Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-23 03:30:12 (3636076): vboxwrapper version 26210
2026-03-23 03:30:12 (3636076): BOINC client version: 8.2.8
2026-03-23 03:30:12 (3636076): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-03-23 03:30:12 (3636076): Successfully copied 'init_data.xml' to the shared directory.
2026-03-23 03:30:12 (3636076): Create VM. (boinc_37f9c229897681e2, slot#0)
2026-03-23 03:30:12 (3636076): Setting Memory Size for VM. (4800MB)
2026-03-23 03:30:12 (3636076): Setting CPU Count for VM. (8)
2026-03-23 03:30:13 (3636076): Setting Chipset Options for VM.
2026-03-23 03:30:13 (3636076): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-23 03:30:13 (3636076): Setting Boot Options for VM.
2026-03-23 03:30:13 (3636076): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-23 03:30:13 (3636076): Enabling VM Network Access.
2026-03-23 03:30:13 (3636076): Disabling USB Support for VM.
2026-03-23 03:30:13 (3636076): Disabling COM Port Support for VM.
2026-03-23 03:30:13 (3636076): Disabling LPT Port Support for VM.
2026-03-23 03:30:13 (3636076): Disabling Audio Support for VM.
2026-03-23 03:30:13 (3636076): Disabling Clipboard Support for VM.
2026-03-23 03:30:13 (3636076): Disabling Drag and Drop Support for VM.
2026-03-23 03:30:13 (3636076): Adding storage controller(s) to VM.
2026-03-23 03:30:13 (3636076): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-23 03:30:13 (3636076): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-23 03:30:14 (3636076): forwarding host port 56217 to guest port 80
2026-03-23 03:30:14 (3636076): Enabling remote desktop for VM.
2026-03-23 03:30:14 (3636076): Required extension pack not installed, remote desktop not enabled.
2026-03-23 03:30:14 (3636076): Enabling shared directory for VM.
2026-03-23 03:30:14 (3636076): Starting VM using VBoxManage interface. (boinc_37f9c229897681e2, slot#0)
2026-03-23 03:30:15 (3636076): Successfully started VM. (PID = '3636466')
2026-03-23 03:30:15 (3636076): Reporting VM Process ID to BOINC.
2026-03-23 03:30:15 (3636076): Guest Log: BIOS: VirtualBox 7.1.10
2026-03-23 03:30:15 (3636076): Guest Log: CPUID EDX: 0x178bfbff
2026-03-23 03:30:15 (3636076): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-23 03:30:15 (3636076): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-23 03:30:15 (3636076): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-23 03:30:15 (3636076): Detected: Web Application Enabled (http://localhost:56217)
2026-03-23 03:30:15 (3636076): Preference change detected
2026-03-23 03:30:15 (3636076): Setting CPU throttle for VM. (100%)
2026-03-23 03:30:15 (3636076): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-23 03:30:17 (3636076): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-23 03:30:17 (3636076): Guest Log: BIOS: Booting from Hard Disk...
2026-03-23 03:30:20 (3636076): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-23 03:30:20 (3636076): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-23 03:30:20 (3636076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-23 03:30:26 (3636076): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-23 03:30:26 (3636076): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-23 03:30:30 (3636076): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-23 03:30:30 (3636076): Guest Log: 00:00:00.000085 main     Log opened 2026-03-23T02:30:27.820242000Z
2026-03-23 03:30:30 (3636076): Guest Log: 00:00:00.000145 main     OS Product: Linux
2026-03-23 03:30:30 (3636076): Guest Log: 00:00:00.000158 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-23 03:30:30 (3636076): Guest Log: 00:00:00.000166 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-23 03:30:30 (3636076): Guest Log: 00:00:00.000175 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-23 03:30:30 (3636076): Guest Log: 00:00:00.000175 main     Process ID: 1371
2026-03-23 03:30:30 (3636076): Guest Log: 00:00:00.000176 main     Package type: LINUX_64BITS_GENERIC
2026-03-23 03:30:30 (3636076): Guest Log: 00:00:00.000541 main     5.2.32 r132073 started. Verbose level = 0
2026-03-23 03:30:30 (3636076): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-23 03:30:30 (3636076): Guest Log: [INFO] Mounting shared directory
2026-03-23 03:30:30 (3636076): Guest Log: [INFO] Checking for init_data.xml
2026-03-23 03:30:33 (3636076): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-23 03:30:33 (3636076): Guest Log: [INFO] Detected branch: prod
2026-03-23 03:30:33 (3636076): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-23 03:30:34 (3636076): Guest Log: Copying input files
2026-03-23 03:30:34 (3636076): Guest Log: Copied input files into RunAtlas.
2026-03-23 03:30:34 (3636076): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-23 03:30:34 (3636076): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-23 03:30:34 (3636076): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-23 03:30:34 (3636076): Guest Log: Further information can be found at the LHC@home message board.
2026-03-23 03:31:31 (3636076): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-23 03:31:31 (3636076): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-23 03:31:31 (3636076): Guest Log: 2.6.3.0 1648 0 30192 157597 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-23 03:31:31 (3636076): Guest Log: copied the webapp to /var/www
2026-03-23 03:31:31 (3636076): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-23 03:31:31 (3636076): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-23 03:31:31 (3636076): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-23 03:31:32 (3636076): Guest Log:  *** Starting ATLAS job. (PandaID=7062029701 taskID=49176683) ***
2026-03-23 04:30:19 (3636076): VM state change detected. (old = 'running', new = 'paused')
2026-03-23 05:22:38 (3636076): VM state change detected. (old = 'paused', new = 'running')
2026-03-23 05:22:46 (3636076): Guest Log: 00:59:55.350471 timesync vgsvcTimeSyncWorker: Radical host time change: 3 148 889 000 000ns (HostNow=1 774 239 706 806 000 000 ns HostLast=1 774 236 557 917 000 000 ns)
2026-03-23 05:22:56 (3636076): Guest Log: 01:00:05.352017 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 093 656 160 000ns (GuestNow=1 774 239 716 816 984 000 ns GuestLast=1 774 236 623 160 824 000 ns fSetTimeLastLoop=true )
2026-03-23 06:01:36 (3636076): Status Report: Elapsed Time: '6000.000000'
2026-03-23 06:01:36 (3636076): Status Report: CPU Time: '45174.920000'
2026-03-23 06:09:29 (3636076): Guest Log:  *** Job finished ***
2026-03-23 06:09:29 (3636076): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:12,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:18,681 [wrapper] supervise_pilot (15 min periods counter: 8)
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:26,143 | INFO     | [monitor] cgroup control has ended
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:26,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140111245948736)>', '<ExcThread(monitor, started 140110641207040)>']
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:26,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:26,693 | INFO     | [monitor] control thread has ended
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,587 | INFO     | all workflow threads have been joined
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,587 | INFO     | end of generic workflow (traces error code: 0)
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,587 | INFO     | traces error code: 0
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,645 [wrapper] ==== pilot stdout END ====
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,648 [wrapper] ==== wrapper stdout RESUME ====
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,650 [wrapper] pilotpid: 6094
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,652 [wrapper] Pilot exit status: 0
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,682 [wrapper] pandaids: 7062029701
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,698 [wrapper] cleanup supervisor_pilot 26241 6095
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,701 [wrapper] Test setup, not cleaning
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,705 [wrapper] apfmon messages muted
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,707 [wrapper] ==== wrapper stdout END ====
2026-03-23 06:09:29 (3636076): Guest Log: 2026-03-23 05:08:31,709 [wrapper] ==== wrapper stderr END ====
2026-03-23 06:09:29 (3636076): Guest Log:  *** Error codes and diagnostics ***
2026-03-23 06:09:29 (3636076): Guest Log:     "exeErrorCode": 0,
2026-03-23 06:09:29 (3636076): Guest Log:     "exeErrorDiag": "",
2026-03-23 06:09:29 (3636076): Guest Log:     "pilotErrorCode": 0,
2026-03-23 06:09:29 (3636076): Guest Log:     "pilotErrorDiag": "",
2026-03-23 06:09:29 (3636076): Guest Log:  *** Listing of results directory ***
2026-03-23 06:09:29 (3636076): Guest Log: total 234608
2026-03-23 06:09:30 (3636076): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 22 15:16 runpilot2-wrapper.sh
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 22 17:36 pilot3.tar.gz
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 22 17:38 queuedata.json
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar 23 02:30 start_atlas.sh
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 atlas atlas    597549 Mar 23 02:30 input.tar.gz
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 atlas atlas      6621 Mar 23 02:30 init_data.xml
2026-03-23 06:09:30 (3636076): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 23 02:30 EVNT.49134836._000009.pool.root.1 -> /data/./ATLAS.root_0
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 atlas atlas      2621 Mar 23 02:31 pandaJob.out
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas   1010655 Mar 23 02:31 agis_schedconf.cvmfs.json
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 23 02:31 agis_ddmendpoints.agis.ALL.json
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas       414 Mar 23 02:31 workernode_map.json
2026-03-23 06:09:30 (3636076): Guest Log: drwx------. 5 atlas atlas      4096 Mar 23 02:31 pilot3
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas 233882057 Mar 23 05:07 HITS.49176683._000272.pool.root.1
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas      1025 Mar 23 05:07 memory_monitor_summary.json
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas    348745 Mar 23 05:07 log.49176683._000272.job.log.tgz.1
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas      6283 Mar 23 05:07 heartbeat.json
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas        97 Mar 23 05:08 pilot_heartbeat.json
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 23 05:08 pilotlog.txt
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas    893877 Mar 23 05:08 log.49176683._000272.job.log.1
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas       357 Mar 23 05:08 output.list
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 23 05:08 runtime_log
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas   1259520 Mar 23 05:08 result.tar.gz
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas       666 Mar 23 05:08 TUJKDmwiZO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfU5LDmnQeKpm.diag
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 atlas atlas      8777 Mar 23 05:08 runtime_log.err
2026-03-23 06:09:30 (3636076): Guest Log: Looking for outputfile HITS.49176683._000272.pool.root.1
2026-03-23 06:09:30 (3636076): Guest Log: HITS file was successfully produced
2026-03-23 06:09:30 (3636076): Guest Log: -rw-------. 1 atlas atlas 233882057 Mar 23 05:07 /home/atlas/RunAtlas/HITS.49176683._000272.pool.root.1
2026-03-23 06:09:30 (3636076): Guest Log: Successfully finished the ATLAS job!
2026-03-23 06:09:30 (3636076): Guest Log: Copying the results back to the shared directory!
2026-03-23 06:09:30 (3636076): Guest Log:  *** Contents of shared directory: ***
2026-03-23 06:09:30 (3636076): Guest Log: total 244420
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 root root 248401050 Mar 23 02:30 ATLAS.root_0
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 root root      6621 Mar 23 02:30 init_data.xml
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 root root    597549 Mar 23 02:30 input.tar.gz
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 root root   1259520 Mar 23  2026 result.tar.gz
2026-03-23 06:09:30 (3636076): Guest Log: -rw-r--r--. 1 root root     15845 Mar 23 02:30 start_atlas.sh
2026-03-23 06:09:30 (3636076): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-23 06:09:30 (3636076): VM Completion File Detected.
2026-03-23 06:09:30 (3636076): Powering off VM.
2026-03-23 06:09:31 (3636076): Successfully stopped VM.
2026-03-23 06:09:31 (3636076): Deregistering VM. (boinc_37f9c229897681e2, slot#0)
2026-03-23 06:09:31 (3636076): Removing network bandwidth throttle group from VM.
2026-03-23 06:09:31 (3636076): Removing VM from VirtualBox.
2026-03-23 06:09:36 (3636076): called boinc_finish(0)

</stderr_txt>
]]>

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