.tgz.1
[2026-03-23 19:36:00]  workdir=None
[2026-03-23 19:36:00] ]
[2026-03-23 19:36:00] 2026-03-23 18:35:22,913 | INFO     | transferring file log.48958593._001397.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7065225752/log.48958593._001397.job.log.tgz.1 to /var/lib/
[2026-03-23 19:36:00] 2026-03-23 18:35:22,914 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7065225752/log.48958593._001397.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/1/
[2026-03-23 19:36:00] 2026-03-23 18:35:22,931 | INFO     | adding to output.list: log.48958593._001397.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/65/log.48958593._001397.job.log.tg
[2026-03-23 19:36:00] 2026-03-23 18:35:22,932 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-23 19:36:00] 2026-03-23 18:35:22,932 | INFO     | summary of transferred files:
[2026-03-23 19:36:00] 2026-03-23 18:35:22,932 | INFO     |  -- lfn=log.48958593._001397.job.log.tgz.1, status_code=0, status=transferred
[2026-03-23 19:36:00] 2026-03-23 18:35:22,932 | INFO     | stage-out finished correctly
[2026-03-23 19:36:00] 2026-03-23 18:35:23,974 | WARNING  | process 500127 can no longer be monitored (due to stat problems) - aborting
[2026-03-23 19:36:00] 2026-03-23 18:35:23,974 | INFO     | using path: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7065225752/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 19:36:00] 2026-03-23 18:35:23,977 | INFO     | reaping zombies for max 20 seconds
[2026-03-23 19:36:00] 2026-03-23 18:35:23,986 | INFO     | checking for looping job (in state=finished)
[2026-03-23 19:36:00] 2026-03-23 18:35:23,987 | INFO     | using looping job limit: 7200 s
[2026-03-23 19:36:00] 2026-03-23 18:35:24,350 | INFO     | number of running child processes to parent process 500127: 1
[2026-03-23 19:36:00] 2026-03-23 18:35:24,350 | INFO     | maximum number of monitored processes: 6
[2026-03-23 19:36:00] 2026-03-23 18:35:24,651 | INFO     | time since job start (1843s) is within the limit (345600.0s)
[2026-03-23 19:36:00] 2026-03-23 18:35:25,373 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-23 19:36:00] 2026-03-23 18:35:26,252 | INFO     | job 7065225752 has state=finished
[2026-03-23 19:36:00] 2026-03-23 18:35:26,252 | INFO     | preparing for final server update for job 7065225752 in state='finished'
[2026-03-23 19:36:00] 2026-03-23 18:35:26,252 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7065225752/jobReport.json
[2026-03-23 19:36:00] 2026-03-23 18:35:26,254 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/1/workernode_map.json
[2026-03-23 19:36:00] 2026-03-23 18:35:26,254 | INFO     | this job has now completed (state=finished)
[2026-03-23 19:36:00] 2026-03-23 18:35:26,254 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-23 19:36:00] 2026-03-23 18:35:26,254 | INFO     | log transfer has been attempted: DONE
[2026-03-23 19:36:00] 2026-03-23 18:35:26,254 | INFO     | job 7065225752 has finished - writing final server update
[2026-03-23 19:36:00] 2026-03-23 18:35:26,254 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2334779/.job.ad'
[2026-03-23 19:36:00] 2026-03-23 18:35:26,254 | INFO     | total number of processed events: 400 (read)
[2026-03-23 19:36:00] 2026-03-23 18:35:26,272 | INFO     | using path: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7065225752/memory_monitor_summary.json (trf name=prmon)
[2026-03-23 19:36:00] 2026-03-23 18:35:26,272 | INFO     | extracted standard info from prmon json
[2026-03-23 19:36:00] 2026-03-23 18:35:26,272 | INFO     | extracted standard memory fields from prmon json
[2026-03-23 19:36:00] 2026-03-23 18:35:26,272 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-23 19:36:00] 2026-03-23 18:35:26,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-23 19:36:00] 2026-03-23 18:35:26,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-23 19:36:00] 2026-03-23 18:35:26,273 | INFO     | fitting pss+swap vs Time
[2026-03-23 19:36:00] 2026-03-23 18:35:26,273 | INFO     | sum of square deviations: 3765652.0
[2026-03-23 19:36:00] 2026-03-23 18:35:26,273 | INFO     | sum of deviations: 4905620.0
[2026-03-23 19:36:00] 2026-03-23 18:35:26,273 | INFO     | mean x: 1774290078.0
[2026-03-23 19:36:00] 2026-03-23 18:35:26,273 | INFO     | mean y: 2703763.652173913
[2026-03-23 19:36:00] 2026-03-23 18:35:26,273 | INFO     | intersect: -2308713460.360656
[2026-03-23 19:36:00] 2026-03-23 18:35:26,273 | INFO     | chi2: 0.000242596218558652
[2026-03-23 19:36:00] 2026-03-23 18:35:26,273 | INFO     | current memory leak: 1.30 B/s (using 23 data points, chi2=0.00)
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | could have reported an average CPU frequency of 3597 MHz (5 samples)
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | ..............................
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | . Timing measurements:
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | . get job = 0 s
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | . initial setup = 4 s
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | . payload setup = 6 s
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | . stage-in = 0 s
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | . payload execution = 1820 s
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | . stage-out = 0 s
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | . log creation = 0 s
[2026-03-23 19:36:00] 2026-03-23 18:35:26,274 | INFO     | ..............................
[2026-03-23 19:36:00] 2026-03-23 18:35:26,657 | INFO     | time since job start (1845s) is within the limit (345600.0s)
[2026-03-23 19:36:00] 2026-03-23 18:35:26,657 | INFO     | 1849s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | 
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | job summary report
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | --------------------------------------------------
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | PanDA job id: 7065225752
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | task id: 48958593
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | errors: (none)
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | pilot state: finished 
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | transexitcode: 0
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | exeerrorcode: 0
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | exeerrordiag: 
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | exitcode: 0
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | exitmsg: OK
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | cpuconsumptiontime: 19163 s
[2026-03-23 19:36:00] 2026-03-23 18:35:26,682 | INFO     | nevents: 400
[2026-03-23 19:36:00] 2026-03-23 18:35:26,683 | INFO     | neventsw: 0
[2026-03-23 19:36:00] 2026-03-23 18:35:26,683 | INFO     | pid: 500127
[2026-03-23 19:36:00] 2026-03-23 18:35:26,683 | INFO     | pgrp: 500127
[2026-03-23 19:36:00] 2026-03-23 18:35:26,683 | INFO     | corecount: 12
[2026-03-23 19:36:00] 2026-03-23 18:35:26,683 | INFO     | event service: False
[2026-03-23 19:36:00] 2026-03-23 18:35:26,683 | INFO     | sizes: {0: 2280025, 1: 2280287, 11: 2280315, 1830: 2305172, 1831: 2314194, 1833: 2314250, 1834: 2314604}
[2026-03-23 19:36:00] 2026-03-23 18:35:26,683 | INFO     | --------------------------------------------------
[2026-03-23 19:36:00] 2026-03-23 18:35:26,683 | INFO     | 
[2026-03-23 19:36:00] 2026-03-23 18:35:26,683 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/1
[2026-03-23 19:36:00] 2026-03-23 18:35:26,696 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,696 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,696 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | job 7065225752 has completed (purged errors)
[2026-03-23 19:36:00] 2026-03-23 18:35:26,697 | INFO     | overall cleanup function is called
[2026-03-23 19:36:00] 2026-03-23 18:35:27,704 | INFO     | --- collectZombieJob: --- 10, [500127]
[2026-03-23 19:36:00] 2026-03-23 18:35:27,704 | INFO     | zombie collector waiting for pid 500127
[2026-03-23 19:36:00] 2026-03-23 18:35:27,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-23 19:36:00] 2026-03-23 18:35:27,704 | INFO     | collected zombie processes
[2026-03-23 19:36:00] 2026-03-23 18:35:27,704 | INFO     | will attempt to kill all subprocesses of pid=500127
[2026-03-23 19:36:00] 2026-03-23 18:35:28,024 | INFO     | process IDs to be killed: [500127] (in reverse order)
[2026-03-23 19:36:00] 2026-03-23 18:35:28,170 | WARNING  | found no corresponding commands to process id(s)
[2026-03-23 19:36:00] 2026-03-23 18:35:28,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-23 19:36:00] 2026-03-23 18:35:28,195 | INFO     | did not find any defunct processes belonging to 500127
[2026-03-23 19:36:00] 2026-03-23 18:35:28,218 | INFO     | did not find any defunct processes belonging to 500127
[2026-03-23 19:36:00] 2026-03-23 18:35:28,218 | INFO     | ready for new job
[2026-03-23 19:36:00] 2026-03-23 18:35:28,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-23 19:36:00] 2026-03-23 18:35:28,219 | INFO     | **************************************
[2026-03-23 19:36:00] 2026-03-23 18:35:28,219 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-23 19:36:00] 2026-03-23 18:35:28,220 | INFO     | **************************************
[2026-03-23 19:36:00] 2026-03-23 18:35:28,220 | INFO     | 
[2026-03-23 19:36:00] 2026-03-23 18:35:28,225 | INFO     | architecture information:
[2026-03-23 19:36:00] 2026-03-23 18:35:28,225 | INFO     | executing command: cat /etc/os-release
[2026-03-23 19:36:00] 2026-03-23 18:35:28,237 | INFO     | cat /etc/os-release:
[2026-03-23 19:36:00] NAME="CentOS Linux"
[2026-03-23 19:36:00] VERSION="7 (Core)"
[2026-03-23 19:36:00] ID="centos"
[2026-03-23 19:36:00] ID_LIKE="rhel fedora"
[2026-03-23 19:36:00] VERSION_ID="7"
[2026-03-23 19:36:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-23 19:36:00] ANSI_COLOR="0;31"
[2026-03-23 19:36:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-23 19:36:00] HOME_URL="https://www.centos.org/"
[2026-03-23 19:36:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-23 19:36:00] 
[2026-03-23 19:36:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-23 19:36:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-23 19:36:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-23 19:36:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-23 19:36:00] 
[2026-03-23 19:36:00] 2026-03-23 18:35:28,238 | INFO     | **************************************
[2026-03-23 19:36:00] 2026-03-23 18:35:28,740 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/1
[2026-03-23 19:36:00] 2026-03-23 18:35:28,754 | INFO     | sufficient remaining disk space (20629684224 B)
[2026-03-23 19:36:00] 2026-03-23 18:35:28,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-23 19:36:00] 2026-03-23 18:35:28,754 | INFO     | current server update state: UPDATING_FINAL
[2026-03-23 19:36:00] 2026-03-23 18:35:28,754 | INFO     | update_server=False
[2026-03-23 19:36:00] 2026-03-23 18:35:28,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-23 19:36:00] 2026-03-23 18:35:28,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-23 19:36:00] 2026-03-23 18:35:28,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-23 19:36:00] 2026-03-23 18:35:28,755 | INFO     | aborting loop
[2026-03-23 19:36:00] 2026-03-23 18:35:29,207 | INFO     | all data control threads have been joined
[2026-03-23 19:36:00] 2026-03-23 18:35:29,307 | INFO     | all payload control threads have been joined
[2026-03-23 19:36:00] 2026-03-23 18:35:29,760 | INFO     | [job] retrieve thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:29,760 | INFO     | [job] job monitor thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:29,854 | INFO     | [payload] validate_post thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:30,212 | INFO     | [data] control thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:30,293 | INFO     | [payload] failed_post thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:30,311 | INFO     | all job control threads have been joined
[2026-03-23 19:36:00] 2026-03-23 18:35:30,312 | INFO     | [payload] control thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:30,761 | INFO     | [data] copytool_out thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:30,823 | INFO     | [job] validate thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:30,884 | INFO     | [job] create_data_payload thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:30,918 | INFO     | [payload] execute_payloads thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:30,944 | INFO     | [payload] validate_pre thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:31,176 | INFO     | [data] copytool_in thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:31,316 | INFO     | [job] control thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:31,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-23 19:36:00] 2026-03-23 18:35:31,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-23 19:36:00] 2026-03-23 18:35:32,339 | INFO     | [job] queue monitor thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:35,434 | INFO     | [data] queue_monitor thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:39,117 | INFO     | job.realtimelogging is not enabled
[2026-03-23 19:36:00] 2026-03-23 18:35:40,123 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-23 19:36:00] 2026-03-23 18:35:43,724 | INFO     | [monitor] cgroup control has ended
[2026-03-23 19:36:00] 2026-03-23 18:35:45,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23148173891392)>', '<ExcThread(monitor, started 23147930982144)>']
[2026-03-23 19:36:00] 2026-03-23 18:35:50,528 | INFO     | all workflow threads have been joined
[2026-03-23 19:36:00] 2026-03-23 18:35:50,531 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-23 19:36:00] 2026-03-23 18:35:50,531 | INFO     | traces error code: 0
[2026-03-23 19:36:00] 2026-03-23 18:35:50,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-23 19:36:00] 2026-03-23 18:36:00,159 | INFO     | PID=489870 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-23 19:36:00] 2026-03-23 18:36:00,159 | INFO     | .. there are 15 such processes running
[2026-03-23 19:36:00] 2026-03-23 18:36:00,159 | INFO     | found 0 job(s) in 20 queues
[2026-03-23 19:36:00] 2026-03-23 18:36:00,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-23 19:36:00] 2026-03-23 18:36:00,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-23 19:36:00] 2026-03-23 18:36:00,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-23 19:36:00] 2026-03-23 18:36:00,159 | INFO     | [monitor] control thread has ended
[2026-03-23 19:36:00] 2026-03-23 18:36:00,296 [wrapper] ==== pilot stdout END ====
[2026-03-23 19:36:00] 2026-03-23 18:36:00,299 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-23 19:36:00] 2026-03-23 18:36:00,301 [wrapper] pilotpid: 489870
[2026-03-23 19:36:00] 2026-03-23 18:36:00,302 [wrapper] Pilot exit status: 0
[2026-03-23 19:36:00] 2026-03-23 18:36:00,309 [wrapper] pandaids: 7065225752
[2026-03-23 19:36:00] 2026-03-23 18:36:00,407 [wrapper] cleanup supervisor_pilot  674632 489871
[2026-03-23 19:36:00] 2026-03-23 18:36:00,410 [wrapper] Test setup, not cleaning
[2026-03-23 19:36:00] 2026-03-23 18:36:00,411 [wrapper] apfmon messages muted
[2026-03-23 19:36:00] 2026-03-23 18:36:00,414 [wrapper] ==== wrapper stdout END ====
[2026-03-23 19:36:00] 2026-03-23 18:36:00,415 [wrapper] ==== wrapper stderr END ====
[2026-03-23 19:36:00]  *** Error codes and diagnostics ***
[2026-03-23 19:36:00]     "exeErrorCode": 0,
[2026-03-23 19:36:00]     "exeErrorDiag": "",
[2026-03-23 19:36:00]     "pilotErrorCode": 0,
[2026-03-23 19:36:00]     "pilotErrorDiag": "",
[2026-03-23 19:36:00]  *** Listing of results directory ***
[2026-03-23 19:36:00] total 437340
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc    585013 Mar 22 22:31 pilot3.tar.gz
[2026-03-23 19:36:00] -rwx------. 1 boinc boinc     36322 Mar 22 22:32 runpilot2-wrapper.sh
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc      5111 Mar 22 22:33 queuedata.json
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc       100 Mar 23 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-23 19:36:00] -rwxr-xr-x. 1 boinc boinc      7986 Mar 23 19:04 run_atlas
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc       105 Mar 23 19:04 job.xml
[2026-03-23 19:36:00] -rw-r--r--. 2 boinc boinc     15845 Mar 23 19:04 start_atlas.sh
[2026-03-23 19:36:00] drwxrwx--x. 2 boinc boinc      4096 Mar 23 19:04 shared
[2026-03-23 19:36:00] -rw-r--r--. 2 boinc boinc    597556 Mar 23 19:04 input.tar.gz
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc      6711 Mar 23 19:04 init_data.xml
[2026-03-23 19:36:00] -rw-r--r--. 2 boinc boinc 261534559 Mar 23 19:04 EVNT.48958591._000036.pool.root.1
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc         0 Mar 23 19:04 boinc_lockfile
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc      2617 Mar 23 19:04 pandaJob.out
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc   1010850 Mar 23 19:04 agis_schedconf.cvmfs.json
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc   1511579 Mar 23 19:04 agis_ddmendpoints.agis.ALL.json
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc       444 Mar 23 19:04 workernode_map.json
[2026-03-23 19:36:00] drwx------. 5 boinc boinc      4096 Mar 23 19:04 pilot3
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc 181069700 Mar 23 19:34 HITS.48958593._001397.pool.root.1
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc        95 Mar 23 19:35 pilot_heartbeat.json
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc      1027 Mar 23 19:35 memory_monitor_summary.json
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc       530 Mar 23 19:35 boinc_task_state.xml
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc    334709 Mar 23 19:35 log.48958593._001397.job.log.tgz.1
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc      6351 Mar 23 19:35 heartbeat.json
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc      8192 Mar 23 19:35 boinc_mmap_file
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc        27 Mar 23 19:35 wrapper_checkpoint.txt
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc       822 Mar 23 19:36 pilotlog.txt
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc    308317 Mar 23 19:36 log.48958593._001397.job.log.1
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc       357 Mar 23 19:36 output.list
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc       620 Mar 23 19:36 runtime_log
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc    665600 Mar 23 19:36 result.tar.gz
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc      9223 Mar 23 19:36 runtime_log.err
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc       662 Mar 23 19:36 dngKDmGafO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmFx6LDmnTQAam.diag
[2026-03-23 19:36:00] -rw-r--r--. 1 boinc boinc     21621 Mar 23 19:36 stderr.txt
[2026-03-23 19:36:00] HITS file was successfully produced:
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc 181069700 Mar 23 19:34 shared/HITS.pool.root.1
[2026-03-23 19:36:00]  *** Contents of shared directory: ***
[2026-03-23 19:36:00] total 433496
[2026-03-23 19:36:00] -rw-r--r--. 2 boinc boinc     15845 Mar 23 19:04 start_atlas.sh
[2026-03-23 19:36:00] -rw-r--r--. 2 boinc boinc    597556 Mar 23 19:04 input.tar.gz
[2026-03-23 19:36:00] -rw-r--r--. 2 boinc boinc 261534559 Mar 23 19:04 ATLAS.root_0
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc 181069700 Mar 23 19:34 HITS.pool.root.1
[2026-03-23 19:36:00] -rw-------. 1 boinc boinc    665600 Mar 23 19:36 result.tar.gz
19:36:01 (485244): run_atlas exited; CPU time 19210.617702
19:36:01 (485244): called boinc_finish(0)

</stderr_txt>
]]>

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