Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:06:06 (552677): wrapper (7.7.26015): starting
00:06:06 (552677): wrapper: running run_atlas (--nthreads 12)
[2026-03-24 00:06:06] Arguments: --nthreads 12
[2026-03-24 00:06:06] Threads: 12
[2026-03-24 00:06:06] Checking for CVMFS
[2026-03-24 00:06:06] No cvmfs_config command found, will try listing directly
[2026-03-24 00:06:06] CVMFS is ok
[2026-03-24 00:06:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 00:06:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 00:06:06] Further information can be found at the LHC@home message board.
[2026-03-24 00:06:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 00:06:06] Checking for apptainer binary...
[2026-03-24 00:06:06] which: no apptainer in ((null))
[2026-03-24 00:06:06] apptainer is not installed, using version from CVMFS
[2026-03-24 00:06:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 00:06:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-24 00:06:06] apptainer works
[2026-03-24 00:06:06] Set ATHENA_PROC_NUMBER=12
[2026-03-24 00:06:06] Set ATHENA_CORE_NUMBER=12
[2026-03-24 00:06:06] Starting ATLAS job with PandaID=7062249912
[2026-03-24 00:06:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 00:49:28]  *** The last 200 lines of the pilot log: ***
[2026-03-24 00:49:28]  filetype=log
[2026-03-24 00:49:28]  guid=2257a8f5-81b9-48b5-8b90-bb0ac0806282
[2026-03-24 00:49:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-24 00:49:28]  is_altstaged=None
[2026-03-24 00:49:28]  is_tar=False
[2026-03-24 00:49:28]  lfn=log.49275103._000032.job.log.tgz.1
[2026-03-24 00:49:28]  mtime=0
[2026-03-24 00:49:28]  protocol_id=None
[2026-03-24 00:49:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-24 00:49:28]  replicas=None
[2026-03-24 00:49:28]  scope=mc23_13p6TeV
[2026-03-24 00:49:28]  status=None
[2026-03-24 00:49:28]  status_code=0
[2026-03-24 00:49:28]  storage_token=
[2026-03-24 00:49:28]  surl=/var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7062249912/log.49275103._000032.job.log.tgz.1
[2026-03-24 00:49:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/c4/log.49275103._000032.job.log.tgz.1
[2026-03-24 00:49:28]  workdir=None
[2026-03-24 00:49:28] ]
[2026-03-24 00:49:28] 2026-03-23 23:48:31,403 | INFO     | transferring file log.49275103._000032.job.log.tgz.1 from /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7062249912/log.49275103._000032.job.log.tgz.1 to /var/lib/
[2026-03-24 00:49:28] 2026-03-23 23:48:31,403 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7062249912/log.49275103._000032.job.log.tgz.1 /var/lib/boinc/var/slot180/slots/1/
[2026-03-24 00:49:28] 2026-03-23 23:48:31,420 | INFO     | adding to output.list: log.49275103._000032.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/c4/log.49275103._000032.job.log.tg
[2026-03-24 00:49:28] 2026-03-23 23:48:31,421 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-24 00:49:28] 2026-03-23 23:48:31,421 | INFO     | summary of transferred files:
[2026-03-24 00:49:28] 2026-03-23 23:48:31,421 | INFO     |  -- lfn=log.49275103._000032.job.log.tgz.1, status_code=0, status=transferred
[2026-03-24 00:49:28] 2026-03-23 23:48:31,421 | INFO     | stage-out finished correctly
[2026-03-24 00:49:28] 2026-03-23 23:48:32,084 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-24 00:49:28] 2026-03-23 23:48:32,931 | INFO     | monitor loop #190: job 0:7062249912 is in state 'finished'
[2026-03-24 00:49:28] 2026-03-23 23:48:32,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-24 00:49:28] 2026-03-23 23:48:33,084 | INFO     | job 7062249912 has state=finished
[2026-03-24 00:49:28] 2026-03-23 23:48:33,085 | INFO     | preparing for final server update for job 7062249912 in state='finished'
[2026-03-24 00:49:28] 2026-03-23 23:48:33,085 | INFO     | reading metadata from: /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7062249912/jobReport.json
[2026-03-24 00:49:28] 2026-03-23 23:48:33,086 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot180/slots/1/workernode_map.json
[2026-03-24 00:49:28] 2026-03-23 23:48:33,087 | INFO     | this job has now completed (state=finished)
[2026-03-24 00:49:28] 2026-03-23 23:48:33,087 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 00:49:28] 2026-03-23 23:48:33,087 | INFO     | log transfer has been attempted: DONE
[2026-03-24 00:49:28] 2026-03-23 23:48:33,087 | INFO     | job 7062249912 has finished - writing final server update
[2026-03-24 00:49:28] 2026-03-23 23:48:33,087 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1104999/.job.ad'
[2026-03-24 00:49:28] 2026-03-23 23:48:33,087 | INFO     | total number of processed events: 400 (read)
[2026-03-24 00:49:28] 2026-03-23 23:48:33,105 | INFO     | using path: /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7062249912/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 00:49:28] 2026-03-23 23:48:33,105 | INFO     | extracted standard info from prmon json
[2026-03-24 00:49:28] 2026-03-23 23:48:33,105 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 00:49:28] 2026-03-23 23:48:33,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 00:49:28] 2026-03-23 23:48:33,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 00:49:28] 2026-03-23 23:48:33,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 00:49:28] 2026-03-23 23:48:33,106 | INFO     | fitting pss+swap vs Time
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | sum of square deviations: 13283970.0
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | sum of deviations: 277896114.0
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | mean x: 1774308543.0
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | mean y: 2731774.1142857145
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | intersect: -37115196762.06141
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | chi2: 0.00039574202482110224
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | current memory leak: 20.92 B/s (using 35 data points, chi2=0.00)
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | could have reported an average CPU frequency of 3606 MHz (5 samples)
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | ..............................
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | . Timing measurements:
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | . get job = 0 s
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | . initial setup = 4 s
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | . payload setup = 7 s
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | . stage-in = 0 s
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | . payload execution = 2510 s
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | . stage-out = 0 s
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | . log creation = 0 s
[2026-03-24 00:49:28] 2026-03-23 23:48:33,107 | INFO     | ..............................
[2026-03-24 00:49:28] 2026-03-23 23:48:33,155 | INFO     | 
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | job summary report
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | --------------------------------------------------
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | PanDA job id: 7062249912
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | task id: 49275103
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | errors: (none)
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | pilot state: finished 
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | transexitcode: 0
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | exeerrorcode: 0
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | exeerrordiag: 
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | exitcode: 0
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | exitmsg: OK
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | cpuconsumptiontime: 27143 s
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | nevents: 400
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | neventsw: 0
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | pid: 563974
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | pgrp: 563974
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | corecount: 12
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | event service: False
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | sizes: {0: 2279808, 1: 2280269, 11: 2280269, 2521: 2305473, 2522: 2314550, 2523: 2314550, 2524: 2314904}
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | --------------------------------------------------
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | 
[2026-03-24 00:49:28] 2026-03-23 23:48:33,156 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/1
[2026-03-24 00:49:28] 2026-03-23 23:48:33,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | job 7062249912 has completed (purged errors)
[2026-03-24 00:49:28] 2026-03-23 23:48:33,173 | INFO     | overall cleanup function is called
[2026-03-24 00:49:28] 2026-03-23 23:48:34,181 | INFO     | --- collectZombieJob: --- 10, [563974]
[2026-03-24 00:49:28] 2026-03-23 23:48:34,181 | INFO     | zombie collector waiting for pid 563974
[2026-03-24 00:49:28] 2026-03-23 23:48:34,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 00:49:28] 2026-03-23 23:48:34,181 | INFO     | collected zombie processes
[2026-03-24 00:49:28] 2026-03-23 23:48:34,181 | INFO     | will attempt to kill all subprocesses of pid=563974
[2026-03-24 00:49:28] 2026-03-23 23:48:34,550 | INFO     | process IDs to be killed: [563974] (in reverse order)
[2026-03-24 00:49:28] 2026-03-23 23:48:34,709 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 00:49:28] 2026-03-23 23:48:34,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 00:49:28] 2026-03-23 23:48:34,735 | INFO     | did not find any defunct processes belonging to 563974
[2026-03-24 00:49:28] 2026-03-23 23:48:34,758 | INFO     | did not find any defunct processes belonging to 563974
[2026-03-24 00:49:28] 2026-03-23 23:48:34,758 | INFO     | ready for new job
[2026-03-24 00:49:28] 2026-03-23 23:48:34,758 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 00:49:28] 2026-03-23 23:48:34,759 | INFO     | **************************************
[2026-03-24 00:49:28] 2026-03-23 23:48:34,759 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 00:49:28] 2026-03-23 23:48:34,759 | INFO     | **************************************
[2026-03-24 00:49:28] 2026-03-23 23:48:34,759 | INFO     | 
[2026-03-24 00:49:28] 2026-03-23 23:48:34,765 | INFO     | architecture information:
[2026-03-24 00:49:28] 2026-03-23 23:48:34,765 | INFO     | executing command: cat /etc/os-release
[2026-03-24 00:49:28] 2026-03-23 23:48:34,784 | INFO     | cat /etc/os-release:
[2026-03-24 00:49:28] NAME="CentOS Linux"
[2026-03-24 00:49:28] VERSION="7 (Core)"
[2026-03-24 00:49:28] ID="centos"
[2026-03-24 00:49:28] ID_LIKE="rhel fedora"
[2026-03-24 00:49:28] VERSION_ID="7"
[2026-03-24 00:49:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 00:49:28] ANSI_COLOR="0;31"
[2026-03-24 00:49:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 00:49:28] HOME_URL="https://www.centos.org/"
[2026-03-24 00:49:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 00:49:28] 
[2026-03-24 00:49:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 00:49:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 00:49:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 00:49:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 00:49:28] 
[2026-03-24 00:49:28] 2026-03-23 23:48:34,784 | INFO     | **************************************
[2026-03-24 00:49:28] 2026-03-23 23:48:35,287 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/1
[2026-03-24 00:49:28] 2026-03-23 23:48:35,302 | INFO     | sufficient remaining disk space (19878903808 B)
[2026-03-24 00:49:28] 2026-03-23 23:48:35,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 00:49:28] 2026-03-23 23:48:35,303 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 00:49:28] 2026-03-23 23:48:35,303 | INFO     | update_server=False
[2026-03-24 00:49:28] 2026-03-23 23:48:35,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 00:49:28] 2026-03-23 23:48:35,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 00:49:28] 2026-03-23 23:48:35,434 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-24 00:49:28] 2026-03-23 23:48:35,435 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-24 00:49:28] 2026-03-23 23:48:35,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 00:49:28] 2026-03-23 23:48:35,435 | INFO     | will abort loop
[2026-03-24 00:49:28] 2026-03-23 23:48:35,631 | INFO     | all job control threads have been joined
[2026-03-24 00:49:28] 2026-03-23 23:48:36,308 | INFO     | [job] retrieve thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:36,342 | INFO     | all data control threads have been joined
[2026-03-24 00:49:28] 2026-03-23 23:48:36,360 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:36,440 | INFO     | [job] job monitor thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:36,544 | INFO     | all payload control threads have been joined
[2026-03-24 00:49:28] 2026-03-23 23:48:36,636 | INFO     | [job] control thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:36,698 | INFO     | [payload] validate_post thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:36,750 | INFO     | [job] validate thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:36,897 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:37,055 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:37,082 | INFO     | [data] copytool_in thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:37,308 | INFO     | [data] copytool_out thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:37,348 | INFO     | [data] control thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:37,548 | INFO     | [payload] control thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:37,595 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:37,872 | INFO     | [payload] failed_post thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:38,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 00:49:28] 2026-03-23 23:48:38,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 00:49:28] 2026-03-23 23:48:39,169 | INFO     | [job] queue monitor thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:48:42,149 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 00:49:28] 2026-03-23 23:49:04,810 | INFO     | PID=557310 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-24 00:49:28] 2026-03-23 23:49:04,810 | INFO     | .. there are 15 such processes running
[2026-03-24 00:49:28] 2026-03-23 23:49:04,811 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 00:49:28] 2026-03-23 23:49:04,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 00:49:28] 2026-03-23 23:49:04,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 00:49:28] 2026-03-23 23:49:22,232 | INFO     | [monitor] cgroup control has ended
[2026-03-24 00:49:28] 2026-03-23 23:49:22,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22695111821120)>', '<ExcThread(monitor, started 22694802212608)>']
[2026-03-24 00:49:28] 2026-03-23 23:49:22,887 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 00:49:28] 2026-03-23 23:49:22,887 | INFO     | [monitor] control thread has ended
[2026-03-24 00:49:28] 2026-03-23 23:49:27,879 | INFO     | all workflow threads have been joined
[2026-03-24 00:49:28] 2026-03-23 23:49:27,879 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 00:49:28] 2026-03-23 23:49:27,879 | INFO     | traces error code: 0
[2026-03-24 00:49:28] 2026-03-23 23:49:27,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 00:49:28] 2026-03-23 23:49:27,995 [wrapper] ==== pilot stdout END ====
[2026-03-24 00:49:28] 2026-03-23 23:49:27,999 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 00:49:28] 2026-03-23 23:49:28,002 [wrapper] pilotpid: 557310
[2026-03-24 00:49:28] 2026-03-23 23:49:28,005 [wrapper] Pilot exit status: 0
[2026-03-24 00:49:28] 2026-03-23 23:49:28,017 [wrapper] pandaids: 7062249912
[2026-03-24 00:49:28] 2026-03-23 23:49:28,136 [wrapper] cleanup supervisor_pilot  684652 557311
[2026-03-24 00:49:28] 2026-03-23 23:49:28,140 [wrapper] Test setup, not cleaning
[2026-03-24 00:49:28] 2026-03-23 23:49:28,144 [wrapper] apfmon messages muted
[2026-03-24 00:49:28] 2026-03-23 23:49:28,148 [wrapper] ==== wrapper stdout END ====
[2026-03-24 00:49:28] 2026-03-23 23:49:28,152 [wrapper] ==== wrapper stderr END ====
[2026-03-24 00:49:28]  *** Error codes and diagnostics ***
[2026-03-24 00:49:28]     "exeErrorCode": 0,
[2026-03-24 00:49:28]     "exeErrorDiag": "",
[2026-03-24 00:49:28]     "pilotErrorCode": 0,
[2026-03-24 00:49:28]     "pilotErrorDiag": "",
[2026-03-24 00:49:28]  *** Listing of results directory ***
[2026-03-24 00:49:28] total 445688
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc    585013 Mar 22 20:50 pilot3.tar.gz
[2026-03-24 00:49:28] -rwx------. 1 boinc boinc     36322 Mar 22 20:51 runpilot2-wrapper.sh
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc      5111 Mar 22 20:52 queuedata.json
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc       100 Mar 24 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 00:49:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar 24 00:06 run_atlas
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc       105 Mar 24 00:06 job.xml
[2026-03-24 00:49:28] -rw-r--r--. 2 boinc boinc    597538 Mar 24 00:06 input.tar.gz
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc      6711 Mar 24 00:06 init_data.xml
[2026-03-24 00:49:28] -rw-r--r--. 2 boinc boinc 246045255 Mar 24 00:06 EVNT.49132355._000001.pool.root.1
[2026-03-24 00:49:28] -rw-r--r--. 2 boinc boinc     15845 Mar 24 00:06 start_atlas.sh
[2026-03-24 00:49:28] drwxrwx--x. 2 boinc boinc      4096 Mar 24 00:06 shared
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc         0 Mar 24 00:06 boinc_lockfile
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc      2599 Mar 24 00:06 pandaJob.out
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc   1010851 Mar 24 00:06 agis_schedconf.cvmfs.json
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc   1511579 Mar 24 00:06 agis_ddmendpoints.agis.ALL.json
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc       444 Mar 24 00:06 workernode_map.json
[2026-03-24 00:49:28] drwx------. 5 boinc boinc      4096 Mar 24 00:06 pilot3
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc       530 Mar 24 00:48 boinc_task_state.xml
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc 204898037 Mar 24 00:48 HITS.49275103._000032.pool.root.1
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc        95 Mar 24 00:48 pilot_heartbeat.json
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc      1028 Mar 24 00:48 memory_monitor_summary.json
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc    350866 Mar 24 00:48 log.49275103._000032.job.log.tgz.1
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc      6343 Mar 24 00:48 heartbeat.json
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc      8192 Mar 24 00:49 boinc_mmap_file
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc        27 Mar 24 00:49 wrapper_checkpoint.txt
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc      5015 Mar 24 00:49 pilotlog.txt
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc    400897 Mar 24 00:49 log.49275103._000032.job.log.1
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc       357 Mar 24 00:49 output.list
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc       620 Mar 24 00:49 runtime_log
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc    768000 Mar 24 00:49 result.tar.gz
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc      9223 Mar 24 00:49 runtime_log.err
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc       663 Mar 24 00:49 GpfMDmn0dO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6N6LDmNOKAcm.diag
[2026-03-24 00:49:28] -rw-r--r--. 1 boinc boinc     21172 Mar 24 00:49 stderr.txt
[2026-03-24 00:49:28] HITS file was successfully produced:
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc 204898037 Mar 24 00:48 shared/HITS.pool.root.1
[2026-03-24 00:49:28]  *** Contents of shared directory: ***
[2026-03-24 00:49:28] total 441736
[2026-03-24 00:49:28] -rw-r--r--. 2 boinc boinc    597538 Mar 24 00:06 input.tar.gz
[2026-03-24 00:49:28] -rw-r--r--. 2 boinc boinc 246045255 Mar 24 00:06 ATLAS.root_0
[2026-03-24 00:49:28] -rw-r--r--. 2 boinc boinc     15845 Mar 24 00:06 start_atlas.sh
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc 204898037 Mar 24 00:48 HITS.pool.root.1
[2026-03-24 00:49:28] -rw-------. 1 boinc boinc    768000 Mar 24 00:49 result.tar.gz
00:49:30 (552677): run_atlas exited; CPU time 27226.010290
00:49:30 (552677): called boinc_finish(0)

</stderr_txt>
]]>

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