Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:35:06 (1837459): wrapper (7.7.26015): starting
01:35:06 (1837459): wrapper: running run_atlas (--nthreads 12)
[2026-03-24 01:35:06] Arguments: --nthreads 12
[2026-03-24 01:35:06] Threads: 12
[2026-03-24 01:35:06] Checking for CVMFS
[2026-03-24 01:35:06] No cvmfs_config command found, will try listing directly
[2026-03-24 01:35:06] CVMFS is ok
[2026-03-24 01:35:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 01:35:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 01:35:06] Further information can be found at the LHC@home message board.
[2026-03-24 01:35:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 01:35:06] Checking for apptainer binary...
[2026-03-24 01:35:06] which: no apptainer in ((null))
[2026-03-24 01:35:06] apptainer is not installed, using version from CVMFS
[2026-03-24 01:35:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 01:35:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-24 01:35:06] apptainer works
[2026-03-24 01:35:06] Set ATHENA_PROC_NUMBER=12
[2026-03-24 01:35:06] Set ATHENA_CORE_NUMBER=12
[2026-03-24 01:35:06] Starting ATLAS job with PandaID=7062258631
[2026-03-24 01:35:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 02:29:36]  *** The last 200 lines of the pilot log: ***
[2026-03-24 02:29:36]  guid=1c6f68b7-1f38-4b09-82f8-866690276ba6
[2026-03-24 02:29:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-24 02:29:36]  is_altstaged=None
[2026-03-24 02:29:36]  is_tar=False
[2026-03-24 02:29:36]  lfn=log.49282866._000035.job.log.tgz.1
[2026-03-24 02:29:36]  mtime=0
[2026-03-24 02:29:36]  protocol_id=None
[2026-03-24 02:29:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-24 02:29:36]  replicas=None
[2026-03-24 02:29:36]  scope=mc23_13p6TeV
[2026-03-24 02:29:36]  status=None
[2026-03-24 02:29:36]  status_code=0
[2026-03-24 02:29:36]  storage_token=
[2026-03-24 02:29:36]  surl=/var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062258631/log.49282866._000035.job.log.tgz.1
[2026-03-24 02:29:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/9f/log.49282866._000035.job.log.tgz.1
[2026-03-24 02:29:36]  workdir=None
[2026-03-24 02:29:36] ]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,232 | INFO     | transferring file log.49282866._000035.job.log.tgz.1 from /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062258631/log.49282866._000035.job.log.tgz.1 to /var/lib/
[2026-03-24 02:29:36] 2026-03-24 01:27:22,233 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062258631/log.49282866._000035.job.log.tgz.1 /var/lib/boinc/var/slot120/slots/2/
[2026-03-24 02:29:36] 2026-03-24 01:27:22,246 | INFO     | adding to output.list: log.49282866._000035.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/9f/log.49282866._000035.job.log.tg
[2026-03-24 02:29:36] 2026-03-24 01:27:22,246 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-24 02:29:36] 2026-03-24 01:27:22,246 | INFO     | summary of transferred files:
[2026-03-24 02:29:36] 2026-03-24 01:27:22,247 | INFO     |  -- lfn=log.49282866._000035.job.log.tgz.1, status_code=0, status=transferred
[2026-03-24 02:29:36] 2026-03-24 01:27:22,247 | INFO     | stage-out finished correctly
[2026-03-24 02:29:36] 2026-03-24 01:27:22,308 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-24 02:29:36] 2026-03-24 01:27:22,356 | INFO     | job 7062258631 has state=finished
[2026-03-24 02:29:36] 2026-03-24 01:27:22,356 | INFO     | preparing for final server update for job 7062258631 in state='finished'
[2026-03-24 02:29:36] 2026-03-24 01:27:22,357 | INFO     | reading metadata from: /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062258631/jobReport.json
[2026-03-24 02:29:36] 2026-03-24 01:27:22,358 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot120/slots/2/workernode_map.json
[2026-03-24 02:29:36] 2026-03-24 01:27:22,359 | INFO     | this job has now completed (state=finished)
[2026-03-24 02:29:36] 2026-03-24 01:27:22,359 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 02:29:36] 2026-03-24 01:27:22,359 | INFO     | log transfer has been attempted: DONE
[2026-03-24 02:29:36] 2026-03-24 01:27:22,359 | INFO     | job 7062258631 has finished - writing final server update
[2026-03-24 02:29:36] 2026-03-24 01:27:22,359 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1591888/.job.ad'
[2026-03-24 02:29:36] 2026-03-24 01:27:22,359 | INFO     | total number of processed events: 400 (read)
[2026-03-24 02:29:36] 2026-03-24 01:27:22,377 | INFO     | using path: /var/lib/boinc/var/slot120/slots/2/PanDA_Pilot-7062258631/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 02:29:36] 2026-03-24 01:27:22,377 | INFO     | extracted standard info from prmon json
[2026-03-24 02:29:36] 2026-03-24 01:27:22,377 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 02:29:36] 2026-03-24 01:27:22,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 02:29:36] 2026-03-24 01:27:22,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 02:29:36] 2026-03-24 01:27:22,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 02:29:36] 2026-03-24 01:27:22,378 | INFO     | fitting pss+swap vs Time
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | sum of square deviations: 26400495.0
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | sum of deviations: -773134831.5000001
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | mean x: 1774314157.5
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | mean y: 2764105.9318181816
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | intersect: 51963307920.99389
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | chi2: 0.0005506475397316191
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | current memory leak: -29.28 B/s (using 44 data points, chi2=0.00)
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | could have reported an average CPU frequency of 3600 MHz (5 samples)
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | ..............................
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | . Timing measurements:
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | . get job = 0 s
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | . initial setup = 4 s
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | . payload setup = 7 s
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | . stage-in = 0 s
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | . payload execution = 3100 s
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | . stage-out = 0 s
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | . log creation = 0 s
[2026-03-24 02:29:36] 2026-03-24 01:27:22,379 | INFO     | ..............................
[2026-03-24 02:29:36] 2026-03-24 01:27:22,427 | INFO     | 
[2026-03-24 02:29:36] 2026-03-24 01:27:22,427 | INFO     | job summary report
[2026-03-24 02:29:36] 2026-03-24 01:27:22,427 | INFO     | --------------------------------------------------
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | PanDA job id: 7062258631
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | task id: 49282866
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | errors: (none)
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | pilot state: finished 
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | transexitcode: 0
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | exeerrorcode: 0
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | exeerrordiag: 
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | exitcode: 0
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | exitmsg: OK
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | cpuconsumptiontime: 34489 s
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | nevents: 400
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | neventsw: 0
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | pid: 1848385
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | pgrp: 1848385
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | corecount: 12
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | event service: False
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | sizes: {0: 2279129, 1: 2280259, 11: 2280259, 3111: 2305723, 3113: 2314971}
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | --------------------------------------------------
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | 
[2026-03-24 02:29:36] 2026-03-24 01:27:22,428 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/2
[2026-03-24 02:29:36] 2026-03-24 01:27:22,443 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | job 7062258631 has completed (purged errors)
[2026-03-24 02:29:36] 2026-03-24 01:27:22,444 | INFO     | overall cleanup function is called
[2026-03-24 02:29:36] 2026-03-24 01:27:23,309 | WARNING  | process 1848385 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 02:29:36] 2026-03-24 01:27:23,451 | INFO     | --- collectZombieJob: --- 10, [1848385]
[2026-03-24 02:29:36] 2026-03-24 01:27:23,451 | INFO     | zombie collector waiting for pid 1848385
[2026-03-24 02:29:36] 2026-03-24 01:27:23,452 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 02:29:36] 2026-03-24 01:27:23,452 | INFO     | collected zombie processes
[2026-03-24 02:29:36] 2026-03-24 01:27:23,452 | INFO     | will attempt to kill all subprocesses of pid=1848385
[2026-03-24 02:29:36] 2026-03-24 01:27:23,924 | INFO     | using path: /var/lib/boinc/var/slot120/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 02:29:36] 2026-03-24 01:27:24,739 | INFO     | process IDs to be killed: [1848385] (in reverse order)
[2026-03-24 02:29:36] 2026-03-24 01:27:24,883 | INFO     | number of running child processes to parent process 1848385: 1
[2026-03-24 02:29:36] 2026-03-24 01:27:24,883 | INFO     | maximum number of monitored processes: 6
[2026-03-24 02:29:36] 2026-03-24 01:27:24,883 | INFO     | aborting job monitoring since job object (job id=7062258631) has expired
[2026-03-24 02:29:36] 2026-03-24 01:27:24,899 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 02:29:36] 2026-03-24 01:27:24,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 02:29:36] 2026-03-24 01:27:24,925 | INFO     | did not find any defunct processes belonging to 1848385
[2026-03-24 02:29:36] 2026-03-24 01:27:24,950 | INFO     | did not find any defunct processes belonging to 1848385
[2026-03-24 02:29:36] 2026-03-24 01:27:24,950 | INFO     | ready for new job
[2026-03-24 02:29:36] 2026-03-24 01:27:24,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 02:29:36] 2026-03-24 01:27:24,951 | INFO     | **************************************
[2026-03-24 02:29:36] 2026-03-24 01:27:24,951 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 02:29:36] 2026-03-24 01:27:24,951 | INFO     | **************************************
[2026-03-24 02:29:36] 2026-03-24 01:27:24,951 | INFO     | 
[2026-03-24 02:29:36] 2026-03-24 01:27:24,957 | INFO     | architecture information:
[2026-03-24 02:29:36] 2026-03-24 01:27:24,957 | INFO     | executing command: cat /etc/os-release
[2026-03-24 02:29:36] 2026-03-24 01:27:24,971 | INFO     | cat /etc/os-release:
[2026-03-24 02:29:36] NAME="CentOS Linux"
[2026-03-24 02:29:36] VERSION="7 (Core)"
[2026-03-24 02:29:36] ID="centos"
[2026-03-24 02:29:36] ID_LIKE="rhel fedora"
[2026-03-24 02:29:36] VERSION_ID="7"
[2026-03-24 02:29:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 02:29:36] ANSI_COLOR="0;31"
[2026-03-24 02:29:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 02:29:36] HOME_URL="https://www.centos.org/"
[2026-03-24 02:29:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 02:29:36] 
[2026-03-24 02:29:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 02:29:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 02:29:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 02:29:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 02:29:36] 
[2026-03-24 02:29:36] 2026-03-24 01:27:24,971 | INFO     | **************************************
[2026-03-24 02:29:36] 2026-03-24 01:27:25,474 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/2
[2026-03-24 02:29:36] 2026-03-24 01:27:25,490 | INFO     | sufficient remaining disk space (19804454912 B)
[2026-03-24 02:29:36] 2026-03-24 01:27:25,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 02:29:36] 2026-03-24 01:27:25,490 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 02:29:36] 2026-03-24 01:27:25,490 | INFO     | update_server=False
[2026-03-24 02:29:36] 2026-03-24 01:27:25,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 02:29:36] 2026-03-24 01:27:25,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 02:29:36] 2026-03-24 01:27:25,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 02:29:36] 2026-03-24 01:27:25,492 | INFO     | will abort loop
[2026-03-24 02:29:36] 2026-03-24 01:27:26,172 | INFO     | all job control threads have been joined
[2026-03-24 02:29:36] 2026-03-24 01:27:26,174 | INFO     | all data control threads have been joined
[2026-03-24 02:29:36] 2026-03-24 01:27:26,493 | INFO     | [job] retrieve thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:26,497 | INFO     | [job] job monitor thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:26,504 | INFO     | [payload] failed_post thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:26,593 | INFO     | [data] copytool_in thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:26,784 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:26,875 | INFO     | all payload control threads have been joined
[2026-03-24 02:29:36] 2026-03-24 01:27:27,177 | INFO     | [job] control thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:27,179 | INFO     | [data] control thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:27,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 02:29:36] 2026-03-24 01:27:27,496 | INFO     | [data] copytool_out thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:27,624 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:27,726 | INFO     | [job] validate thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:27,739 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:27,884 | INFO     | [payload] control thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:27,926 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:28,086 | INFO     | [payload] validate_post thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:28,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 02:29:36] 2026-03-24 01:27:28,444 | INFO     | [job] queue monitor thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:32,368 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 02:29:36] 2026-03-24 01:27:55,762 | INFO     | PID=1842057 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-24 02:29:36] 2026-03-24 01:27:55,762 | INFO     | .. there are 15 such processes running
[2026-03-24 02:29:36] 2026-03-24 01:27:55,763 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 02:29:36] 2026-03-24 01:27:55,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 02:29:36] 2026-03-24 01:27:55,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 02:29:36] 2026-03-24 01:28:22,932 | INFO     | [monitor] cgroup control has ended
[2026-03-24 02:29:36] 2026-03-24 01:28:24,325 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22424076191552)>', '<ExcThread(monitor, started 22423832626944)>']
[2026-03-24 02:29:36] 2026-03-24 01:28:24,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 02:29:36] 2026-03-24 01:28:24,879 | INFO     | [monitor] control thread has ended
[2026-03-24 02:29:36] 2026-03-24 01:28:29,349 | INFO     | all workflow threads have been joined
[2026-03-24 02:29:36] 2026-03-24 01:28:29,349 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 02:29:36] 2026-03-24 01:28:29,349 | INFO     | traces error code: 0
[2026-03-24 02:29:36] 2026-03-24 01:28:29,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 02:29:36] 2026-03-24 01:28:29,513 [wrapper] ==== pilot stdout END ====
[2026-03-24 02:29:36] 2026-03-24 01:28:29,518 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 02:29:36] 2026-03-24 01:28:29,520 [wrapper] pilotpid: 1842057
[2026-03-24 02:29:36] 2026-03-24 01:28:29,523 [wrapper] Pilot exit status: 0
[2026-03-24 02:29:36] 2026-03-24 01:28:29,532 [wrapper] pandaids: 7062258631
[2026-03-24 02:29:36] 2026-03-24 01:28:29,641 [wrapper] cleanup supervisor_pilot 2064348 1842058
[2026-03-24 02:29:36] 2026-03-24 01:28:29,643 [wrapper] Test setup, not cleaning
[2026-03-24 02:29:36] 2026-03-24 01:28:29,645 [wrapper] apfmon messages muted
[2026-03-24 02:29:36] 2026-03-24 01:28:29,646 [wrapper] ==== wrapper stdout END ====
[2026-03-24 02:29:36] 2026-03-24 01:28:29,647 [wrapper] ==== wrapper stderr END ====
[2026-03-24 02:29:36]  *** Error codes and diagnostics ***
[2026-03-24 02:29:36]     "exeErrorCode": 0,
[2026-03-24 02:29:36]     "exeErrorDiag": "",
[2026-03-24 02:29:36]     "pilotErrorCode": 0,
[2026-03-24 02:29:36]     "pilotErrorDiag": "",
[2026-03-24 02:29:36]  *** Listing of results directory ***
[2026-03-24 02:29:36] total 482592
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc    585013 Mar 22 20:50 pilot3.tar.gz
[2026-03-24 02:29:36] -rwx------. 1 boinc boinc     36322 Mar 22 20:52 runpilot2-wrapper.sh
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc      5111 Mar 22 20:55 queuedata.json
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc       100 Mar 24 01:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 02:29:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar 24 01:35 run_atlas
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc       105 Mar 24 01:35 job.xml
[2026-03-24 02:29:36] -rw-r--r--. 2 boinc boinc     15845 Mar 24 01:35 start_atlas.sh
[2026-03-24 02:29:36] drwxrwx--x. 2 boinc boinc      4096 Mar 24 01:35 shared
[2026-03-24 02:29:36] -rw-r--r--. 2 boinc boinc    597538 Mar 24 01:35 input.tar.gz
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc      6711 Mar 24 01:35 init_data.xml
[2026-03-24 02:29:36] -rw-r--r--. 2 boinc boinc 254117905 Mar 24 01:35 EVNT.49141438._000001.pool.root.1
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc         0 Mar 24 01:35 boinc_lockfile
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc      2591 Mar 24 01:35 pandaJob.out
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc   1010909 Mar 24 01:35 agis_schedconf.cvmfs.json
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc   1511579 Mar 24 01:35 agis_ddmendpoints.agis.ALL.json
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc       444 Mar 24 01:35 workernode_map.json
[2026-03-24 02:29:36] drwx------. 5 boinc boinc      4096 Mar 24 01:35 pilot3
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc 234423853 Mar 24 02:26 HITS.49282866._000035.pool.root.1
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc       528 Mar 24 02:26 boinc_task_state.xml
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc      1030 Mar 24 02:27 memory_monitor_summary.json
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc    365761 Mar 24 02:27 log.49282866._000035.job.log.tgz.1
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc      6349 Mar 24 02:27 heartbeat.json
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc        95 Mar 24 02:27 pilot_heartbeat.json
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc      4832 Mar 24 02:28 pilotlog.txt
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc    481131 Mar 24 02:28 log.49282866._000035.job.log.1
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc       357 Mar 24 02:28 output.list
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc       620 Mar 24 02:28 runtime_log
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc    860160 Mar 24 02:28 result.tar.gz
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc       663 Mar 24 02:28 tnNODmZ1dO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTT6LDm9FoVPn.diag
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc      9223 Mar 24 02:28 runtime_log.err
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc        26 Mar 24 02:29 wrapper_checkpoint.txt
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc      8192 Mar 24 02:29 boinc_mmap_file
[2026-03-24 02:29:36] -rw-r--r--. 1 boinc boinc     21280 Mar 24 02:29 stderr.txt
[2026-03-24 02:29:36] HITS file was successfully produced:
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc 234423853 Mar 24 02:26 shared/HITS.pool.root.1
[2026-03-24 02:29:36]  *** Contents of shared directory: ***
[2026-03-24 02:29:36] total 478544
[2026-03-24 02:29:36] -rw-r--r--. 2 boinc boinc     15845 Mar 24 01:35 start_atlas.sh
[2026-03-24 02:29:36] -rw-r--r--. 2 boinc boinc    597538 Mar 24 01:35 input.tar.gz
[2026-03-24 02:29:36] -rw-r--r--. 2 boinc boinc 254117905 Mar 24 01:35 ATLAS.root_0
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc 234423853 Mar 24 02:26 HITS.pool.root.1
[2026-03-24 02:29:36] -rw-------. 1 boinc boinc    860160 Mar 24 02:28 result.tar.gz
02:29:37 (1837459): run_atlas exited; CPU time 34587.873113
02:29:37 (1837459): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN