Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-23 10:26:42 (3660909): vboxwrapper version 26210
2026-03-23 10:26:42 (3660909): BOINC client version: 8.2.8
2026-03-23 10:26:42 (3660909): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-03-23 10:26:42 (3660909): Successfully copied 'init_data.xml' to the shared directory.
2026-03-23 10:26:42 (3660909): Create VM. (boinc_cf5cd677932e363d, slot#1)
2026-03-23 10:26:42 (3660909): Setting Memory Size for VM. (4800MB)
2026-03-23 10:26:42 (3660909): Setting CPU Count for VM. (8)
2026-03-23 10:26:43 (3660909): Setting Chipset Options for VM.
2026-03-23 10:26:43 (3660909): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-23 10:26:43 (3660909): Setting Boot Options for VM.
2026-03-23 10:26:43 (3660909): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-23 10:26:43 (3660909): Enabling VM Network Access.
2026-03-23 10:26:43 (3660909): Disabling USB Support for VM.
2026-03-23 10:26:43 (3660909): Disabling COM Port Support for VM.
2026-03-23 10:26:43 (3660909): Disabling LPT Port Support for VM.
2026-03-23 10:26:43 (3660909): Disabling Audio Support for VM.
2026-03-23 10:26:43 (3660909): Disabling Clipboard Support for VM.
2026-03-23 10:26:43 (3660909): Disabling Drag and Drop Support for VM.
2026-03-23 10:26:43 (3660909): Adding storage controller(s) to VM.
2026-03-23 10:26:43 (3660909): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-23 10:26:46 (3660909): Attempts: 2
2026-03-23 10:26:47 (3660909): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-23 10:26:47 (3660909): forwarding host port 35291 to guest port 80
2026-03-23 10:26:47 (3660909): Enabling remote desktop for VM.
2026-03-23 10:26:47 (3660909): Required extension pack not installed, remote desktop not enabled.
2026-03-23 10:26:47 (3660909): Enabling shared directory for VM.
2026-03-23 10:26:47 (3660909): Starting VM using VBoxManage interface. (boinc_cf5cd677932e363d, slot#1)
2026-03-23 10:26:48 (3660909): Successfully started VM. (PID = '3661756')
2026-03-23 10:26:48 (3660909): Reporting VM Process ID to BOINC.
2026-03-23 10:26:48 (3660909): Guest Log: BIOS: VirtualBox 7.1.10
2026-03-23 10:26:48 (3660909): Guest Log: CPUID EDX: 0x178bfbff
2026-03-23 10:26:48 (3660909): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-23 10:26:48 (3660909): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-23 10:26:48 (3660909): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-23 10:26:48 (3660909): Detected: Web Application Enabled (http://localhost:35291)
2026-03-23 10:26:48 (3660909): Preference change detected
2026-03-23 10:26:48 (3660909): Setting CPU throttle for VM. (100%)
2026-03-23 10:26:48 (3660909): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-23 10:26:50 (3660909): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-23 10:26:50 (3660909): Guest Log: BIOS: Booting from Hard Disk...
2026-03-23 10:26:53 (3660909): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-23 10:26:53 (3660909): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-23 10:26:53 (3660909): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-23 10:27:01 (3660909): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-23 10:27:01 (3660909): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-23 10:27:05 (3660909): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-23 10:27:05 (3660909): Guest Log: 00:00:00.000154 main     Log opened 2026-03-23T09:27:02.853491000Z
2026-03-23 10:27:05 (3660909): Guest Log: 00:00:00.000224 main     OS Product: Linux
2026-03-23 10:27:05 (3660909): Guest Log: 00:00:00.000235 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-23 10:27:05 (3660909): Guest Log: 00:00:00.000244 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-23 10:27:05 (3660909): Guest Log: 00:00:00.000252 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-23 10:27:05 (3660909): Guest Log: 00:00:00.000253 main     Process ID: 1373
2026-03-23 10:27:05 (3660909): Guest Log: 00:00:00.000253 main     Package type: LINUX_64BITS_GENERIC
2026-03-23 10:27:05 (3660909): Guest Log: 00:00:00.000656 main     5.2.32 r132073 started. Verbose level = 0
2026-03-23 10:27:05 (3660909): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-23 10:27:05 (3660909): Guest Log: [INFO] Mounting shared directory
2026-03-23 10:27:05 (3660909): Guest Log: [INFO] Checking for init_data.xml
2026-03-23 10:27:08 (3660909): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-23 10:27:08 (3660909): Guest Log: [INFO] Detected branch: prod
2026-03-23 10:27:08 (3660909): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-23 10:27:08 (3660909): Guest Log: Copying input files
2026-03-23 10:27:09 (3660909): Guest Log: Copied input files into RunAtlas.
2026-03-23 10:27:09 (3660909): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-23 10:27:09 (3660909): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-23 10:27:09 (3660909): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-23 10:27:09 (3660909): Guest Log: Further information can be found at the LHC@home message board.
2026-03-23 10:27:19 (3660909): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-23 10:27:19 (3660909): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-23 10:27:19 (3660909): Guest Log: 2.6.3.0 1649 0 30156 157608 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-23 10:27:20 (3660909): Guest Log: copied the webapp to /var/www
2026-03-23 10:27:20 (3660909): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-23 10:27:20 (3660909): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-23 10:27:20 (3660909): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-23 10:27:20 (3660909): Guest Log:  *** Starting ATLAS job. (PandaID=7061959076 taskID=49177995) ***
2026-03-23 11:21:24 (3660909): VM state change detected. (old = 'running', new = 'paused')
2026-03-23 12:11:14 (3660909): VM state change detected. (old = 'paused', new = 'running')
2026-03-23 12:11:22 (3660909): Guest Log: 00:54:26.129663 timesync vgsvcTimeSyncWorker: Radical host time change: 2 999 400 000 000ns (HostNow=1 774 264 222 386 000 000 ns HostLast=1 774 261 222 986 000 000 ns)
2026-03-23 12:11:32 (3660909): Guest Log: 00:54:36.130719 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 943 423 826 000ns (GuestNow=1 774 264 232 396 921 000 ns GuestLast=1 774 261 288 973 095 000 ns fSetTimeLastLoop=true )
2026-03-23 12:55:39 (3660909): Status Report: Elapsed Time: '6000.000000'
2026-03-23 12:55:39 (3660909): Status Report: CPU Time: '45184.700000'
2026-03-23 12:56:55 (3660909): Guest Log:  *** Job finished ***
2026-03-23 12:56:55 (3660909): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:46,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:46,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:49,020 | INFO     | [monitor] cgroup control has ended
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:51,060 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736591226688)>', '<ExcThread(monitor, started 139735854987008)>']
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:51,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:51,616 | INFO     | [monitor] control thread has ended
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,105 | INFO     | all workflow threads have been joined
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,105 | INFO     | end of generic workflow (traces error code: 0)
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,105 | INFO     | traces error code: 0
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,168 [wrapper] ==== pilot stdout END ====
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,171 [wrapper] ==== wrapper stdout RESUME ====
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,174 [wrapper] pilotpid: 6075
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,177 [wrapper] Pilot exit status: 0
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,207 [wrapper] pandaids: 7061959076
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,224 [wrapper] cleanup supervisor_pilot 25859 6076
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,227 [wrapper] Test setup, not cleaning
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,231 [wrapper] apfmon messages muted
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,233 [wrapper] ==== wrapper stdout END ====
2026-03-23 12:56:55 (3660909): Guest Log: 2026-03-23 11:55:56,235 [wrapper] ==== wrapper stderr END ====
2026-03-23 12:56:55 (3660909): Guest Log:  *** Error codes and diagnostics ***
2026-03-23 12:56:55 (3660909): Guest Log:     "exeErrorCode": 0,
2026-03-23 12:56:55 (3660909): Guest Log:     "exeErrorDiag": "",
2026-03-23 12:56:55 (3660909): Guest Log:     "pilotErrorCode": 0,
2026-03-23 12:56:55 (3660909): Guest Log:     "pilotErrorDiag": "",
2026-03-23 12:56:55 (3660909): Guest Log:  *** Listing of results directory ***
2026-03-23 12:56:55 (3660909): Guest Log: total 219376
2026-03-23 12:56:55 (3660909): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 22 15:18 runpilot2-wrapper.sh
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 22 17:36 pilot3.tar.gz
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 22 17:44 queuedata.json
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar 23 09:27 start_atlas.sh
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 atlas atlas    597555 Mar 23 09:27 input.tar.gz
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 atlas atlas      6621 Mar 23 09:27 init_data.xml
2026-03-23 12:56:55 (3660909): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 23 09:27 EVNT.49127830._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 atlas atlas      2682 Mar 23 09:27 pandaJob.out
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas   1010858 Mar 23 09:27 agis_schedconf.cvmfs.json
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 23 09:27 agis_ddmendpoints.agis.ALL.json
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas       414 Mar 23 09:27 workernode_map.json
2026-03-23 12:56:55 (3660909): Guest Log: drwx------. 5 atlas atlas      4096 Mar 23 09:27 pilot3
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas 218414907 Mar 23 11:54 HITS.49177995._000004.pool.root.1
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas      1025 Mar 23 11:55 memory_monitor_summary.json
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas    332574 Mar 23 11:55 log.49177995._000004.job.log.tgz.1
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas      6269 Mar 23 11:55 heartbeat.json
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas        97 Mar 23 11:55 pilot_heartbeat.json
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas      5388 Mar 23 11:55 pilotlog.txt
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas    845534 Mar 23 11:55 log.49177995._000004.job.log.1
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas       357 Mar 23 11:55 output.list
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 23 11:55 runtime_log
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas   1198080 Mar 23 11:55 result.tar.gz
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas       666 Mar 23 11:55 ZenMDmwkZO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmeY5LDmyYZ7Eo.diag
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 atlas atlas      8777 Mar 23 11:55 runtime_log.err
2026-03-23 12:56:55 (3660909): Guest Log: Looking for outputfile HITS.49177995._000004.pool.root.1
2026-03-23 12:56:55 (3660909): Guest Log: HITS file was successfully produced
2026-03-23 12:56:55 (3660909): Guest Log: -rw-------. 1 atlas atlas 218414907 Mar 23 11:54 /home/atlas/RunAtlas/HITS.49177995._000004.pool.root.1
2026-03-23 12:56:55 (3660909): Guest Log: Successfully finished the ATLAS job!
2026-03-23 12:56:55 (3660909): Guest Log: Copying the results back to the shared directory!
2026-03-23 12:56:55 (3660909): Guest Log:  *** Contents of shared directory: ***
2026-03-23 12:56:55 (3660909): Guest Log: total 234732
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 root root 238535945 Mar 23 09:26 ATLAS.root_0
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 root root      6621 Mar 23 09:26 init_data.xml
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 root root    597555 Mar 23 09:26 input.tar.gz
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 root root   1198080 Mar 23  2026 result.tar.gz
2026-03-23 12:56:55 (3660909): Guest Log: -rw-r--r--. 1 root root     15845 Mar 23 09:26 start_atlas.sh
2026-03-23 12:56:55 (3660909): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-23 12:56:55 (3660909): VM Completion File Detected.
2026-03-23 12:56:55 (3660909): Powering off VM.
2026-03-23 12:56:55 (3660909): Successfully stopped VM.
2026-03-23 12:56:55 (3660909): Deregistering VM. (boinc_cf5cd677932e363d, slot#1)
2026-03-23 12:56:55 (3660909): Removing network bandwidth throttle group from VM.
2026-03-23 12:56:55 (3660909): Removing VM from VirtualBox.
2026-03-23 12:57:00 (3660909): called boinc_finish(0)

</stderr_txt>
]]>

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